SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05097  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012514
Annotation
PREDICTED:_tubulin-specific_chaperone_D_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.965
 

Sequence

CDS
ATGCTCGCCAACGCACTCATAGCGACAGCTTGTTTTGATCGAGAGATCAATTGCCGTCGAGCTGCATCGGCGGCGTATCAAGAAAATGTGGGACGTCATGGTATGTTCCCGCACGGCATCAATGTGCTCACAACTGCTGACTTTCAATCTGTGGGACCTAGGAACAATGCTTATCTTGTAATAGCCCCACAGATCGCTGAATATCCGGAGTACACACAGCCATTGGTCGATCATCTGGTGGAGCTGAAAGTCGATCATTGGGACTGTGCCATACGCGAACTCGCCGCCAAGGCATTGAACAAACTAACGATTAAGCTTCCGGAATACATGGCAGTGACAGTTTTACCAAAACTATTAAAAAAGACGGAGTCTATCGATTTGAACGTACGACACGGAGCAATACTGGCCATAGGTGAAACTATATACGCATTGTCACAAACAAAATTGCCCAATGGTAAAACAGCAGACAGCTTAATATCCGAGGACATCTCGACATCAGTACGTGAGCTGGTGGCGCGGTTGAGGTCCCGCCAGCAGTTCCGCGGTCTCGGAGGGGAACTGATGCGGCAGGCTTGCTGCAACTGTATAGCGTCGCTTTCGTTGGCCGCAGCACCTTACCACGGACACCCTATTATAGATGAATGGCTAAATTTAATTGAAGAATGTCTAGCTCACGAAGTGCTAGCCATAAGAGAGAAAGCAATAAAAGCTCTGCCATTGGTTTTCGATCAGTATCTTCGAGACGACCAATTGGTGTATGGTGATATGACAGCGAAAGTAAAACGCACTAAACTTATGGAGAAGTACTGCGAGCAACTTAGGAACAGTGGAGTCAATGGACTTGTGCTGAGAATGGGATACTCGCGAGCTGTTGGCGCTTTACCTAAGTTTTTGCTGACCGAACATCTCCCGATGGTCATTCGTTCGCTGATCGAATGCACGAAAGTGACGGAAGCGACGCAGAAGTGGGCGGAGGCGCGTCGCGACGCCGTCATAGGGCTAACTGAAGTGTGCCAGACGCAGGGGGTGCGGGGGGGCATCGAGGAACACGTGGACGATGTCGTGGCTGCACTCTTGGAGTGCTTAGCTGAATATACTATAGATATGAGGGGCGACATAGGCGCTTGGGTCCGGGAAGCCAGTATGTCAGGTCTACTCGCGATATGTCGACAGTGTGCCGAAGAAGCCCCGCAGTTGAACTCTCCACAAATTATCAGAGACGTGATGTGTGGCGTCGCGCAGCAGGCCGTCGAGAAAATTGACCGAACCAGAGCCCACGCGGGACGGATATTCACATCTCTCATATACAACGATCCTCCGATCTCGAACATTCCGCATCACGAAGCATTGAAACGCATATTTCCGTCCGAAGAAGTCGAGCTGAAGCCGCATCCTAAAGATATTGACGATGAAAAAGATCTGTTAACAAGCGAAAACTCAAACGTGGTGCTCTGGTTGTTCCCCGGACACACAATGCCTAGATTTGTTCAGTTATTGAACTATCCAGATTACAGGTACAGTGTGATAAAAGGACTGGTTGTCAGTGCCGGAGAGCTGACCGAGAGCTTGGTAAAACACACAACGCAATCTCTATATACGTATCTGAACACGCTGCATTCGGACAAGGAAATGCTAAAGTCTATTTGCGAGACGATCATCAAAGTTTTTGCCGATAATTTGCATGTGAAACGCATAACGGGACCGATGTTCAACTTTTTGGATCGATTATTGAGTTCAGGTTCCATATCTCCTATCCTGGAAGATCCACAGTCGAGTTTCGCGATGGACGTTCTCAAACATCTGCAGTTGGAATTACGAGGGGGCAAAAATATATACAAGCTGCTAGATTCCATAAATGTCCTTTGTCAATTAATTCAGGTCGGAGGCGGCGTCTGCAGCAAGTCCCTGGGTCAGCTCGTCATCTACCTGTGCTACGCGGACCGCTACGTGCGGCGGTGCGCGGCCGCCAGGCTCTACGAGGCGCTCACGCTCTACGGAGACGTGTGCTCCGTGCCGCAAGACAACATAGACCAGGTGATGTCCGTACTCGCTGAAACCGATTGGGAGCAAGACGTTTCCAAACTGAGGCCTATAAGAAACGAACTCTGCGATCTGATGGACATCAAACGTCCCGTGATGAAGCAAAAATAA
Protein
MLANALIATACFDREINCRRAASAAYQENVGRHGMFPHGINVLTTADFQSVGPRNNAYLVIAPQIAEYPEYTQPLVDHLVELKVDHWDCAIRELAAKALNKLTIKLPEYMAVTVLPKLLKKTESIDLNVRHGAILAIGETIYALSQTKLPNGKTADSLISEDISTSVRELVARLRSRQQFRGLGGELMRQACCNCIASLSLAAAPYHGHPIIDEWLNLIEECLAHEVLAIREKAIKALPLVFDQYLRDDQLVYGDMTAKVKRTKLMEKYCEQLRNSGVNGLVLRMGYSRAVGALPKFLLTEHLPMVIRSLIECTKVTEATQKWAEARRDAVIGLTEVCQTQGVRGGIEEHVDDVVAALLECLAEYTIDMRGDIGAWVREASMSGLLAICRQCAEEAPQLNSPQIIRDVMCGVAQQAVEKIDRTRAHAGRIFTSLIYNDPPISNIPHHEALKRIFPSEEVELKPHPKDIDDEKDLLTSENSNVVLWLFPGHTMPRFVQLLNYPDYRYSVIKGLVVSAGELTESLVKHTTQSLYTYLNTLHSDKEMLKSICETIIKVFADNLHVKRITGPMFNFLDRLLSSGSISPILEDPQSSFAMDVLKHLQLELRGGKNIYKLLDSINVLCQLIQVGGGVCSKSLGQLVIYLCYADRYVRRCAAARLYEALTLYGDVCSVPQDNIDQVMSVLAETDWEQDVSKLRPIRNELCDLMDIKRPVMKQK

Summary

EMBL
BABH01028019    BABH01028020    BABH01028021    BABH01028022    BABH01028023    BABH01028024    + More
BABH01028025    BABH01028026    ODYU01010899    SOQ56293.1    NWSH01002295    PCG68635.1    KQ459606    KPI91343.1    AGBW02014611    OWR41346.1    KQ459896    KPJ19483.1    PYGN01000031    PSN56928.1    NEVH01000003    PNF44135.1    PNF44134.1    GEZM01031220    JAV84966.1    GEDC01002555    JAS34743.1    KQ971380    EEZ97256.1    GL438128    EFN69536.1    KB632350    ERL93229.1    KQ414642    KOC66771.1    KQ434869    KZC09295.1    GFTR01008328    JAW08098.1    KK107161    EZA56576.1    QOIP01000003    RLU25214.1    GBGD01000173    JAC88716.1    KQ981276    KYN43508.1    UFQT01000015    SSX17771.1    DS235745    EEB16223.1    ADTU01024931    ADTU01024932    GL888120    EGI66989.1    ACPB03018955    ACPB03018956    CVRI01000063    CRL04336.1    KZ288349    PBC27405.1    KQ435916    KOX68775.1    KQ976719    KYM76749.1    KQ977329    KYN03554.1    KQ980159    KYN17432.1    KQ983089    KYQ47571.1    GL451091    EFN80055.1    GBYB01002243    JAG72010.1    GAMC01004382    JAC02174.1    GAMC01004381    JAC02175.1    GAKP01020538    JAC38414.1    GAKP01020536    JAC38416.1    AJVK01011653    GBXI01007005    JAD07287.1    LSYS01001520    OPJ88762.1    GDHF01020600    GDHF01008679    JAI31714.1    JAI43635.1    AKCR02000032    PKK25639.1    NEDP02004422    OWF45618.1    KL670502    KFW79471.1    LMAW01002702    KQK77914.1    KK510019    KFP62778.1    AGTO01011106    KK667148    KFQ12215.1    JRES01000438    KNC31167.1    MUZQ01000262    OWK53871.1    KA648760    AFP63389.1    KL409911    KFQ92699.1    KK943097    KFQ52251.1    ABQF01036981    ABQF01036982    ABQF01036983    ABQF01036984    ABQF01036985    ABQF01036986    ABQF01036987    KL215558    KFV65385.1    AKHW03001857    KYO40838.1    KK744609    KFP39779.1    KL522416    KFO90071.1    JXJN01021708    KL320193    KFP54724.1    KK373456    KFV44737.1    JW862077    AFO94594.1    AADN05000628    ADON01023591    ADON01023592    ADON01023593    ADON01023594    CCAG010010711    AGCU01056393    AGCU01056394    AGCU01056395    AGCU01056396    AGCU01056397    AGCU01056398    AGCU01056399    AGCU01056400    AGCU01056401    AGCU01056402    KK719561    KFO64327.1    CH902620    EDV31335.1    NNAY01000450    OXU28308.1    KK634753    KFV57741.1    JSUE03017698    JSUE03017699    JSUE03017700    JSUE03017701    CH940649    EDW63994.1    KK735702    KFR15429.1    LSMT01000064    PFX29522.1    CM001268    EHH25340.1    AABR07030942    AABR07030943    AQIB01145198    AQIB01145199    AQIB01145200    AQIB01145201    AQIB01145202    AQIB01145203    AQIB01145204    AQIB01145205    JH001222    EGW13206.1    AHAT01000593    AHAT01000594    AHAT01000595    JU336114    AFE79867.1    KL205697    KFV73089.1    JU470766    AFH27570.1   
Pfam
PF12612   TFCD_C        + More
PF03540   TFIID_30kDa
Interpro
IPR016024   ARM-type_fold        + More
IPR033162   TBCD       
IPR022577   Tubulin_specific_chaperoneD_C       
IPR011989   ARM-like       
IPR003923   TFIID_30kDa       
IPR021133   HEAT_type_2       
SUPFAM
SSF48371   SSF48371       
Gene 3D

Ontologies

Topology

Length:
716
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.00602
Exp number, first 60 AAs:
0.00092
Total prob of N-in:
0.00079
outside
1  -  716
 
 

Population Genetic Test Statistics

Pi
263.230475
Theta
177.749148
Tajima's D
1.423708
CLR
0
CSRT
0.767511624418779
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
25044914 HGIYIPNPK 95.45 2e-10
26822097 NEICDIMDIK 100.00 0.036
25044914 DVMACAQTGSGK 100.00 0.036
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号