Gene

KWMTBOMO05101  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012513

Annotation

PREDICTED:_fasciclin-1_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr9(-):7940583-7953033      View in EpiBrowser

Full name

Fasciclin-1      

Alternative Name

Fasciclin I

Location in the cell

Peroxisomal   Reliability : 1.713

CDS

ATGGGTGAAATGGACGATAACCTCGTCCTGTACCATATATCAAACCTGGCAACCACGCTGACAAACTTGGATTATGCTATTTCTTCGGAATTAGATGGTAATCCTCCATTATGGGTGACTAGGCGTCACGATGCCATGCACGACGACATCTATGTAAACAACGCTAAAGTGTTTATTTCAAGATCATATCAATCGGTTAATCGAAACAATAAAAGACAAGTACTCCATGTGATAGATCAAGTTCTGCAGCCACTTCAGCCTCATGGTCCTGGCTCCGTCAGCTCTCCAGTCTATAGCCCTAATGCATATCAGTTTTTAGAACACTCTGATGTCTTCAATATTGGACAGCATCGCCTAAGGTCTTTCCGTCAAAAAGTGAACCAGCTACAAAAAAGCAAAGTATTTAACGCGGAGGGCCGGCATACATTCTTCATTCCAGTTGACGAAGGATTCGAGCCTGCAGCTAGGTCTGACCTGATAGATGAGAAAGTAATAGACGGTCACGTTATTCCTCACCATGTTCTATTCACGCACGCAACCCCCGACGCCAAAGAGTTTGAAACCTTGGCATTTGGAGACAATGTTAAGGTCATTGTGTCGTTCAGTACAACCATGAACGGTAAAGAGGAAATCACTTACGTTAAATCGAATACTGTGGCTGGCGACGCGAAGCATAGCCGCGGTGTTGTATTAGCCGACATTGTCCGAGCGAATATTCCGGTGAAAAATGGTGTAGTGCATCTAATCCAAAGGCCGCTGATGGTCGTAGACACGACTATCATCAACTTCTTGAAGGAAAAAGAGGATGGTCCACTATGTAAATTCTACGAAGTGCTTATGGATTTGGGACCCAACAATCAATTTTACACCGAACTCACTTTGGCTAAAGATATTACTCTGTTCGCTCCTTCAAACGAAGCATGGGCTGAACTTAGTGTTCAAAATATTATTAGAAACCATCAGAAGCTAAAAGAAATATTAAATTTGCATCTAGTACGCGAGCGACTTCCTATGGACGCCATAATCCACAACAACATGAATCAGATCTACCAAGCTCCAACGGCGCTTCCACGCAAATACTTATACTTCAATATTTTGACGCGTGGACAAAATCAAACGCTGACAGTGGAAGGTGGTGGTGTTAATGCGACAGTGATCCAACCAAATATCGCAGCAACCAATGGATTCGTACACATTATTGACCGAGTTCTCGGAGTACCTTATACTACTGTGTTTGAAAAACTAAAGGCCGACCCCATGCTTAATATCACCTACAACCTCGGCAAGAGACAAATGTTCAATCATCAGTTAAATGATATGGAACATCGCTATACATATTTCGTGCCGCGGGACCACGCCTGGTTGAAATTCCAAATTCGGCACCCTTCTGCGTACAAAGCCCTTTTCAGAGAAGACTTCGGTTATTTCACCAAGCAAATATTAGAGCGTCATGTGATTAGGGCGGGACGTGCTTACACTGTATCCGATTTAAAACTGCTCGCGAATGAAACGCATCCGTTTGTTCTACCGACCTCCCGCGATCCGCTCAGGTTGCGTGTGAAGGAATCTGATAAAAATTATTACGTCGAATGGAACGGCCACTGGATCCATGTCTTCAGACCAGATGTCGAATGCACTAATGGTATTATTCATGTCATCGACGAGCCATTCGTTTTGGAGAGCGACATCCGAGCCACAGGCGCATCTGAACGTTTAAATCTACCATTTCTCGTTCCAGTTTTGTCAGCTTCGTATTTTTTGGCTAAGCTTTTCGAGAACTAA

Protein

MGEMDDNLVLYHISNLATTLTNLDYAISSELDGNPPLWVTRRHDAMHDDIYVNNAKVFISRSYQSVNRNNKRQVLHVIDQVLQPLQPHGPGSVSSPVYSPNAYQFLEHSDVFNIGQHRLRSFRQKVNQLQKSKVFNAEGRHTFFIPVDEGFEPAARSDLIDEKVIDGHVIPHHVLFTHATPDAKEFETLAFGDNVKVIVSFSTTMNGKEEITYVKSNTVAGDAKHSRGVVLADIVRANIPVKNGVVHLIQRPLMVVDTTIINFLKEKEDGPLCKFYEVLMDLGPNNQFYTELTLAKDITLFAPSNEAWAELSVQNIIRNHQKLKEILNLHLVRERLPMDAIIHNNMNQIYQAPTALPRKYLYFNILTRGQNQTLTVEGGGVNATVIQPNIAATNGFVHIIDRVLGVPYTTVFEKLKADPMLNITYNLGKRQMFNHQLNDMEHRYTYFVPRDHAWLKFQIRHPSAYKALFREDFGYFTKQILERHVIRAGRAYTVSDLKLLANETHPFVLPTSRDPLRLRVKESDKNYYVEWNGHWIHVFRPDVECTNGIIHVIDEPFVLESDIRATGASERLNLPFLVPVLSASYFLAKLFEN

Keywords

Cell adhesion   Cell membrane   Direct protein sequencing   Glycoprotein   GPI-anchor   Lipoprotein   Membrane   Repeat   Signal   3D-structure   Alternative splicing   Complete proteome   Reference proteome  

Feature

chain  Fasciclin-1
propeptide  Removed in mature form

Uniprot

H9JSK2   A0A2H1W346   A0A3S2N7E3   A0A194RTN4   A0A194PDD7   A0A212FKH7   + More
A0A0L7L760   A0A067RJQ5   A0A2J7RE62   A0A1B6D8R0   A0A1B6D4C3   U5EXZ7   P10675   T1I277   A0A0K8T6B3   A0A026X0U6   A0A0A9VZ07   A0A195D6M1   A0A151X0F3   A0A195EW56   E0VKB2   A0A146LUE9   A0A1J1I2H7   A0A1Q3FXI7   A0A0M8ZT71   A0A3L8DPH0   A0A1W7R8Y1   A0A023EVN2   A0A1B6IKS3   A0A1B6KXP0   A0A1B6HQP4   Q0IGA9   K7J9B7   A0A0Q9WU67   A0A0Q9WV52   B4JU07   B4JRD3   A0A0C9QEX4   Q299J3   I5ANR9   B4K5G1   A0A3B0JPJ9   A0A0M4ELF4   A0A0Q9X229   A0A0Q9WG96   A0A0K8W935   A0A0Q9WI04   B4G594   A0A0K8W0F2   I5ANS0   B4NFE9   A0A034VU11   A0A0Q9XBR0   B4LXR4   A0A1W4UIR2   A0A1B0CQP8   I5ANR8   A0A0Q9WFW1   A0A0Q9X1N5   A0A0Q9WS63   A0A0Q9XAE3   A0A0R3NGV5   A0A0R3NM80   A0A0R3NHA4   A8JR25   Q9VES3   A0A1W4U721   A0A0A1XJX4   B7Z0L1   B3NZC8   A0A0K8VRV8   A0A1W4UKJ8   A0A0R3NLR6   A0A0K8UXP5   A0A0R3NM85   P10674   A0A0Q9WS25   A0A0R3NGX5   B3M2K9   A0A0P8ZYD2   A0A0Q9X1P7   A0A0Q9XDX2   A0A0R3NGR5   Q8INA9   A0A0Q9WH81   A0A0R3NGT6   A0A034VSB5   A0A0K8VRA1   A0A0R3NGM2   A0A034VNY3   A0A0Q9WRG2   A0A0Q9X1P1   A0A0Q9WTT0   A0A0Q9X8R1   A0A1W4U7M6   A0A0Q9WNQ7   A0A0Q9X2A3   A0A0Q9WG85   A0A0T6AYB0   A0A0Q9XEB0  

Pubmed

19121390    26354079    22118469    26227816    24845553    3370670    + More
2839842    24508170    25401762    20566863    26823975    30249741    24945155    17510324    20075255    17994087    15632085    18057021    25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25830018    1545245    2394715    17893096    19349973    12575939   

EMBL

BABH01028006    BABH01028007    ODYU01005890    SOQ47242.1    RSAL01000257    RVE43404.1    + More
KQ459896    KPJ19476.1    KQ459606    KPI91351.1    AGBW02008039    OWR54236.1    JTDY01002594    KOB71141.1    KK852427    KDR24081.1    NEVH01005277    PNF39115.1    GEDC01015215    JAS22083.1    GEDC01016747    JAS20551.1    GANO01002272    JAB57599.1    M20544    ACPB03024806    ACPB03024807    ACPB03024808    GBRD01005106    JAG60715.1    KK107039    EZA61917.1    GBHO01043203    JAG00401.1    KQ976760    KYN08511.1    KQ982622    KYQ53713.1    KQ981953    KYN32381.1    DS235241    EEB13818.1    GDHC01007278    JAQ11351.1    CVRI01000039    CRK94485.1    GFDL01002892    JAV32153.1    KQ435859    KOX70457.1    QOIP01000006    RLU21789.1    GEHC01000055    JAV47590.1    GAPW01000481    JAC13117.1    GECU01020185    JAS87521.1    GEBQ01023777    JAT16200.1    GECU01030699    JAS77007.1    CH477260    EAT45730.1    CH964251    KRF99717.1    KRF99716.1    CH916374    EDV91586.1    CH916373    EDV94323.1    GBYB01013058    JAG82825.1    CM000070    EAL27710.3    EIM52604.1    CH933806    EDW16187.2    OUUW01000007    SPP82843.1    CP012526    ALC46115.1    KRG01981.1    CH940650    KRF83544.1    GDHF01031020    GDHF01029756    GDHF01004765    JAI21294.1    JAI22558.1    JAI47549.1    KRF83542.1    CH479179    EDW24760.1    GDHF01007671    JAI44643.1    EIM52605.1    EDW83016.2    KRF99715.1    GAKP01013927    GAKP01013919    JAC45033.1    KRG01982.1    EDW67873.1    AJWK01023843    EIM52603.1    KRF83532.1    KRG01983.1    KRF83534.1    KRG01988.1    KRT00234.1    KRT00240.1    KRT00236.1    AE014297    ABW08688.1    BT044209    AAF55346.2    ACH92274.1    GBXI01003479    JAD10813.1    ACL83523.1    CH954181    EDV48800.1    GDHF01016667    GDHF01010736    JAI35647.1    JAI41578.1    KRT00237.1    GDHF01021184    JAI31130.1    KRT00243.1    M20545    M32311    KRF83540.1    KRT00235.1    CH902617    EDV42330.2    KPU79670.1    KRG01984.1    KRG01976.1    KRT00241.1    AAN13714.1    KRF83538.1    KRT00238.1    GAKP01013935    JAC45017.1    GDHF01010898    JAI41416.1    KRT00242.1    GAKP01013924    GAKP01013921    JAC45031.1    KRF83535.1    KRG01979.1    KRF83536.1    KRG01978.1    KRF83543.1    KRG01989.1    KRF83533.1    KRF83537.1    KRF83541.1    LJIG01022539    KRT80042.1    KRG01987.1   

Proteomes

UP000005204    UP000283053    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000027135    UP000235965    UP000015103    UP000053097    UP000078542    UP000075809    UP000078541    UP000009046    UP000183832    UP000053105    UP000279307    UP000008820    UP000002358    UP000007798    UP000001070    UP000001819    UP000009192    UP000268350    UP000092553    UP000008792    UP000008744    UP000192221    UP000092461    UP000000803    UP000008711    UP000007801   

PRIDE

H9JSK2    A8JR25    Q9VES3    B7Z0L1    P10674    Q8INA9    + More

Pfam

PF02469   Fasciclin

Interpro

IPR000782   FAS1_domain        + More
IPR036378   FAS1_dom_sf       

SUPFAM

SSF82153   SSF82153       

Gene 3D

2.30.180.10    

ProteinModelPortal

H9JSK2   A0A2H1W346   A0A3S2N7E3   A0A194RTN4   A0A194PDD7   A0A212FKH7   + More
A0A0L7L760   A0A067RJQ5   A0A2J7RE62   A0A1B6D8R0   A0A1B6D4C3   U5EXZ7   P10675   T1I277   A0A0K8T6B3   A0A026X0U6   A0A0A9VZ07   A0A195D6M1   A0A151X0F3   A0A195EW56   E0VKB2   A0A146LUE9   A0A1J1I2H7   A0A1Q3FXI7   A0A0M8ZT71   A0A3L8DPH0   A0A1W7R8Y1   A0A023EVN2   A0A1B6IKS3   A0A1B6KXP0   A0A1B6HQP4   Q0IGA9   K7J9B7   A0A0Q9WU67   A0A0Q9WV52   B4JU07   B4JRD3   A0A0C9QEX4   Q299J3   I5ANR9   B4K5G1   A0A3B0JPJ9   A0A0M4ELF4   A0A0Q9X229   A0A0Q9WG96   A0A0K8W935   A0A0Q9WI04   B4G594   A0A0K8W0F2   I5ANS0   B4NFE9   A0A034VU11   A0A0Q9XBR0   B4LXR4   A0A1W4UIR2   A0A1B0CQP8   I5ANR8   A0A0Q9WFW1   A0A0Q9X1N5   A0A0Q9WS63   A0A0Q9XAE3   A0A0R3NGV5   A0A0R3NM80   A0A0R3NHA4   A8JR25   Q9VES3   A0A1W4U721   A0A0A1XJX4   B7Z0L1   B3NZC8   A0A0K8VRV8   A0A1W4UKJ8   A0A0R3NLR6   A0A0K8UXP5   A0A0R3NM85   P10674   A0A0Q9WS25   A0A0R3NGX5   B3M2K9   A0A0P8ZYD2   A0A0Q9X1P7   A0A0Q9XDX2   A0A0R3NGR5   Q8INA9   A0A0Q9WH81   A0A0R3NGT6   A0A034VSB5   A0A0K8VRA1   A0A0R3NGM2   A0A034VNY3   A0A0Q9WRG2   A0A0Q9X1P1   A0A0Q9WTT0   A0A0Q9X8R1   A0A1W4U7M6   A0A0Q9WNQ7   A0A0Q9X2A3   A0A0Q9WG85   A0A0T6AYB0   A0A0Q9XEB0  

PDB

1O70     E-value=3.93153e-84,     Score=795

KEGG

101745995    K19897 fasciclin 1 | (RefSeq) fasciclin-1

GO

GO:0031225   GO:0007155   GO:0005886   GO:0016021   GO:0016338   GO:0007156   GO:0008038   GO:0007411   GO:0050839  

Subcellular location

Cell membrane  

Length:

593

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.27168

Exp number, first 60 AAs:

0.06276

Total prob of N-in:

0.00323

outside

1  -  593

 

 

Pi

222.392951

Theta

175.22928

Tajima's D

1.599273

CLR

0.403721

CSRT

0.804859757012149

Interpretation

Uncertain