Gene

KWMTBOMO05074

Pre Gene Modal

BGIBMGA012554

Annotation

PREDICTED:_ubiquinol-cytochrome-c_reductase_complex_assembly_factor_1_[Bombyx_mori]

Location

Bomo_Chr9(-):7069190-7072487      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.133

CDS

ATGCTGAACAGCCGAGTAATAGCCCAAGTATTGTTACAACAACGACACAAAATTCGAAATATTTGTAACCCTGGAATCATCAAGTGCAATAAGATTTATCGAGAACACAGCACAGTTGCTGCTGAAGATAGCTATGTAAAGAAGTTTATGAAAGCCGTCGGATGGATGGATCAGGACAGAACTCGTTTAAAACTTACAGGTTATTTTCTATATGAAAGTATTCATGCTAATATTGTTTATGAAGAATGGTTTGAAAAGCTTGAACTTCCTGATACCCTTGCCTCCTGGTTTAGCATAACAGAACTACATGTGTGGTTGTTGATGGTCAGATACATGGCTGAGGACATAGCTCATACAGCCAAAGAGAAGAAAACATATGTTAAAGGAGATGGTCATTTTGTCAGGAATTGCATAGTAGAAGCACTGTGGGCTGATGTTTCTAGTAGGATTAAGCTATTAGAGGGTGCAAATCCATCAATTGCAAAGAAACAAGTATCAGAGCTCTCTGAACAATTTCAAGCTGCCCTTGTAGCCTACGATGAAGGTCTTAGTGATGATAAAATTTTAGCAGCAGCAATATGGAGAAGATTTTATTCATTATCAGAAAATACAGATGTTGAAAATGTAGAGAAAATTGTCAGTTTTATCAGGCGTCAGATATTAATATTAGATAAAATATCCAGTGAAGAACTAAAATGGAAACCTGAAATACCTTGGTTGAAAATTACTGATTAG

Protein

MLNSRVIAQVLLQQRHKIRNICNPGIIKCNKIYREHSTVAAEDSYVKKFMKAVGWMDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHVWLLMVRYMAEDIAHTAKEKKTYVKGDGHFVRNCIVEALWADVSSRIKLLEGANPSIAKKQVSELSEQFQAALVAYDEGLSDDKILAAAIWRRFYSLSENTDVENVEKIVSFIRRQILILDKISSEELKWKPEIPWLKITD

Uniprot

H9JSP3   S4PC72   A0A3S2TEA2   A0A194RPS5   A0A212EJR5   A0A1L8ECR4   + More
A0A1L8ECU1   A0A182SUE4   A0A182QA72   A0A182XZB2   Q16R78   A0A1I8Q2Z7   A0A182MBA1   A0A023EN99   A0A1I8MAP6   A0A0L0CJP5   A0A084VF57   A0A1Y9H2M8   Q7QJX5   A0A182X6L7   B4KZU2   A0A182I3W8   B3M9F8   B4HAY5   B4HUZ6   B4LF28   A0A0K8WF63   B4J389   A0A182PA12   A0A182U0V8   Q9VRZ7   A0A3B0KHG9   Q29F39   A0A182RB13   B4QJV1   A0A2M4ASJ0   B0WJL4   A0A1Q3FH90   B4K1A0   A0A1W4UWM5   A0A3B0JSW9   A0A1A9Z3H9   B3NFK8   B4MKU1   A0A034WKX8   A0A0M4E9I1   A0A182WIZ2   A0A1A9WT87   A0A1B0D9J3   A0A1A9VYH0   A0A2M4ASE4   B4PJT3   A0A2M4ASJ2   W5JKG3   A0A182FG22   A0A182IU92   T1EAA2   U5EFL1   W8BDE3   A0A0T6B039   A0A1A9Y9J5   A0A1B0B9D9   A0A1B0FC40   D6X4U2   A0A0K8TM97   A0A0P4W6U0   A0A1L8E0Y5   A0A1B0C880   A0A1L8E0H1   A0A1B6MHZ1   J3JWF6   U4ULY0   A0A1B6C9K3   A0A1B6IDV4   A0A1B6LGQ9   A0A0J7KT27   A0A1J1J9J5   A0A2A3E6T9   A0A1Y1MYQ4   A0A088AJH8   A0A154NWA9   A0A158NY97   A0A0N7Z8F4   A0A0A9WP02   A0A0A9Z740   A0A0M8ZQC2   A0A336MTD5   A0A336N0M6   A0A224XX89   T1HD32   E2A9I5   A0A3L8DWM4   A0A0V0GBX5   A0A1W4X7L1  

Pubmed

19121390    23622113    26354079    22118469    25244985    17510324    + More
24945155    25315136    26108605    24438588    12364791    14747013    17210077    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    22936249    25348373    17550304    20920257    23761445    24495485    18362917    19820115    26369729    22516182    23537049    28004739    21347285    27129103    25401762    26823975    20798317    30249741   

EMBL

BABH01032097    GAIX01005597    JAA86963.1    RSAL01000248    RVE43539.1    KQ459896    + More
KPJ19507.1    AGBW02014409    OWR41715.1    GFDG01002269    JAV16530.1    GFDG01002268    JAV16531.1    AXCN02000894    CH477722    EAT36901.1    AXCM01000589    GAPW01003228    JAC10370.1    JRES01000390    KNC31709.1    ATLV01012362    KE524785    KFB36601.1    AAAB01008807    EAA04372.3    CH933809    EDW17954.1    APCN01000225    CH902618    EDV41171.1    CH479246    EDW37779.1    CH480817    EDW50767.1    CH940647    EDW69197.1    GDHF01002809    JAI49505.1    CH916366    EDV96160.1    AE014296    AY071639    AAF50633.1    AAL49261.1    OUUW01000009    SPP85186.1    CH379068    EAL31233.1    CM000363    CM002912    EDX09492.1    KMY97974.1    GGFK01010416    MBW43737.1    DS231961    EDS29241.1    GFDL01008127    JAV26918.1    CH916887    EDV90438.1    SPP85185.1    CH954178    EDV50550.1    CH963847    EDW72797.2    GAKP01004162    JAC54790.1    CP012525    ALC43754.1    AJVK01012975    GGFK01010394    MBW43715.1    CM000159    EDW93682.1    GGFK01010381    MBW43702.1    ADMH02001258    ETN63370.1    GAMD01001193    JAB00398.1    GANO01003797    JAB56074.1    GAMC01007242    GAMC01007240    GAMC01007235    GAMC01007232    JAB99315.1    LJIG01016403    KRT80705.1    JXJN01010368    CCAG010016063    KQ971381    EEZ97587.1    GDAI01002111    JAI15492.1    GDRN01081906    GDRN01081905    JAI61931.1    GFDF01001929    JAV12155.1    AJWK01000255    AJWK01000256    AJWK01000257    AJWK01000258    AJWK01000259    GFDF01001938    JAV12146.1    GEBQ01004466    JAT35511.1    BT127574    AEE62536.1    KB632277    ERL91181.1    GEDC01027122    JAS10176.1    GECU01022602    JAS85104.1    GEBQ01017096    JAT22881.1    LBMM01003477    KMQ93488.1    CVRI01000075    CRL08722.1    KZ288349    PBC27410.1    GEZM01017279    GEZM01017278    GEZM01017276    GEZM01017275    JAV90802.1    KQ434771    KZC03842.1    ADTU01003508    ADTU01003509    ADTU01003510    GDKW01003499    JAI53096.1    GBHO01037034    GDHC01005246    JAG06570.1    JAQ13383.1    GBHO01003888    GBRD01003139    GDHC01003923    JAG39716.1    JAG62682.1    JAQ14706.1    KQ435916    KOX68767.1    UFQS01002630    UFQT01002630    SSX14404.1    SSX33814.1    UFQS01003052    UFQT01003052    SSX15114.1    SSX34493.1    GFTR01003296    JAW13130.1    ACPB03014781    GL437912    EFN69909.1    QOIP01000003    RLU24847.1    GECL01000638    JAP05486.1   

Proteomes

UP000005204    UP000283053    UP000053240    UP000007151    UP000075901    UP000075886    + More
UP000076408    UP000008820    UP000095300    UP000075883    UP000095301    UP000037069    UP000030765    UP000075884    UP000007062    UP000076407    UP000009192    UP000075840    UP000007801    UP000008744    UP000001292    UP000008792    UP000001070    UP000075885    UP000075902    UP000000803    UP000268350    UP000001819    UP000075900    UP000000304    UP000002320    UP000192221    UP000092445    UP000008711    UP000007798    UP000092553    UP000075920    UP000091820    UP000092462    UP000078200    UP000002282    UP000000673    UP000069272    UP000075880    UP000092443    UP000092460    UP000092444    UP000007266    UP000092461    UP000030742    UP000036403    UP000183832    UP000242457    UP000005203    UP000076502    UP000005205    UP000053105    UP000015103    UP000000311    UP000279307    UP000192223   

PRIDE

H9JSP3    Q9VRZ7   

Pfam

PF03981   Ubiq_cyt_C_chap        + More
PF02535   Zip

Interpro

IPR007129   Ubiqinol_cyt_c_chaperone_CPB3        + More
IPR021150   Ubiq_cyt_c_chap/UPF0174       
IPR003689   ZIP       

ProteinModelPortal

H9JSP3   S4PC72   A0A3S2TEA2   A0A194RPS5   A0A212EJR5   A0A1L8ECR4   + More
A0A1L8ECU1   A0A182SUE4   A0A182QA72   A0A182XZB2   Q16R78   A0A1I8Q2Z7   A0A182MBA1   A0A023EN99   A0A1I8MAP6   A0A0L0CJP5   A0A084VF57   A0A1Y9H2M8   Q7QJX5   A0A182X6L7   B4KZU2   A0A182I3W8   B3M9F8   B4HAY5   B4HUZ6   B4LF28   A0A0K8WF63   B4J389   A0A182PA12   A0A182U0V8   Q9VRZ7   A0A3B0KHG9   Q29F39   A0A182RB13   B4QJV1   A0A2M4ASJ0   B0WJL4   A0A1Q3FH90   B4K1A0   A0A1W4UWM5   A0A3B0JSW9   A0A1A9Z3H9   B3NFK8   B4MKU1   A0A034WKX8   A0A0M4E9I1   A0A182WIZ2   A0A1A9WT87   A0A1B0D9J3   A0A1A9VYH0   A0A2M4ASE4   B4PJT3   A0A2M4ASJ2   W5JKG3   A0A182FG22   A0A182IU92   T1EAA2   U5EFL1   W8BDE3   A0A0T6B039   A0A1A9Y9J5   A0A1B0B9D9   A0A1B0FC40   D6X4U2   A0A0K8TM97   A0A0P4W6U0   A0A1L8E0Y5   A0A1B0C880   A0A1L8E0H1   A0A1B6MHZ1   J3JWF6   U4ULY0   A0A1B6C9K3   A0A1B6IDV4   A0A1B6LGQ9   A0A0J7KT27   A0A1J1J9J5   A0A2A3E6T9   A0A1Y1MYQ4   A0A088AJH8   A0A154NWA9   A0A158NY97   A0A0N7Z8F4   A0A0A9WP02   A0A0A9Z740   A0A0M8ZQC2   A0A336MTD5   A0A336N0M6   A0A224XX89   T1HD32   E2A9I5   A0A3L8DWM4   A0A0V0GBX5   A0A1W4X7L1  

KEGG

101744747    K17662 cytochrome b pre-mRNA-processing protein 3 | (RefSeq) ubiquinol-cytochrome-c reductase comple

GO

GO:0034551   GO:0005739   GO:0070131   GO:0007030   GO:0016021   GO:0046873  

PANTHER

PTHR12184  

Length:

244

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.08782

Exp number, first 60 AAs:

2e-05

Total prob of N-in:

0.07368

outside

1  -  244

 

 

Pi

193.118359

Theta

165.694419

Tajima's D

0.964834

CLR

0.699122

CSRT

0.647017649117544

Interpretation

Uncertain