Gene

KWMTBOMO05066  Validated by peptides from experiments

Annotation

UPF0389_protein_[Operophtera_brumata]

Location

Bomo_Chr9(+):7028908-7029920      View in EpiBrowser

Full name

UPF0389 protein CG9231       + More
UPF0389 protein GA21628      

Location in the cell

Nuclear   Reliability : 2.415

CDS

ATGTGTTCATCTTCACCGACAGGACCCAGTTCAACAGGTCCATCATCATCATCTATGTCTCATAGATTTCGACCGACAGAATTTCAGAAAACGATTCTTGTGTGGACAAAAAAATACAAGAACAAATCTGAAGTCCCTCCATTTGTATCAGCTGAAATTATTGAAAGATCTAAGAGTGAAGCTAGAATCAAAATTTCAAATGTGCTTATGCTTCTTACTGCTTTGGCAAGTTTTGGAGCAATATTGTCTGGGAAAGCTGCTGCTAAGAGAGGGGAATCTGTTCATCAGATGAATCTTGACTGGCATAAAAAATATCAAGAAGAACATAAAGAAAAAAGTAGTGCAAAGTAA

Protein

MCSSSPTGPSSTGPSSSSMSHRFRPTEFQKTILVWTKKYKNKSEVPPFVSAEIIERSKSEARIKISNVLMLLTALASFGAILSGKAAAKRGESVHQMNLDWHKKYQEEHKEKSSAK

Similarity

Belongs to the UPF0389 family.

Keywords

Complete proteome   Glycoprotein   Membrane   Reference proteome   Transmembrane   Transmembrane helix  

Feature

chain  UPF0389 protein CG9231

Uniprot

A0A0L7KWY3   A0A194RNU9   A0A194PDI5   A0A3S2LHP6   A0A2H1WUQ7   A0A1E1WEG4   + More
S4P9R1   A0A212EJS7   A0A1J1HVG6   B0WAK7   A0A023EHP4   Q1HQM7   A0A1B0C0B5   A0A1L8E9D3   A0A1L8E9N8   A0A1L8E9R4   A0A023EHN7   A0A1W7R801   A0A1Q3FG97   A0A1Q3FGQ2   B4QQV2   A0A1B0GD62   B3NIF4   A0A1A9ZS69   X2JGV8   Q9VW12   A0A1W4URC7   B4IIM5   A0A0V0G9S3   A0A182JP53   A0A034WN90   A0A1B0CUG5   A0A1A9UQI2   A0A0K8V4J6   A0A0N7Z8E8   B4IUC1   A0A182SIR1   T1IG06   A0A182NK36   A0A2M4AU23   A0A0C9R0Q1   B3M700   A0A182PCT5   A0A182RDM4   T1DR25   W5JSC6   A0A182QDN9   A0A023FBJ9   A0A182YKT1   A0A1I8MM20   A0A182MVE3   A0A182FH59   A0A1C7CZ60   A0A182I2L0   A0A182WX15   A0A182VEZ1   Q7QIZ6   A0A182TDG0   A0A2M3ZIX0   A0A2M3ZB33   A0A2M4C221   A0A2M3ZCS0   A0A2M3ZIW7   A0A182WLK6   Q29DG0   D6WCW9   A0A1L8DUT7   B4H998   A0A1L8DUS0   A0A3B0J9I4   A0A1L8DUT2   A0A0A1WQK9   A0A182J8P1   A0A084WEM3   B4LCL9   V5I942   B4KZC5   A0A0M4EQX9   A0A1B6GAP2   A0A336JY21   A0A336LHZ6   A0A0P5DM24   A0A0P4WFB8   A0A1L8DUS6   K7J0G2   B4MXL7   A0A232F410   A0A0P6FED8   A0A0P4W9V1   A0A0A9X4I1   B4J1C2   A0A1L8DUR3   A0A0N8CBD7   E9GIP3   A0A0P6GUI1   A0A0P5YUW8   A0A0P6BUQ8   A0A1Y1L502   E9GIP2  

Pubmed

26227816    26354079    23622113    22118469    24945155    17204158    + More
17510324    17994087    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    12537569    17893096    25348373    27129103    17550304    20920257    23761445    25474469    25244985    25315136    20966253    12364791    14747013    17210077    15632085    18362917    19820115    25830018    24438588    20075255    28648823    25401762    26823975    21292972    28004739   

EMBL

JTDY01004796    KOB67747.1    KQ459896    KPJ19513.1    KQ459606    KPI91312.1    + More
RSAL01000007    RVE54050.1    ODYU01011211    SOQ56809.1    GDQN01005737    JAT85317.1    GAIX01003639    JAA88921.1    AGBW02014409    OWR41721.1    CVRI01000020    CRK91348.1    DS231873    EDS41561.1    GAPW01005197    JAC08401.1    DQ440417    CH477239    ABF18450.1    EAT46495.1    JXJN01023510    GFDG01003495    JAV15304.1    GFDG01003494    JAV15305.1    GFDG01003496    JAV15303.1    GAPW01005198    JAC08400.1    GEHC01000371    JAV47274.1    GFDL01008469    JAV26576.1    GFDL01008330    JAV26715.1    CM000363    CM002912    EDX11090.1    KMZ00565.1    CCAG010002320    CH954178    EDV52379.1    AE014296    AHN58145.1    AY094812    CH480844    EDW49796.1    GECL01001329    JAP04795.1    GAKP01001901    JAC57051.1    AJWK01029162    GDHF01018500    GDHF01017302    JAI33814.1    JAI35012.1    GDKW01003547    JAI53048.1    CM000159    CH891846    EDW95311.1    EDW99984.1    ACPB03011086    GGFK01010943    MBW44264.1    GBYB01006497    JAG76264.1    CH902618    EDV40865.1    GAMD01000840    JAB00751.1    ADMH02000310    ETN67021.1    AXCN02000433    GBBI01000414    JAC18298.1    AXCM01004731    APCN01000169    AAAB01008807    EAA04250.3    EDO64694.1    GGFM01007730    MBW28481.1    GGFM01004929    MBW25680.1    GGFJ01010173    MBW59314.1    GGFM01005499    MBW26250.1    GGFM01007702    MBW28453.1    CH379070    KQ971311    EEZ98829.1    GFDF01003898    JAV10186.1    CH479227    EDW35322.1    GFDF01003897    JAV10187.1    OUUW01000002    SPP76602.1    GFDF01003905    JAV10179.1    GBXI01013361    JAD00931.1    ATLV01023228    KE525341    KFB48667.1    CH940647    EDW69882.1    GALX01003590    JAB64876.1    CH933809    EDW18951.1    CP012525    ALC44767.1    GECZ01010268    JAS59501.1    UFQS01000007    UFQT01000007    SSW97121.1    SSX17507.1    SSW97120.1    SSX17506.1    GDIP01154386    LRGB01000568    JAJ69016.1    KZS18150.1    GDRN01061424    JAI65210.1    GFDF01003894    JAV10190.1    CH963876    EDW76786.1    NNAY01001049    OXU25342.1    GDIQ01192122    GDIQ01048887    JAN45850.1    KZS18148.1    GDRN01061425    JAI65209.1    GBHO01029910    GBHO01029909    GBHO01029907    GBHO01029906    GBRD01015554    GBRD01015553    GDHC01013733    GDHC01000020    JAG13694.1    JAG13695.1    JAG13697.1    JAG13698.1    JAG50272.1    JAQ04896.1    JAQ18609.1    CH916366    EDV97991.1    GFDF01003900    JAV10184.1    GDIQ01096363    JAL55363.1    GL732546    EFX80691.1    GDIQ01029143    JAN65594.1    GDIP01053076    JAM50639.1    GDIP01009550    JAM94165.1    GEZM01064505    JAV68753.1    EFX80690.1   

Proteomes

UP000037510    UP000053240    UP000053268    UP000283053    UP000007151    UP000183832    + More
UP000002320    UP000008820    UP000092460    UP000000304    UP000092444    UP000008711    UP000092445    UP000000803    UP000192221    UP000001292    UP000075881    UP000092461    UP000078200    UP000002282    UP000075901    UP000015103    UP000075884    UP000007801    UP000075885    UP000075900    UP000000673    UP000075886    UP000076408    UP000095301    UP000075883    UP000069272    UP000075882    UP000075840    UP000076407    UP000075903    UP000007062    UP000075902    UP000075920    UP000001819    UP000007266    UP000008744    UP000268350    UP000075880    UP000030765    UP000008792    UP000009192    UP000092553    UP000076858    UP000002358    UP000007798    UP000215335    UP000001070    UP000000305   

PRIDE

X2JGV8    Q9VW12   

Pfam

PF06388   DUF1075        + More
PF00089   Trypsin
PF00058   Ldl_recept_b

Interpro

IPR009432   DUF1075        + More
IPR011042   6-blade_b-propeller_TolB-like       
IPR000033   LDLR_classB_rpt       
IPR009003   Peptidase_S1_PA       
IPR001254   Trypsin_dom       

SUPFAM

SSF50494   SSF50494       

Gene 3D

2.120.10.30    

ProteinModelPortal

A0A0L7KWY3   A0A194RNU9   A0A194PDI5   A0A3S2LHP6   A0A2H1WUQ7   A0A1E1WEG4   + More
S4P9R1   A0A212EJS7   A0A1J1HVG6   B0WAK7   A0A023EHP4   Q1HQM7   A0A1B0C0B5   A0A1L8E9D3   A0A1L8E9N8   A0A1L8E9R4   A0A023EHN7   A0A1W7R801   A0A1Q3FG97   A0A1Q3FGQ2   B4QQV2   A0A1B0GD62   B3NIF4   A0A1A9ZS69   X2JGV8   Q9VW12   A0A1W4URC7   B4IIM5   A0A0V0G9S3   A0A182JP53   A0A034WN90   A0A1B0CUG5   A0A1A9UQI2   A0A0K8V4J6   A0A0N7Z8E8   B4IUC1   A0A182SIR1   T1IG06   A0A182NK36   A0A2M4AU23   A0A0C9R0Q1   B3M700   A0A182PCT5   A0A182RDM4   T1DR25   W5JSC6   A0A182QDN9   A0A023FBJ9   A0A182YKT1   A0A1I8MM20   A0A182MVE3   A0A182FH59   A0A1C7CZ60   A0A182I2L0   A0A182WX15   A0A182VEZ1   Q7QIZ6   A0A182TDG0   A0A2M3ZIX0   A0A2M3ZB33   A0A2M4C221   A0A2M3ZCS0   A0A2M3ZIW7   A0A182WLK6   Q29DG0   D6WCW9   A0A1L8DUT7   B4H998   A0A1L8DUS0   A0A3B0J9I4   A0A1L8DUT2   A0A0A1WQK9   A0A182J8P1   A0A084WEM3   B4LCL9   V5I942   B4KZC5   A0A0M4EQX9   A0A1B6GAP2   A0A336JY21   A0A336LHZ6   A0A0P5DM24   A0A0P4WFB8   A0A1L8DUS6   K7J0G2   B4MXL7   A0A232F410   A0A0P6FED8   A0A0P4W9V1   A0A0A9X4I1   B4J1C2   A0A1L8DUR3   A0A0N8CBD7   E9GIP3   A0A0P6GUI1   A0A0P5YUW8   A0A0P6BUQ8   A0A1Y1L502   E9GIP2  

KEGG

101739586    no KO assigned | (RefSeq) UPF0389 protein CG9231

GO

GO:0016021   GO:0004252  

PANTHER

PTHR13674  

Subcellular location

Membrane  

Length:

116

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

15.02737

Exp number, first 60 AAs:

0.0026

Total prob of N-in:

0.50164

outside

1  -  116

 

 

Pi

1.471663

Theta

6.954737

Tajima's D

-2.279167

CLR

10.289564

CSRT

0.00224988750562472

Interpretation

Uncertain