SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05082
Annotation
PREDICTED:_uncharacterized_protein_LOC106134622_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 1.708
 

Sequence

CDS
ATGATGACCATGATGATGTTCGGCGTGGTCTCCATTGGTATGGTGGTTGTGCCAATGGGATTCCAATTTCTCGCTGTCCTCGGAGGGAAAGCGCTCCTTCTTGCTAAAATGGCACTCATTCTTGCTTCCATACAAGGACTTAAAAAGGTCGCTGCTAGTCCGCTGAATTACGGTTTCTACCACACGTATCCACCCTACGAACACTTCGAGAAAAGAAGCCGTGATGATTGGCCCTCACCAGCTGTTATGCCCACCACATCGTCACCTTCAATCATTGCGCAGAGTCCCTGGTCGAATCCCGAAAATGGAAACATTAAAGCCGACAGAGTACACATAGCGAAAATTCCTCAAGAAGCCAAGAGCTCAACAAAAGAGGTGAATTGGAAGCCTGAAATACCTAAAGCCGTTAAAAAAGATTCAGAGCCAAGATTGTATCCGGTTTATAACGGACTTGCACATAGCCCCACAGCCGTCTACTCCGCCATAGATGCACCGGCTCCTCTAATAGATTTAACTACGAGACCGGGAGAAGTTCAAGCCGATCTCGCGTTAGATCTGCCGTTCAATAACTTTCGCTTTCAAAGTCCCACTCCTGTGGTTTCAGCTTGA
Protein
MMTMMMFGVVSIGMVVVPMGFQFLAVLGGKALLLAKMALILASIQGLKKVAASPLNYGFYHTYPPYEHFEKRSRDDWPSPAVMPTTSSPSIIAQSPWSNPENGNIKADRVHIAKIPQEAKSSTKEVNWKPEIPKAVKKDSEPRLYPVYNGLAHSPTAVYSAIDAPAPLIDLTTRPGEVQADLALDLPFNNFRFQSPTPVVSA

Summary

Pfam
PF07898   DUF1676
Interpro
IPR012464   DUF1676       

Ontologies

Topology

Length:
202
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.6722
Exp number, first 60 AAs:
22.66614
Total prob of N-in:
0.97486
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  202
 
 

Population Genetic Test Statistics

Pi
20.257419
Theta
13.018921
Tajima's D
1.436303
CLR
0.692959
CSRT
0.779811009449528
Interpretation
Uncertain
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