Gene

KWMTBOMO05088

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_protein_FAM76A_[Bombyx_mori]

Location

Bomo_Chr9(+):7709054-7738128      View in EpiBrowser

Full name

Protein FAM76A      

Location in the cell

Nuclear   Reliability : 4.569

CDS

ATGAGTAACTCAACGTCAACACCTTCATTTGCGTGCTCTCGTTGCTTCGCCAGGCATCCGTTTGAGGAATTATCTCCAGGTGAACAGTTGTGCAAGGAATGCCGAGGATCATTCCCGGTCGTCAAGTGCACATACTGTCGCTCAGAATTTCAACAGACAAGTAAATCGAACACGTCGTCAATATGCAAGAAATGTGAAGCTAACGTCAAATCATATGGAAAGCCTACTGCCTGTGAATATTGTAATATTATTGCAGCGTTTATAGGAAACAAATGTCAGCGGTGTACCAATTCAGAACGTAAATATGGACCGGCGGTTACATGTGAACAATGCAAGCAAAGATGTGCTTTCGACCGACACGATGACAGTAAAAAGGTTGATGGGAAATTACTCTGCTGGCTCTGCACTCAGTCACTCAAAAGGGCGCTGGCTCGAACAAAGCAGCAGTTATCGTCTGTTGATAAACACAAGCACAGGTCTCACAAATCCAAACATGGCCACAAAGATAAACGCAAGTCCGACATGATGAAGTCGATGAACTCTGGAGATTTGTCGCTGGACTCGCAGCCTCTCGAGAAAAAATCGAAATTGAATCCATTACAAGGTGAATTGGATCCAAACAGCTCAGACCACGTCGTGGCGATGACGCAACTTAAAGAAACTATCGCTAGTTTACAAAAGAAAGTTCAACAAAAGGACATGGAGCTAATGGCGAAGGATCGTCAGATAACTGAACTAAAAGCACAACACCTAAACAATACGACCGAGATGCGCAATGACATGAAAAATAAAGAGCGTCAAAACGAGACAAAGTTCAACATGATGAACACAAAGATACAGAACCTGTTGAAGGAGGTGGCCACGCTCAGCAAGTCGGCCAAGAAGAACAAGGGCGCCAGGGCCGTGCTCGCCCACGCCGCAGAGAACAGCGGCAGCGGCACCGACAGCCCTAGCACCAACTAG

Protein

MSNSTSTPSFACSRCFARHPFEELSPGEQLCKECRGSFPVVKCTYCRSEFQQTSKSNTSSICKKCEANVKSYGKPTACEYCNIIAAFIGNKCQRCTNSERKYGPAVTCEQCKQRCAFDRHDDSKKVDGKLLCWLCTQSLKRALARTKQQLSSVDKHKHRSHKSKHGHKDKRKSDMMKSMNSGDLSLDSQPLEKKSKLNPLQGELDPNSSDHVVAMTQLKETIASLQKKVQQKDMELMAKDRQITELKAQHLNNTTEMRNDMKNKERQNETKFNMMNTKIQNLLKEVATLSKSAKKNKGARAVLAHAAENSGSGTDSPSTN

Similarity

Belongs to the FAM76 family.

Keywords

Coiled coil   Complete proteome   Reference proteome  

Feature

chain  Protein FAM76A

Uniprot

A0A2H1VKW1   A0A194RTP8   A0A194PDC4   A0A212EIQ0   A0A1E1VYT8   A0A1E1WRD8   + More
A0A1E1WDY4   D6WN11   N6T7W4   E0W3M4   A0A0L7RIP4   A0A1B0CWI8   A0A2A3EA41   V9IIB2   A0A088AHK9   A0A1Y1MP07   A0A195F2H2   F4WW67   A0A1L8DA29   A0A195B293   A0A195E6P3   A0A151XCF5   E2B5S1   A0A195CY93   E9IQH3   A0A1L8DAF3   A0A1W4WZT3   A0A154P2T2   A0A026WY98   E2B1A9   A0A1B6FVD1   A0A1B6KCF8   A0A232F6D6   A0A0C9PXZ7   A0A0M9A5X4   A0A1B6HW34   A0A1B6MV59   A0A2P8XWZ8   A0A2J7R9G5   A0A067RAR8   A0A158NLL4   A0A1B6EED8   A0A3Q0J5B7   T1HC42   A0A1B6D4M3   A0A023F4H6   A0A069DRU4   A0A0V0GDA3   A0A1B6L2I3   A0A0P4VSD3   A0A0P5YNN0   E9GD99   A0A0P5RIN5   J9KAS9   A0A0K8TH31   A0A2H8TZ15   T1IY25   A0A0L7L476   A0A0P6C2J6   A0A2P6KSN9   A0A0P5C791   A0A0P5FLW4   G1NSL2   A0A226MYH5   A0A1V4JCD5   A0A0Q3LZL9   Q5ZJ65   A0A3L8RWN0   A0A218UK25   A0A091ET36   H0YRR6   A0A3M0ITL0   A0A151NFP3   J9NS99   A0A3Q7UAP9   A0A287ARD1   A0A0K8RWT6   A0A1S3AQ78   V9KQS4   A0A250XY62   F6VMT4   A0A286XNP3   A0A341D9B8   A0A2U3V6I8   A0A3Q7MYE5   A0A340XCI2   A0A2Y9FDL7   A0A2Y9IWL4   W5NZE4   A0A2Y9LDA6   F1N6L6   A0A2U3VIP3   A0A3Q7XZ30   A0A2D4ISG4   A8K255   Q5EA89   A0A287D2I8   A0A1S3AQP6  

Pubmed

26354079    22118469    18362917    19820115    23537049    20566863    + More
28004739    21719571    20798317    21282665    24508170    30249741    28648823    29403074    24845553    21347285    25474469    26334808    21292972    26823975    26227816    21993624    15642098    30282656    20360741    22293439    16341006    30723633    25727380    24402279    28087693    19892987    20809919    19393038    16305752   

EMBL

ODYU01003124    SOQ41489.1    KQ459896    KPJ19491.1    KQ459606    KPI91336.1    + More
AGBW02014611    OWR41340.1    GDQN01011158    JAT79896.1    GDQN01001577    JAT89477.1    GDQN01005885    JAT85169.1    KQ971343    EFA04336.1    APGK01040876    KB740984    KB631899    ENN76319.1    ERL86966.1    DS235882    EEB20230.1    KQ414583    KOC70699.1    AJWK01032485    KZ288310    PBC28570.1    JR048895    AEY60795.1    GEZM01027186    JAV86808.1    KQ981864    KYN34377.1    GL888404    EGI61538.1    GFDF01010763    JAV03321.1    KQ976662    KYM78412.1    KQ979568    KYN20761.1    KQ982314    KYQ58033.1    GL445880    EFN88976.1    KQ977115    KYN05623.1    GL764790    EFZ17183.1    GFDF01010764    JAV03320.1    KQ434806    KZC06142.1    KK107063    QOIP01000005    EZA61012.1    RLU22300.1    GL444841    EFN60509.1    GECZ01015619    JAS54150.1    GEBQ01030856    JAT09121.1    NNAY01000902    OXU26008.1    GBYB01006383    JAG76150.1    KQ435727    KOX77890.1    GECU01028804    JAS78902.1    GEBQ01000159    JAT39818.1    PYGN01001222    PSN36529.1    NEVH01006591    PNF37462.1    KK852588    KDR20773.1    ADTU01019338    ADTU01019339    GEDC01000992    JAS36306.1    ACPB03006814    GEDC01016654    JAS20644.1    GBBI01002783    JAC15929.1    GBGD01002096    JAC86793.1    GECL01000813    JAP05311.1    GEBQ01022117    JAT17860.1    GDRN01101069    JAI58443.1    GDIP01055363    LRGB01000944    JAM48352.1    KZS14785.1    GL732539    EFX82731.1    GDIQ01101010    JAL50716.1    ABLF02038860    GBRD01000925    GBRD01000923    GDHC01015750    GDHC01003728    JAG64898.1    JAQ02879.1    JAQ14901.1    GFXV01007748    MBW19553.1    JH431669    JTDY01003070    KOB70205.1    GDIP01005619    JAM98096.1    MWRG01005843    PRD29361.1    GDIP01174906    JAJ48496.1    GDIQ01255085    JAJ96639.1    AAPE02033951    MCFN01000339    OXB60258.1    LSYS01008070    OPJ69851.1    LMAW01002899    KQK75919.1    AJ720569    QUSF01000149    RLV89375.1    MUZQ01000250    OWK54129.1    KK718920    KFO60136.1    ABQF01049354    QRBI01000238    RMB91170.1    AKHW03003146    KYO35646.1    AAEX03001705    AEMK02000045    DQIR01223948    HDB79425.1    GBKC01000712    JAG45358.1    JW868178    AFP00696.1    GFFV01003641    JAV36304.1    AAKN02028641    AAKN02028642    AMGL01056918    AMGL01056919    AMGL01056920    AMGL01056921    AMGL01056922    IACK01124238    LAA87170.1    AK290120    BAF82809.1    BT020680    AGTP01007877   

Proteomes

UP000053240    UP000053268    UP000007151    UP000007266    UP000019118    UP000030742    + More
UP000009046    UP000053825    UP000092461    UP000242457    UP000005203    UP000078541    UP000007755    UP000078540    UP000078492    UP000075809    UP000008237    UP000078542    UP000192223    UP000076502    UP000053097    UP000279307    UP000000311    UP000215335    UP000053105    UP000245037    UP000235965    UP000027135    UP000005205    UP000079169    UP000015103    UP000076858    UP000000305    UP000007819    UP000037510    UP000001074    UP000198323    UP000190648    UP000051836    UP000000539    UP000276834    UP000197619    UP000052976    UP000007754    UP000269221    UP000050525    UP000002254    UP000286640    UP000008227    UP000079721    UP000002281    UP000005447    UP000252040    UP000245320    UP000286641    UP000265300    UP000248484    UP000248482    UP000002356    UP000248483    UP000009136    UP000245340    UP000286642    UP000005215   

PRIDE

A8K255    Q5EA89   

Pfam

PF16046   FAM76

Interpro

IPR032017   FAM76        + More
IPR029660   FAM76A       
IPR029661   FAM76B       

ProteinModelPortal

A0A2H1VKW1   A0A194RTP8   A0A194PDC4   A0A212EIQ0   A0A1E1VYT8   A0A1E1WRD8   + More
A0A1E1WDY4   D6WN11   N6T7W4   E0W3M4   A0A0L7RIP4   A0A1B0CWI8   A0A2A3EA41   V9IIB2   A0A088AHK9   A0A1Y1MP07   A0A195F2H2   F4WW67   A0A1L8DA29   A0A195B293   A0A195E6P3   A0A151XCF5   E2B5S1   A0A195CY93   E9IQH3   A0A1L8DAF3   A0A1W4WZT3   A0A154P2T2   A0A026WY98   E2B1A9   A0A1B6FVD1   A0A1B6KCF8   A0A232F6D6   A0A0C9PXZ7   A0A0M9A5X4   A0A1B6HW34   A0A1B6MV59   A0A2P8XWZ8   A0A2J7R9G5   A0A067RAR8   A0A158NLL4   A0A1B6EED8   A0A3Q0J5B7   T1HC42   A0A1B6D4M3   A0A023F4H6   A0A069DRU4   A0A0V0GDA3   A0A1B6L2I3   A0A0P4VSD3   A0A0P5YNN0   E9GD99   A0A0P5RIN5   J9KAS9   A0A0K8TH31   A0A2H8TZ15   T1IY25   A0A0L7L476   A0A0P6C2J6   A0A2P6KSN9   A0A0P5C791   A0A0P5FLW4   G1NSL2   A0A226MYH5   A0A1V4JCD5   A0A0Q3LZL9   Q5ZJ65   A0A3L8RWN0   A0A218UK25   A0A091ET36   H0YRR6   A0A3M0ITL0   A0A151NFP3   J9NS99   A0A3Q7UAP9   A0A287ARD1   A0A0K8RWT6   A0A1S3AQ78   V9KQS4   A0A250XY62   F6VMT4   A0A286XNP3   A0A341D9B8   A0A2U3V6I8   A0A3Q7MYE5   A0A340XCI2   A0A2Y9FDL7   A0A2Y9IWL4   W5NZE4   A0A2Y9LDA6   F1N6L6   A0A2U3VIP3   A0A3Q7XZ30   A0A2D4ISG4   A8K255   Q5EA89   A0A287D2I8   A0A1S3AQP6  

KEGG

101746282    no KO assigned | (RefSeq) protein FAM76A

GO

GO:0005654  

PANTHER

PTHR46176   PTHR46176:SF2   PTHR46176:SF3  

Length:

320

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00033

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01313

outside

1  -  320

 

 

Pi

253.875517

Theta

233.188562

Tajima's D

0.68094

CLR

0.489708

CSRT

0.56277186140693

Interpretation

Uncertain