SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05123
Annotation
PREDICTED:_uncharacterized_protein_LOC101736921_isoform_X1_[Bombyx_mori]
Full name
Odorant receptor      
Location in the cell
PlasmaMembrane   Reliability : 4.589
 

Sequence

CDS
ATGATTATATCTGCTTTCGGGTCACTGTTATACTACTTATTAACAAACGAATCAAGAAACGGCAACAAGAGACCTCTGTTATTCCCATTTTATATTCACGGCGTAGATTTTGGTGATACCCCAATTTATGAAATTGCTTTTACGTTTTCAAACATCTGTACTTTGGCATACGCTTATAATTATATTTTTATGATACAAACACAAATAGTGTGGGTGAGGCAAATAACATCAAAGGCGGATATTATAATATGGAACCTTCAAGATCTTTTAAGAGATATTTATCCTCCTATAAATGAAACACAGAGGGCTTATTTTTTAAATCTGATTAAACATCGAATGAGGGATATAGTAAGACAGCATCAATCGATGTACAGTCTAATGGAAGATTACTCACAAGTTTACAAAAAGTTGCTGCTTTTTGAGCAAAAATGCTGCGGTCCAGTAGTTTGTCTTACTGCATATTGTGCTACTGAGAAACTGGCTGAAGGGGAACTAAACGTAGTTCTCATTTTACTCTGTGTCGGCACGATTGTAATGCATTACATCCCTAGTCATTTGTGCACGTTCTTAACAATAAAGGTGCGTTCAATTTGCGACGCTTGTTGGGACACTCCATTCTGGAATGCGGATAAGGCTATCAGACCGTACATAGTTCTGATCATGCAAAGATCCCTAAGACCCCTACCTTTGAGAGCAGCAGGTTTCGAAGATATTTGTATTCAAACTTTTTCTAGGGTGATGACATTTTCACACGTCCATCCTTCTTATTAG
Protein
MIISAFGSLLYYLLTNESRNGNKRPLLFPFYIHGVDFGDTPIYEIAFTFSNICTLAYAYNYIFMIQTQIVWVRQITSKADIIIWNLQDLLRDIYPPINETQRAYFLNLIKHRMRDIVRQHQSMYSLMEDYSQVYKKLLLFEQKCCGPVVCLTAYCATEKLAEGELNVVLILLCVGTIVMHYIPSHLCTFLTIKVRSICDACWDTPFWNADKAIRPYIVLIMQRSLRPLPLRAAGFEDICIQTFSRVMTFSHVHPSY

Summary

Similarity
Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.
EMBL
ODYU01007153    SOQ49685.1    KY283626    AST36285.1    KY283753    AST36412.1    + More
KY707230    AVF19672.1    KY283675    AST36334.1    MG816625    AXF48810.1    KY707204    AVF19646.1    KY707197    AVF19639.1    GENK01000055    JAV45858.1    KY399308    AQQ73539.1    LC002740    BAR43488.1    JTDY01003427    KOB69576.1    KU598907    ANZ03153.1    GEDO01000042    JAP88584.1    KX655972    AOG12921.1    MH193975    AZB49421.1    KX585370    ARO70263.1    KY225507    ARO70519.1    MG546641    AYD42264.1    KX655971    AOG12920.1    KX084496    ARO76451.1    RSAL01000018    RVE52886.1    MG546604    AYD42227.1    KX655984    AOG12933.1    JN836692    AFC91732.1    KY283754    AST36413.1    MH050654    AZT78920.1    KM678331    AJE25904.1    GEDO01000043    JAP88583.1    KM892405    AJF23820.1    KX084499    ARO76454.1    KM655568    AIT72017.1    KY399271    AQQ73502.1    KM597230    AIT69907.1    GCVX01000219    JAI18011.1    LC002743    BAR43491.1    KF768697    AIG51891.1    KT588116    AOE48026.1    JN836690    AFC91730.1    JN836691    AFC91731.2    NWSH01000683    PCG74812.1    KY283756    AST36415.1    KY707238    AVF19680.1    GCVX01000218    JAI18012.1    MG816619    AXF48804.1    ODYU01002932    SOQ41046.1    LN885115    CUQ99404.1    MH723597    AYN64400.1    GENK01000054    JAV45859.1    PYGN01001060    PSN37988.1    JRES01000145    KNC33831.1    QOIP01000012    RLU16155.1    ODYU01011525    SOQ57306.1    KK107353    EZA52116.1    KQ435794    KOX73714.1    KQ434803    KZC05972.1    RLU16156.1    CM000158    EDW90779.1    MG546609    AYD42232.1    KQ435047    KZC14206.1    QOIP01000003    RLU25265.1    NWSH01002690    PCG67674.1    CH954179    EDV56325.1    KQ982585    KYQ54365.1   
Pfam
PF02949   7tm_6
Interpro
IPR004117   7tm6_olfct_rcpt       

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
256
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
40.25468
Exp number, first 60 AAs:
18.09202
Total prob of N-in:
0.01193
POSSIBLE N-term signal
sequence
outside
1  -  40
TMhelix
41  -  63
inside
64  -  164
TMhelix
165  -  182
outside
183  -  256
 
 

Population Genetic Test Statistics

Pi
319.167655
Theta
233.332873
Tajima's D
1.282402
CLR
0.357034
CSRT
0.741312934353282
Interpretation
Uncertain
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