SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05069  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012555
Annotation
H+_transporting_ATP_synthase_beta_subunit_isoform_2_[Bombyx_mori]
Full name
ATP synthase subunit beta       + More
ATP synthase subunit beta, mitochondrial      
Location in the cell
Mitochondrial   Reliability : 2.033
 

Sequence

CDS
ATGTTTCCTACTGTCTGCAGAGTAGGCCGTTTGGCTACGAAGACAGTAGTAAACAATGCTACTGAAAAAGCATCACTGGTGACTGGAGCCGCTGTGAACAAACGTGACTATGCAGCCAAGGCTTCCGGCAAAGGGCAAGGTAAGGTAGTTGCCGTTATTGGTGCCGTAGTGGATGTTCAGTTTGAAGACAACTTGCCGCCGATCCTAAATGCCCTTGAGGTGCAAAATCGATCTCCCCGCTTGGTCTTGGAGGTGGCGCAGCACTTGGGAGAGAACACTGTACGTACCATTGCCATGGACGGTACTGAAGGCTTAGTCCGTGGGCAACCCGTACTCGACTCTGGCTCACCCATTCGTATCCCGGTGGGAGCTGAAACCCTCGGACGCATCATCAATGTAATCGGCGAACCGATTGACGAGCGCGGTCCCATCCCAACCGACAAGACTGCTGCTATCCATGCCGAAGCTCCAGAGTTTGTCGACATGTCTGTGCAGCAGGAGATTCTCGTAACTGGTATAAAAGTCGTCGATCTGCTCGCTCCTTATGCCAAAGGTGGAAAGATTGGGTTGTTTGGCGGAGCTGGTGTGGGCAAAACTGTATTGATTATGGAACTGATCAACAATGTTGCCAAAGCCCATGGTGGTTACTCTGTGTTTGCTGGAGTAGGAGAGCGTACTCGTGAAGGCAATGACTTATACCACGAGATGATTGAATCTGGTGTGATTTCTCTAAAAGACAAAACATCCAAGGTAGCTCTAGTATATGGTCAGATGAACGAACCTCCTGGTGCCCGTGCTCGTGTGGCCCTTACTGGTCTCACCGTTGCTGAATATTTCCGTGATCAAGAAGGACAGGATGTACTGCTCTTCATTGACAACATTTTCCGTTTCACTCAGGCTGGATCAGAAGTGTCTGCTCTGCTTGGTCGTATCCCATCTGCTGTAGGATATCAGCCTACTCTGGCTACTGACATGGGTACTATGCAGGAAAGAATTACCACCACCAAGAAAGGTTCCATCACATCTGTGCAGGCTATTTATGTACCAGCTGATGACTTGACTGATCCTGCTCCAGCCACCACTTTTGCTCACTTGGATGCTACCACTGTACTTTCTAGAGCCATTGCTGAATTGGGTATCTACCCAGCTGTGGATCCTCTTGACTCAACATCCCGTATCATGGACCCCAATATTATTGGAGCTGAGCACTACAATGTTGCACGTGGAGTTCAGAAAATTCTTCAGGACTACAAATCCCTGCAGGACATTATTGCTATTTTGGGTATGGACGAGTTATCTGAAGAAGACAAGTTGACAGTGGCACGTGCACGTAAAATTCAGAGGTTCCTCTCACAACCTTTCCAAGTAGCTGAGGTGTTCACTGGACATGCGGGTAAACTAGTACCACTTGAGGAAACCATCAAAGGATTCTCCAAAATTCTAGCAGGGGACTATGATCACCTACCTGAAGTTGCATTTTACATGGTTGGACCCATTGAAGAAGTTGTAGCTAAAGCAGAAACACTTGCCAAAAATGCATAA
Protein
MFPTVCRVGRLATKTVVNNATEKASLVTGAAVNKRDYAAKASGKGQGKVVAVIGAVVDVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKAETLAKNA

Summary

Description
Produces ATP from ADP in the presence of a proton gradient across the membrane.
Catalytic Activity
ATP + 4 H(+)(in) + H2O = ADP + 5 H(+)(out) + phosphate
Subunit
F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
Similarity
Belongs to the ATPase alpha/beta chains family.
Keywords
ATP synthesis   ATP-binding   Complete proteome   Hydrogen ion transport   Ion transport   Membrane   Mitochondrion   Mitochondrion inner membrane   Nucleotide-binding   Reference proteome   Transit peptide   Translocase   Transport  
Feature
chain  ATP synthase subunit beta, mitochondrial
EC Number
7.1.2.2
EMBL
BABH01032099    DQ443322    ABF51411.1    AGBW02014409    OWR41713.1    OWR41718.1    + More
KQ459896    KPJ19510.1    AK401213    KQ459606    BAM17835.1    KPI91315.1    AK402480    BAM19102.1    BABH01032096    DQ443321    ABF51410.1    KPJ19506.1    KPI91318.1    AK402408    BAM19030.1    KC018474    AFY62978.1    JTDY01004796    KOB67743.1    HM156739    ADJ95799.1    JR048957    AEY60811.1    LBMM01003998    KMQ92914.1    KQ978501    KYM93547.1    KU365964    ANJ04680.1    KZ288340    PBC27772.1    GBYB01008703    JAG78470.1    AK417201    BAN20416.1    KQ981866    KYN34049.1    KU932366    APA34002.1    KK854065    PTY10574.1    ABLF02014736    KK107054    EZA61603.1    KQ435711    KOX79538.1    KQ434796    KZC05747.1    HQ851402    AEV89780.1    GECZ01030282    JAS39487.1    DQ416018    ABD76365.1    GL452364    EFN77326.1    JRES01001407    KNC23160.1    KY563404    ARK19813.1    GL438386    EFN69064.1    KQ971344    EFA05714.1    NEVH01010480    PNF32408.1    GAMC01011671    JAB94884.1    GBBI01000645    JAC18067.1    DS235870    EEB19469.1    CH933813    EDW10924.1    GEMB01000491    JAS02636.1    GFDG01000562    JAV18237.1    GFDG01001625    JAV17174.1    ADTU01019278    CH916380    EDV90905.1    ACPB03010146    GAHY01000424    JAA77086.1    KA645220    AFP59849.1    QOIP01000004    RLU23662.1    KF724682    GBGD01001152    AHE57675.1    JAC87737.1    KX357709    AQE30075.1    KK853123    KDR11062.1    GFDG01001528    JAV17271.1    KQ983120    KYQ47240.1    CP012527    ALC48082.1    GFTR01006912    JAW09514.1    NNAY01001745    OXU23047.1    GAKP01020469    JAC38483.1    CH902659    EDV33934.1    AE014135    AGB96571.1    CH964272    EDW83581.1    GEDC01017682    JAS19616.1    KB632003    ERL87863.1    APGK01044225    BT127859    KB741021    AEE62821.1    ENN75086.1    AHN58220.1    CM000161    EDW99346.1    CH954184    EDV45213.1    X71013    AY118367    KQ978530    KYN30286.1    GAKP01020468    JAC38484.1    CM000831    ACY70473.1    GALX01004215    JAB64251.1    KQ414615    KOC68579.1    GAMC01011672    JAB94883.1    GBXI01014683    JAC99608.1    CH940665    EDW71092.1    GANO01001262    JAB58609.1    KQ976488    KYM83491.1    OUUW01000017    SPP88946.1    CH475455    EAL29273.1    CH479230    EDW36528.1    AJWK01017609    KY285053    ATP16156.1    GFDG01003404    JAV15395.1    GECL01003747    JAP02377.1    GFDF01001726    JAV12358.1    CCAG010007514    EZ424166    ADD20442.1    GDHC01006677    JAQ11952.1    GFDF01001727    JAV12357.1    GBHO01017578    JAG26026.1    KM275741    AIX97497.1    GDJX01009324    JAT58612.1    KM275711    AIX97467.1   
Pfam
PF02874   ATP-synt_ab_N        + More
PF00006   ATP-synt_ab
PF10252   PP28
Interpro
IPR004100   ATPase_F1/V1/A1_a/bsu_N        + More
IPR003593   AAA+_ATPase       
IPR005722   ATP_synth_F1_bsu       
IPR027417   P-loop_NTPase       
IPR036121   ATPase_F1/V1/A1_a/bsu_N_sf       
IPR024034   ATPase_F1/V1_b/a_C       
IPR020003   ATPase_a/bsu_AS       
IPR000194   ATPase_F1/V1/A1_a/bsu_nucl-bd       
IPR019380   Casein_kinase_sb_PP28       
SUPFAM
SSF50615   SSF50615        + More
SSF52540   SSF52540       
Gene 3D
PDB
2XND     E-value=0,     Score=1977

Ontologies

Topology

Subcellular location
Mitochondrion  
Mitochondrion inner membrane  
Length:
513
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0473000000000002
Exp number, first 60 AAs:
0.00165
Total prob of N-in:
0.00418
outside
1  -  513
 
 

Population Genetic Test Statistics

Pi
28.039224
Theta
44.036255
Tajima's D
0.438553
CLR
0.718659
CSRT
0.509124543772811
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 100.00 2e-18
28556443 IPVGAETLGR 100.00 2e-18
28556443 IPVGAETLGR 100.00 2e-18
28556443 IPVGAETLGR 100.00 2e-18
28556443 GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 100.00 1e-17
28556443 FTQAGSEVSALLGR 100.00 1e-17
28556443 GQPVLDSGSPIR 100.00 1e-17
28556443 GQPVLDSGSPIR 100.00 1e-17
28556443 IINVIGEPIDER 100.00 1e-11
28556443 IINVIGEPIDER 100.00 1e-11
28556443 TAAIHAEAPEFVDMSVQQEILVTGIK 100.00 6e-11
28556443 TAAIHAEAPEFVDMSVQQEILVTGIK 100.00 6e-11
28556443 TAAIHAEAPEFVDMSVQQEILVTGIK 100.00 6e-11
28556443 TAAIHAEAPEFVDMSVQQEILVTGIK 100.00 6e-11
28556443 TAAIHAEAPEFVDMSVQQEILVTGIK 100.00 6e-11
28556443 TAAIHAEAPEFVDMSVQQEILVTGIK 100.00 6e-11
28556443 TAAIHAEAPEFVDM 100.00 6e-11
28556443 QVAEVFTGHAGK 100.00 6e-11
26822097 EGNDIYHEMIESGVISIKDK 96.15 1e-10
26280517 SVSAFAAICNPSACPWGVK 96.15 1e-10
27102218 TREGNDIYHEMIESGVISIKDK 96.15 1e-10
28467696 TAAFIVPIINQMYEAGPVK 96.15 1e-10
27530593 KAFGLSSPVSSSIPITPSDTNARV 100.00 9e-10
28556443 IPSAVGYQPTLATDMGTMQER 100.00 2e-08
28556443 IPSAVGYQPTLATDMGTMQER 100.00 2e-08
28556443 IPSAVGYQPTLATDMGTMQER 100.00 2e-08
28556443 IPSAVGYQPTLATDMGTMQER 100.00 2e-08
28556443 IPSAVGYQPTLATDMGTMQER 100.00 2e-08
28556443 IPSAVGYQPTLATDMGTMQER 100.00 2e-08
28556443 IPSAVGYQPTLATDMGTMQER 100.00 2e-08
28556443 IPSAVGYQPTLATDMGTMQER 100.00 2e-08
28556443 IPSAVGYQPTLATDMGTMQER 100.00 2e-08
28556443 IPSAVGYQPTLATDMGTMQER 100.00 2e-08
28556443 IPSAVGYQPTLATDMGTMQER 100.00 2e-08
28556443 IPSAVGYQPTLATDMGTMQER 100.00 2e-08
28556443 IPSAVGYQPTLATDMGTMQER 100.00 2e-08
28556443 IMDPNIIGAEHYNVARG 100.00 2e-08
28556443 IMDPNIIGAEHYNVAR 100.00 2e-08
26822097 TVIIMEIINNVAK 95.24 5e-08
26280517 IPGTIYTAAEEIEAIGGK 95.24 5e-08
27102218 KFDSEPDHCWR 95.24 5e-08
28467696 IPSAVADNAGYDSADIIAR 95.24 5e-08
28556443 TREGNDLYHEMIESGVISLK 100.00 1e-07
28556443 TREGNDLYHEMIESGVISLK 100.00 1e-07
28556443 TIAMDGTEGLVR 100.00 1e-07
28556443 TIAMDGTEGLVR 100.00 1e-07
28556443 LVLEVAQHLGENTVR 100.00 4e-07
28556443 MVGPIEEVVAK 100.00 4e-07
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHA 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGHAGK 100.00 1e-06
28556443 FLSQPFQVAEVFTGH 100.00 1e-06
28556443 FLSQPFQVAEVFTGH 100.00 1e-06
26822097 GQPVIDSGSPIRIPVGAETIGR 100.00 2e-06
26280517 IINSNIWEADPEIFDIIVK 100.00 2e-06
27102218 GQPVIDSGSPIR 100.00 2e-06
28467696 IINVIGEPIDER 100.00 2e-06
21761556 VVDLLAPYAK 100.00 3e-06
28556443 AIAELGIYPAVDPLDSTSR 100.00 3e-06
28556443 AIAELGIYPAVDPLDSTSR 100.00 3e-06
28556443 AIAELGIYPAVDPLDSTSR 100.00 3e-06
28556443 AIAELGIYPAVDPLDSTSR 100.00 3e-06
28556443 AIAELGIYPAVDPLDSTSR 100.00 3e-06
28556443 AHGGYSVFAGVGER 100.00 3e-06
28556443 AIAELGIYPAVDPLDSTSR 100.00 3e-06
28556443 AIAELGIYPAVDPLDSTSR 100.00 3e-06
28556443 AIAELGIYPAVDPLDSTSR 100.00 3e-06
28556443 AIAELGIYPAVDPLDSTSR 100.00 3e-06
28556443 AHGGYSVFAGVGER 100.00 3e-06
28556443 AHGGYSVFAGVGER 100.00 3e-06
28556443 EGNDLYHEMIESGVISLK 100.00 3e-06
28556443 EGNDLYHEMIESGVISLK 100.00 3e-06
28556443 EGNDLYHEMIESGVISLK 100.00 3e-06
28556443 AIAELGIYPAVDPLDSTSR 100.00 3e-06
28556443 AIAELGIYPAVDPLDSTSR 100.00 3e-06
28556443 IMDPNIIGAEHYNVAR 100.00 7e-06
28556443 LFIDNIFR 100.00 2e-05
28556443 KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 100.00 2e-05
26822097 RIYDQGGEQAIK 100.00 4e-05
26280517 GYDPSKDAINAAAK 100.00 4e-05
25044914 IMDNFSNYSAWHYR 100.00 4e-05
27102218 IINVIGEPIDER 100.00 4e-05
28467696 IMDHISDAEHYR 100.00 4e-05
28556443 IMDPNIIGAEHYNVAR 100.00 4e-05
28556443 IMDPNIIGAEHYNVAR 100.00 4e-05
28556443 IMDPNIIGAEHYNVAR 100.00 4e-05
28556443 IMDPNIIGAEHYNVAR 100.00 4e-05
28556443 IMDPNIIGAEHYNVAR 100.00 4e-05
28556443 IMDPNIIGAEHYNVAR 100.00 4e-05
28556443 IMDPNIIGAEHYNVAR 100.00 4e-05
28556443 IMDPNIIGAEHYNVAR 100.00 4e-05
28556443 IMDPNIIGAEHYNVAR 100.00 4e-05
28556443 IMDPNIIGAEHYNVAR 100.00 4e-05
28556443 IMDPNIIGAEHYN 100.00 4e-05
28556443 IMDPNIIGAEHYN 100.00 4e-05
28556443 FLSQPFQVAEVFTGH 100.00 5e-05
28556443 TAAIHAEAPEFVDM 100.00 5e-05
28556443 FLSQPFQVAEVFTGH 100.00 1e-04
28556443 FLSQPFQVAEVFTGH 100.00 1e-04
28556443 FLSQPFQVAEVF 100.00 1e-04
28556443 FLSQPFQVAEVFTGH 100.00 1e-04
28556443 FLSQPFQVAEVF 100.00 1e-04
28556443 EGNDLYHEMIESGVISLK 100.00 1e-04
21761556 IGLFGGAGVGK 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQM 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALVYGQMNEPPGAR 100.00 3e-04
28556443 VALTGLTVAEYFR 100.00 3e-04
28556443 VALTGLTVAEYFR 100.00 3e-04
28556443 TVLIMELINNVAK 100.00 8e-04
28556443 VVDLLAPY 100.00 8e-04
26822097 VAIVYGQMNEPPGAR 100.00 9e-04
26280517 IVFPPDYPISPPK 100.00 9e-04
28467696 AHFDAPPPPR 100.00 9e-04
28556443 AHGGYSVFAGVGER 100.00 9e-04
28556443 AHGGYSVFAGVGER 100.00 9e-04
28556443 AHGGYSVFAGVGER 100.00 9e-04
28556443 AAKAAAAANGK 100.00 9e-04
28556443 AHGGYSVFAGVGER 100.00 9e-04
28556443 AHGGYSVFAGVGER 100.00 9e-04
28556443 GVQKILQDYK 100.00 9e-04
28556443 YTEDEELNK 100.00 9e-04
28556443 IINVIGEPIDER 100.00 0.001
28556443 TVLIMELINNVAKAHG 100.00 0.001
28556443 ILAGDYDHLPEVAFYMVGPIEEVVAK 100.00 0.002
28556443 ILAGDYDHLPEVAFYMVGPIEEVVAK 100.00 0.002
28556443 LVLEVAQHLGENTVR 100.00 0.002
28556443 LVLEVAQHLGENTVR 100.00 0.002
28556443 LVLEVAQHLGENTVR 100.00 0.002
28556443 LVLEVAQHLGENTVR 100.00 0.002
28556443 LVLEVAQHLGENTVR 100.00 0.002
28556443 LVLEVAQHLGENTVR 100.00 0.002
28556443 LSQPFQVAEVFTGHAGK 100.00 0.002
28556443 LVLEVAQHLGENTVR 100.00 0.002
28556443 LVLEVAQHLGENTVR 100.00 0.002
28556443 LVLEVAQHLGENTVR 100.00 0.002
28556443 LVLEVAQHLGENTVR 100.00 0.002
28556443 LVLEVAQHLGENTVR 100.00 0.002
28556443 LATDMGTMQER 100.00 0.002
28556443 ILAGDYDHLPEVAF 100.00 0.002
28556443 QVAEVFTGHAGK 100.00 0.005
28556443 VVDLLAPYAK 100.00 0.005
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