SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05067
Annotation
PREDICTED:_coiled-coil_domain-containing_protein_58_[Amyelois_transitella]
Full name
Coiled-coil domain-containing protein 58      
Location in the cell
Cytoplasmic   Reliability : 1.606 Nuclear   Reliability : 2.136
 

Sequence

CDS
ATGATTTGTCCGGATTTTTTAGAATTTCAGGACATCCTGAAGAAGATGAGGATACTTGATGATAAAATAGTATATGCCTTAAATACGTCAATTCCGACAGAGTCATTTAAAGCTAAAATTGATGCTACTGCAGCTTGTCATGATCTTTACTCTCAGATACGAACAGGGCATTCTGAAAGGGAAAATGTAATAAAAAATTGTATACTGGCAACTGCAGAATCAGTAAAAAAGCTAAAAGCAGTCAAAGAAGAAAAACCTAATGATTTAGAAGTTTTGAGAAACTTGAAAGCGGAGCAAAAAAAGTTGAGACTTCTTCAAACTGAACTTAGTGTAGAAGAAGTTATTCAAGAAAAGACAACAAAACTCTTTACAGAAAAATGTAGAAGCTACTATAAGCCCTGA
Protein
MICPDFLEFQDILKKMRILDDKIVYALNTSIPTESFKAKIDATAACHDLYSQIRTGHSERENVIKNCILATAESVKKLKAVKEEKPNDLEVLRNLKAEQKKLRLLQTELSVEEVIQEKTTKLFTEKCRSYYKP

Summary

Similarity
Belongs to the CCDC58 family.
Keywords
Acetylation   Coiled coil   Complete proteome   Reference proteome  
Feature
chain  Coiled-coil domain-containing protein 58
EMBL
ODYU01011211    SOQ56808.1    RSAL01000007    RVE54049.1    AGBW02014409    OWR41720.1    + More
KQ459606    KPI91313.1    KQ459896    KPJ19512.1    GAIX01006042    JAA86518.1    JTDY01004796    KOB67744.1    PYGN01000474    PSN45690.1    GBYB01014124    JAG83891.1    AJWK01029172    JRES01000005    KNC34973.1    ADMH02000839    ETN64893.1    AAAB01008960    EAA11774.4    APCN01004391    GGFK01008899    MBW42220.1    KK852898    KDR14156.1    AXCM01001478    GGFJ01010490    MBW59631.1    NNAY01001049    OXU25337.1    AXCN02000347    GBGD01003413    JAC85476.1    GDKW01002473    JAI54122.1    ACPB03011089    GAHY01002099    JAA75411.1    GAMD01002569    JAA99021.1    UFQS01000007    UFQT01000007    SSW97118.1    SSX17504.1    CP012525    ALC44175.1    GFDF01010156    JAV03928.1    LJIJ01005821    ODM87235.1    MRZV01000313    PIK52806.1    JXUM01073561    GAPW01005739    KQ562782    JAC07859.1    KXJ75136.1    KZ288262    PBC30396.1    GL732546    EFX80714.1    GDIQ01024072    JAN70665.1    CH477702    EAT37061.1    CH916366    EDV97517.1    GL888558    EGI59524.1    KQ435775    KOX74994.1    AAGJ04173329    LSMT01000009    PFX33669.1    GL440275    EFN66065.1    OUUW01000002    SPP77243.1    GFDL01002948    JAV32097.1    GANO01002959    JAB56912.1    CH479226    EDW35234.1    GFDL01003728    JAV31317.1    CH940647    EDW70841.1    CH379069    EAL31134.2    GBYB01008300    JAG78067.1    AGTP01049958    ACTA01058179    GDHF01011318    JAI40996.1    AEYP01017707    HACG01033536    CEK80401.1    CH933809    EDW19229.1    AKHW03006817    KYO18429.1    GBHO01035821    GBRD01006187    GDHC01009731    JAG07783.1    JAG59634.1    JAQ08898.1    CH963847    EDW73346.1    AAEX03017026    LMAW01002686    KQK78171.1    APGK01043560    KB741015    KB632161    ENN75320.1    ERL89242.1    CM000363    CM002912    EDX11124.1    KMZ00609.1    CH954178    EDV52412.1    ADTU01008424    CH902618    EDV41100.1    BC114911    CM001277    EHH51080.1    JH167067    EHB00957.1    AQIA01040601   
Proteomes
UP000283053    UP000007151    UP000053268    UP000053240    UP000037510    UP000245037    + More
UP000092461    UP000095300    UP000037069    UP000075881    UP000000673    UP000075903    UP000075902    UP000075882    UP000076407    UP000007062    UP000075840    UP000075901    UP000092445    UP000075920    UP000076408    UP000027135    UP000002358    UP000075883    UP000215335    UP000075886    UP000075885    UP000075900    UP000069272    UP000095301    UP000015103    UP000092553    UP000094527    UP000230750    UP000069940    UP000249989    UP000242457    UP000000305    UP000008820    UP000005203    UP000001070    UP000007755    UP000053105    UP000076420    UP000007110    UP000225706    UP000000311    UP000268350    UP000192221    UP000008744    UP000008792    UP000001819    UP000005215    UP000261680    UP000291021    UP000008912    UP000286642    UP000000715    UP000248482    UP000286640    UP000233020    UP000008225    UP000009192    UP000050525    UP000007798    UP000233040    UP000002254    UP000051836    UP000019118    UP000030742    UP000000304    UP000286641    UP000248481    UP000245341    UP000245340    UP000008711    UP000081671    UP000248484    UP000005205    UP000007801    UP000009136    UP000009130    UP000006813    UP000233120    UP000233100   
Pfam
PF09774   Cid2
Interpro
IPR019171   Caffeine_induced_death_Cid2       

Ontologies

GO

Topology

Length:
133
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.04540
outside
1  -  133
 
 

Population Genetic Test Statistics

Pi
57.178211
Theta
39.662171
Tajima's D
-0.744399
CLR
9.053709
CSRT
0.189240537973101
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号