Gene

KWMTBOMO05057  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012559

Annotation

hypothetical_protein_RR46_14808_[Papilio_xuthus]

Location

Bomo_Chr9(-):6697233-6699552      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.115 Nuclear   Reliability : 1.584 PlasmaMembrane   Reliability : 1.157

CDS

ATGATGATGGTAAATATACTGCAGCAAATATCATACCTCAAGCTTTGGGCGGAAATAAAGAAAAATACAGATTGTGAAGATGATGACAAACTGATGAAAACAGTAGGACACATAGTTAAAAAAAAAACCAAAGAACTAAAAAAAGATTTCTTGGAATATAAAATATTACCCAAAATCAACAATGATATTAGTAAAGAAGGTCCTTTGATTAAATGCATAGAATTCCATCCAAAAATGAGTGTATCATTAATAGCTGGACAATCTGGTGTTGTTTCTTTATATTCAATTGGAGGTGACAAAAATGAAAGACTTCACAGTTTTAATCTAAAAAAGTGGCAAATAACTGCTGCACATTTTACACCAGATGGAAAAAGTGCTTTTATAGCCTCTAAAAGTAACCATTCTTACTGTATTTATGATTTAGTGAAGGCTGAAGCTAAACTTGTGCAGTTGCCACAAATCTCAAAGAGGCCACATATTTTTCAATTGTCACCAAATGGAAAATACTTAGCAACATCAGATTGTTTTGATGAAGTATACTTGATAGATACAGCATCTCAAGAACTAATAAGGGTGTTAAAAAATAGCACCAATATAAAATCAGCAGCTTTTAACAGTAACAGCAGTGAATTATATTGCTTTGGTGACCAAGGAATAGTTACAGTTTGGAGTTTATGTACATTTAAATCTCTGAAAAAATTCTATGACAATGGATGTGTAACTGCATCATGCATAACCACTAGTGCATGTGGAAGATTGATTGCTACAGGAAGCGGAGAAGGAATAGTGAACATTTATAAAACATCTGACCTAATGACAAATGAACCTATCCCTTTGAAGACAGTATCTAATATAACAACAAAAATTACATCATTAAAATTTAATTCAACCACAGAGATACTAGCTGCATGTTCTGCCTACTATCCTAATGCTGTAAAATTAATACATATTCCCTCATATCATGTTTACCAAAATTTTCCCAAACAGTCCTTCAATTATAATCATATTCAAGTAGTAAACTTTTCTCCAAACAGTGGCTATATGGCATTTTCAAACAACAGAGGATCTGCATTTTTACATCGTTTGAAATATTATAAAAACTATTAA

Protein

MMMVNILQQISYLKLWAEIKKNTDCEDDDKLMKTVGHIVKKKTKELKKDFLEYKILPKINNDISKEGPLIKCIEFHPKMSVSLIAGQSGVVSLYSIGGDKNERLHSFNLKKWQITAAHFTPDGKSAFIASKSNHSYCIYDLVKAEAKLVQLPQISKRPHIFQLSPNGKYLATSDCFDEVYLIDTASQELIRVLKNSTNIKSAAFNSNSSELYCFGDQGIVTVWSLCTFKSLKKFYDNGCVTASCITTSACGRLIATGSGEGIVNIYKTSDLMTNEPIPLKTVSNITTKITSLKFNSTTEILAACSAYYPNAVKLIHIPSYHVYQNFPKQSFNYNHIQVVNFSPNSGYMAFSNNRGSAFLHRLKYYKNY

Uniprot

H9JSP8   A0A1E1WPL9   A0A2H1X1J5   A0A194PF25   A0A0N1I555   S4NUA0   + More
A0A212FAF3   A0A0L7KS23   A0A0K2THK7   A0A026W5K4   A0A2M4BM03   A0A087ZSA4   D6WBP4   A0A154PJ66   A0A1Y1LQ18   U4U3Z0   N6UGQ3   A0A2M4BIY2   A0A2M4BIW4   E2A6U6   A0A0C9RKM3   K7J6G4   A0A232F7X8   A0A151X7Y3   E2C5S9   A0A1B0DKR0   A0A2M4AK59   A0A2M3ZHL7   A0A182YMV1   A0A195FUD2   A0A224XBD8   A0A0M9AAC6   T1EA49   A0A2M4CS79   A0A1Q3F016   A0A170XYG7   A0A2M4AJ13   B0W4Q8   A0A0A9Y4N2   A0A146LCV0   A0A2M3Z6N7   A0A0L7RD76   A0A2M4CSP6   A0A151I3H6   A0A158NNG9   A0A023F7U6   A0A151ITZ6   B4KRT4   A0A182Q9J1   A0A182NAP0   A0A195C3M6   A0A1B0CP70   A0A0M4E9D8   A0A182PD37   A0A069DUX3   A0A224ZB17   A0A224ZAK0   A0A0A1WVL3   A0A0P5PX06   A0A0P5RY44   A0A0P5IBD6   Q7PW92   A0A182G4G1   A0A2R7W9Y9   A0A182F3M2   A0A182RWF9   A0A0K8RD37   A0A182JZQ6   A0A0P4ZI00   A0A0N8CSN9   A0A0N7ZXD2   A0A0P5U0D3   A0A034W4R9   A0A0P6FHT2   A0A0P5GCZ1   A0A131Z1Z9   A0A0P5BLN1   E9IPF9   Q171N8   A0A0P5K7F3   A0A0P5MQZ6   A0A182TD97   A0A0P6GEI4   A0A1B6DTA7   A0A0P4VP61   A0A3B0IZF7   A0A182VG83   B4GAB6   A0A1B6FJD2   A0A182KYN0   Q291T1   A0A0P5TF13   A0A182X875   A0A0P6GXI2   A0A2P6KMU2   A0A131XPN2   B4MFP9   A0A0P4YXC1   R4FLG7   A0A2C9GRI0  

Pubmed

19121390    26354079    23622113    22118469    26227816    24508170    + More
30249741    18362917    19820115    28004739    23537049    20798317    20075255    28648823    25244985    25401762    26823975    21347285    25474469    17994087    26334808    28797301    25830018    12364791    26483478    25348373    26830274    21282665    17510324    27129103    20966253    15632085    28049606   

EMBL

BABH01032139    GDQN01002273    JAT88781.1    ODYU01012679    SOQ59118.1    KQ459606    + More
KPI91304.1    KQ461133    KPJ08864.1    GAIX01013392    JAA79168.1    AGBW02009490    OWR50703.1    JTDY01006358    KOB66073.1    HACA01008018    CDW25379.1    KK107462    QOIP01000013    EZA50314.1    RLU15197.1    RLU15435.1    GGFJ01004921    MBW54062.1    KQ971313    EEZ97885.1    KQ434931    KZC11853.1    GEZM01054385    JAV73706.1    KB631992    ERL87772.1    APGK01026506    KB740635    ENN79821.1    GGFJ01003802    MBW52943.1    GGFJ01003803    MBW52944.1    GL437203    EFN70812.1    GBYB01013817    GBYB01013818    JAG83584.1    JAG83585.1    NNAY01000777    OXU26559.1    KQ982431    KYQ56434.1    GL452801    EFN76713.1    AJVK01016095    GGFK01007849    MBW41170.1    GGFM01007262    MBW28013.1    KQ981268    KYN43902.1    GFTR01006699    JAW09727.1    KQ435714    KOX79203.1    GAMD01000747    JAB00844.1    GGFL01004024    MBW68202.1    GFDL01014152    JAV20893.1    GEMB01003893    JAR99363.1    GGFK01007277    MBW40598.1    DS231838    EDS33903.1    GBHO01017023    GBRD01002852    JAG26581.1    JAG62969.1    GDHC01012466    JAQ06163.1    GGFM01003442    MBW24193.1    KQ414615    KOC68750.1    GGFL01004023    MBW68201.1    KQ976492    KYM83299.1    ADTU01002719    GBBI01001428    JAC17284.1    KQ981001    KYN10413.1    CH933808    EDW08354.1    AXCN02000672    KQ978344    KYM94783.1    AJWK01021489    CP012524    ALC41508.1    GBGD01001263    JAC87626.1    GFPF01012998    MAA24144.1    GFPF01012997    MAA24143.1    GBXI01011727    JAD02565.1    GDIQ01143038    JAL08688.1    GDIQ01095530    JAL56196.1    GDIQ01215848    JAK35877.1    AAAB01008984    EAA15119.2    JXUM01042141    KQ561313    KXJ79024.1    KK854516    PTY16504.1    GADI01004726    JAA69082.1    GDIP01225788    JAI97613.1    GDIP01102735    JAM00980.1    GDIP01203281    JAJ20121.1    GDIP01136941    JAL66773.1    GAKP01010204    JAC48748.1    GDIQ01057105    JAN37632.1    GDIQ01242789    JAK08936.1    GEDV01003260    JAP85297.1    GDIP01182838    JAJ40564.1    GL764503    EFZ17568.1    CH477449    EAT40716.1    GDIQ01214151    JAK37574.1    GDIQ01153271    JAK98454.1    GDIQ01044767    JAN49970.1    GEDC01008397    JAS28901.1    GDKW01002463    JAI54132.1    OUUW01000001    SPP73437.1    CH479181    EDW31868.1    GECZ01019460    JAS50309.1    CM000071    EAL25031.1    GDIP01130896    JAL72818.1    GDIQ01039862    JAN54875.1    MWRG01008493    PRD27631.1    GEFH01000511    JAP68070.1    CH940667    EDW57220.1    GDIP01225787    JAI97614.1    ACPB03009097    GAHY01002119    JAA75391.1    APCN01005843   

Proteomes

UP000005204    UP000053268    UP000053240    UP000007151    UP000037510    UP000053097    + More
UP000279307    UP000005203    UP000007266    UP000076502    UP000030742    UP000019118    UP000000311    UP000002358    UP000215335    UP000075809    UP000008237    UP000092462    UP000076408    UP000078541    UP000053105    UP000002320    UP000053825    UP000078540    UP000005205    UP000078492    UP000009192    UP000075886    UP000075884    UP000078542    UP000092461    UP000092553    UP000075885    UP000007062    UP000069940    UP000249989    UP000069272    UP000075900    UP000075881    UP000008820    UP000075902    UP000268350    UP000075903    UP000008744    UP000075882    UP000001819    UP000076407    UP000008792    UP000015103    UP000075840   

PRIDE

H9JSP8   

Pfam

PF00400   WD40

Interpro

IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR001680   WD40_repeat       
IPR036322   WD40_repeat_dom_sf       
IPR017986   WD40_repeat_dom       

SUPFAM

SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9JSP8   A0A1E1WPL9   A0A2H1X1J5   A0A194PF25   A0A0N1I555   S4NUA0   + More
A0A212FAF3   A0A0L7KS23   A0A0K2THK7   A0A026W5K4   A0A2M4BM03   A0A087ZSA4   D6WBP4   A0A154PJ66   A0A1Y1LQ18   U4U3Z0   N6UGQ3   A0A2M4BIY2   A0A2M4BIW4   E2A6U6   A0A0C9RKM3   K7J6G4   A0A232F7X8   A0A151X7Y3   E2C5S9   A0A1B0DKR0   A0A2M4AK59   A0A2M3ZHL7   A0A182YMV1   A0A195FUD2   A0A224XBD8   A0A0M9AAC6   T1EA49   A0A2M4CS79   A0A1Q3F016   A0A170XYG7   A0A2M4AJ13   B0W4Q8   A0A0A9Y4N2   A0A146LCV0   A0A2M3Z6N7   A0A0L7RD76   A0A2M4CSP6   A0A151I3H6   A0A158NNG9   A0A023F7U6   A0A151ITZ6   B4KRT4   A0A182Q9J1   A0A182NAP0   A0A195C3M6   A0A1B0CP70   A0A0M4E9D8   A0A182PD37   A0A069DUX3   A0A224ZB17   A0A224ZAK0   A0A0A1WVL3   A0A0P5PX06   A0A0P5RY44   A0A0P5IBD6   Q7PW92   A0A182G4G1   A0A2R7W9Y9   A0A182F3M2   A0A182RWF9   A0A0K8RD37   A0A182JZQ6   A0A0P4ZI00   A0A0N8CSN9   A0A0N7ZXD2   A0A0P5U0D3   A0A034W4R9   A0A0P6FHT2   A0A0P5GCZ1   A0A131Z1Z9   A0A0P5BLN1   E9IPF9   Q171N8   A0A0P5K7F3   A0A0P5MQZ6   A0A182TD97   A0A0P6GEI4   A0A1B6DTA7   A0A0P4VP61   A0A3B0IZF7   A0A182VG83   B4GAB6   A0A1B6FJD2   A0A182KYN0   Q291T1   A0A0P5TF13   A0A182X875   A0A0P6GXI2   A0A2P6KMU2   A0A131XPN2   B4MFP9   A0A0P4YXC1   R4FLG7   A0A2C9GRI0  

PDB

5IC7     E-value=3.2608e-18,     Score=225

KEGG

101740273    K14553 U3 small nucleolar RNA-associated protein 18 | (RefSeq) U3 small nucleolar RNA-associated pro

PATHWAY

03008    Ribosome biogenesis in eukaryotes - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0032040   GO:0034388   GO:0048132   GO:0030532   GO:0042585   GO:0006364   GO:0007405   GO:0005730   GO:0005515   GO:0051082   GO:0031072   GO:0005524   GO:0009408   GO:0051287   GO:0016616   GO:0046168   GO:0016491   GO:0003824  

Length:

368

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0797600000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02614

outside

1  -  368

 

 

Pi

269.236297

Theta

215.966101

Tajima's D

0.887882

CLR

1.136266

CSRT

0.626818659067047

Interpretation

Uncertain