SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05105
Pre Gene Modal
BGIBMGA012511
Annotation
PREDICTED:_arylsulfatase_B-like_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.269
 

Sequence

CDS
ATGTATAACACCATTCTATTCTTGATACTGAATTGGATAGTTAACGCTTCGACTCAACAAAAATCTCCTAATATAGTTCTTATCATTGCCGATGATTTGGGATGGGACGACGTAAGTTTTCATGGATCAGACCAAATATTGACTCCGAACATCGATCTTTTGGCATACTCTGGAAAGGCCTTGGGACGCTACTATACTCACTGTATTTGTACACCATCGAGGGCAGCTCTCTTGACCGGAAAATATGCACATCGAATCGGAATGCAGGGATACCCCTTAACGAATAGTGAAGACAGAGGTTTGCCGACGACGGAAAAAATATTGCCACAATATTTGAAAGAGTTGGGATACTCGACTCATTTGGTTGGAAAGTGGCATGTTGGACAGTCACGAACTGAATATTTACCAATGCAGAGAGGTTTCGACAGTCACTTCGGACACAGAGGTGGATATGTAGACTACTATGAGTACACATTAGACGAAACGTGGAGTACGGGAGAGGTTACAGGATTTGGATTATTTCGAAATGAAACACCTGCTTGGGACGTTGAAGGTTACCTTACAGATGTTTATACTGAAGAAGCCAAATCTGTTATCAAACTTCATGATGTAAATAAGCCGCTATTTTTGATGTTAGCCCATAACGCGCCTCACGCTGCAAATTATCCTTCCATTGTACAAGCGCCACCTGAAGACATTCGAAGTATGAAACACGTGGAATTAACGGGGCGACGAACTTATGCAGCCATGGTAAAAAAGCTGGATGAAAGTGTAGGGGAAATAGTAGAGGCTTTGTATAAGAAACAGATGCTTGAAAATACAGTTATCGTGTTCATTGCTGACAATGGCGGTATGACCTCTGGGGTTGCTATGAACTTTGCATCTAATTGGCCTCTGCGAGGACTGAAAATGTCGCCATTCGAGGGAGGCGTACGTGCCACAGGACTTGTATGGAGTTCGAGTTTTAATAATTCAAACCACTTGTGGAATGGTTTTATCCACGTGACAGATTGGCTACCAATTTTTTTGAGAATAGCAGGCTCAGAAGTACCTCTTGATATTAATGGCGTAGATCTTTGGGATGACATAAACACAAAGGATAATTCCAGGCGTGATGAAATTTATGAAATTGACGACTACACCGGTTTTGCTGCTATTATATCTCAAGATTTCAAATTAGTTTCTGGACAAGTGACATTAGAATACAGCAATTATCAGGGAGAAAACCTCAGAGGGATGATAGGGGACCCACCATCTTATGCTGATTCTGTCCAGAAGAGCAAAACGTATCGTATTCTTAAAAATATTGGGAAACCTTTTAAAAAAGAGGATGTAAACCTACGTAGAAACATTAGAGTGAAATGTAATCAAGAAATAGATAAAATATGCTATCCCGATAAAAATAAGTTTTGTTTGTATAATATTAAAGAAGATCCTTGCGAAACAAACGATCTGTCCGCGACATATCCAGATATAGCGGAAAGTATGTTGAAACGTTTACATATTGAAATATCTAAAACAATACCTAGAACAGTGCCCTTGTACAGAAATCCGGAATCTTTACCTCGTCTACACAACTTCACTTGGACAACATTTGCAGACAATTTCAAATAG
Protein
MYNTILFLILNWIVNASTQQKSPNIVLIIADDLGWDDVSFHGSDQILTPNIDLLAYSGKALGRYYTHCICTPSRAALLTGKYAHRIGMQGYPLTNSEDRGLPTTEKILPQYLKELGYSTHLVGKWHVGQSRTEYLPMQRGFDSHFGHRGGYVDYYEYTLDETWSTGEVTGFGLFRNETPAWDVEGYLTDVYTEEAKSVIKLHDVNKPLFLMLAHNAPHAANYPSIVQAPPEDIRSMKHVELTGRRTYAAMVKKLDESVGEIVEALYKKQMLENTVIVFIADNGGMTSGVAMNFASNWPLRGLKMSPFEGGVRATGLVWSSSFNNSNHLWNGFIHVTDWLPIFLRIAGSEVPLDINGVDLWDDINTKDNSRRDEIYEIDDYTGFAAIISQDFKLVSGQVTLEYSNYQGENLRGMIGDPPSYADSVQKSKTYRILKNIGKPFKKEDVNLRRNIRVKCNQEIDKICYPDKNKFCLYNIKEDPCETNDLSATYPDIAESMLKRLHIEISKTIPRTVPLYRNPESLPRLHNFTWTTFADNFK

Summary

EMBL
BABH01027988    KQ459606    KPI91353.1    KQ459896    KPJ19473.1    ODYU01005911    + More
SOQ47291.1    MG022102    AYW00831.1    MG022101    AYW00830.1    MG022103    AYW00832.1    MG022099    AYW00828.1    MG022100    AYW00829.1    MG022096    AJ489522    AYW00825.1    CAD33828.1    AJ410305    AJ410306    CAC86342.1    AJ410304    CAC86338.1    MG022098    AYW00827.1    MG022097    AYW00826.1    MG022108    AYW00837.1    KPJ19472.1    MG022105    AYW00834.1    KPI91354.1    KPJ19475.1    MG022107    AYW00836.1    MG022104    AYW00833.1    MG022109    AYW00838.1    MG022106    AYW00835.1    NEVH01015305    PNF27140.1    UFQT01001035    SSX28572.1    SSX28573.1    UFQS01001659    UFQT01001659    SSX11767.1    SSX31332.1    GEDC01012740    GEDC01012295    JAS24558.1    JAS25003.1    NEVH01004410    PNF39713.1    QOIP01000012    RLU15878.1    DS232119    EDS35430.1    KK852655    KDR19289.1    GFDL01010662    JAV24383.1    KQ971338    EFA01751.1    ODYU01010728    SOQ56015.1    AGBW02012542    OWR44858.1    DS235886    EEB20446.1    ADTU01001092    ABLF02026482    ACPB03016276    ACPB03016277    KQ983214    KYQ46561.1    EFA02301.1    NEVH01025657    PNF15107.1    KK852631    KDR19827.1    GL444248    EFN61139.1    PNF15112.1    PNF15110.1    LJIG01016161    KRT81432.1    CVRI01000054    CRL00636.1    GFDF01000493    JAV13591.1    GEBQ01003560    JAT36417.1    NWSH01000745    PCG74446.1    MG022110    AYW00839.1    GBRD01016667    GDHC01012310    JAG49160.1    JAQ06319.1    KK852665    KDR18961.1    AAAB01008986    EAL38777.3    GBRD01016664    GDHC01015135    JAG49163.1    JAQ03494.1    GEDC01030550    JAS06748.1    GBYB01004180    JAG73947.1    ADMH02001585    ETN61974.1    GGMS01011701    MBY80904.1    PNF39716.1    KDR19829.1    GECZ01012437    JAS57332.1    KK852878    KDR14503.1    GGMS01016567    MBY85770.1    SSX11770.1    SSX31335.1    KQ971345    EFA05395.2    GEZM01009631    JAV94444.1    GFXV01005138    MBW16943.1    KK852842    KDR15167.1    KQ976418    KYM89484.1    APCN01002450    KK852917    KDR13867.1    GGMR01011065    MBY23684.1    GFDF01000492    JAV13592.1    KQ414579    KOC71090.1    KQ434910    KZC11351.1    EEB20452.1    PYGN01000874    PSN39814.1    ATLV01013369    KE524854    KFB37813.1    KK107488    EZA49888.1    GDHF01032011    JAI20303.1    GDHF01022113    JAI30201.1    KX986117    ATE50179.1   
Pfam
PF00884   Sulfatase        + More
PF00106   adh_short
Interpro
IPR024607   Sulfatase_CS        + More
IPR000917   Sulfatase_N       
IPR017850   Alkaline_phosphatase_core_sf       
IPR002347   SDR_fam       
IPR036291   NAD(P)-bd_dom_sf       
SUPFAM
SSF53649   SSF53649        + More
SSF51735   SSF51735       
Gene 3D
PDB
1FSU     E-value=6.98678e-65,     Score=629

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.982055
 
 
Length:
537
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0862600000000001
Exp number, first 60 AAs:
0.00773
Total prob of N-in:
0.00295
outside
1  -  537
 
 

Population Genetic Test Statistics

Pi
238.697086
Theta
191.181361
Tajima's D
1.298623
CLR
0.000265
CSRT
0.740162991850407
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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