Gene

KWMTBOMO05054

Annotation

Methionyl-tRNA_formyltransferase?_mitochondrial_[Papilio_xuthus]

Location

Bomo_Chr9(+):6670653-6673022      View in EpiBrowser

Full name

Methionyl-tRNA formyltransferase, mitochondrial      

Location in the cell

Mitochondrial   Reliability : 1.783

CDS

ATGGGATTAATTGTAGCCTTTGGCCATTTGATAAAAATAGATCTTCTCAAGAAATTTCCTTTAGGTATGGTAAATGTCCATCCAAGCTTATTGCCGAGGTGGCGTGGTGCAGCTCCAATAATTTATACATTACTGCATGGAGATGAAATTACTGGAGTTACTCTTATGAAAATAAAAGCGGATATTTTTGATGTGGGAGAAATAATAAGTCAAAGAAAAGTACCCGTATCTAAAAATATAAAACTACCAGAACTCACCAAACAATTATCGGATATTGGTGCTGAAATGCTTGTAGAATGCATTAGTACATTACCACAGAGTATTGAAAATGCAAAACCACAAAGTGAAGAGGGTGTTACATATGCAAAGAAAATCAACAAGAGTATAAGTGAAGTGAATTGGGCACAAATGACTTCTAGAGATATTTATAACTTGTATAGAGCAATTTATGGATTGTATGCTCTATCAACAAAGTATAAAGATAAACATTTGAAACTATTCAATGCTTTTTTGAGTGATGAAGACACAGAAGAAAATTTGTATAGCCCAGTAGGGAAAAAGGAAATATCTGCTTTAGACTTCTACAATGGTTATATAAAAAATTTGGCTGTCGAAAAACGGGCAAAAGTTATCGTTGGTACCTGA

Protein

MGLIVAFGHLIKIDLLKKFPLGMVNVHPSLLPRWRGAAPIIYTLLHGDEITGVTLMKIKADIFDVGEIISQRKVPVSKNIKLPELTKQLSDIGAEMLVECISTLPQSIENAKPQSEEGVTYAKKINKSISEVNWAQMTSRDIYNLYRAIYGLYALSTKYKDKHLKLFNAFLSDEDTEENLYSPVGKKEISALDFYNGYIKNLAVEKRAKVIVGT

Catalytic Activity

(6S)-10-formyltetrahydrofolate + L-methionyl-tRNA(fMet) = (6S)-5,6,7,8-tetrahydrofolate + H(+) + N-formyl-L-methionyl-tRNA(fMet)

Similarity

Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
Belongs to the G-protein coupled receptor 1 family.
Belongs to the Fmt family.

Keywords

Complete proteome   Direct protein sequencing   Mitochondrion   Protein biosynthesis   Reference proteome   Transferase   Transit peptide  

Feature

chain  Methionyl-tRNA formyltransferase, mitochondrial

Uniprot

A0A194PD92   A0A212FLJ4   A0A3S2PKJ1   A0A2A4JBM5   S4PXV4   A0A0N1INN5   + More
A0A1I8M3J5   A0A026X1M0   A0A3L8DP41   A0A2H1W162   A0A154P2I2   W8AXL7   D3TQJ7   W8B9J2   A0A0L0CEM2   A0A1B6JD22   A0A1I8P0T2   A0A087ZV62   A0A1B6F599   A0A224XVT2   A0A2A3E999   E2BYY1   A0A1B6I7W5   A0A1Y1KCX3   A0A1B6K0L8   A0A1B6M3R9   A0A1B6JEY0   A0A1Y1KIK9   A0A023EZZ0   A0A3B0JK34   F4WWJ8   B3P7Q9   J9K100   A0A1B6KSR7   A0A1S3EPH2   A0A2H8TMZ4   A0A151X027   B4NH19   A0A0L7R1G7   B5DYL2   N6U5H6   A0A1B0D9Q0   A0A336MQT9   A0A158NB60   A0A151J865   A0A1A9ZJJ2   F1PSR5   B4GNR8   A0A1B0BMH8   A0A195BSS2   A0A2S2PNV3   G1TB07   A0A195D6L6   G1NBA8   A0A2J7Q5Y1   A0A1A9XTF9   A0A182GAD8   A0A2P8ZP52   A0A0A1WK21   A0A3Q7U7U6   A0A034WKL5   A0A3Q7Q2C6   A0A195EVU9   B4K4J1   A0A3P4R9A3   A0A2U3WKP3   A0A2Y9K8U1   A0A0M3QYP2   A0A336LAU6   O77480   A0A0P5R2Z2   A0A1D5NT29   A0A2Y9HCT2   A0A162S8F3   B3M082   A0A0K8WA76   A0A0K8S3Z9   U3K6A1   A0A093D4J8   M3X767   Q9V9Z0   B4PNC0   A0A0P5AYU3   A0A1U7U8W7   A0A2Y9DHK3   A0A093CDK9   A0A0P7VCA8   A0A0N8AKL0   A0A0P5ZW60   A0A1W4UI04   A0A093QUP9   F6QHA6   D6W8W2   B3DNM1   A0A0A9WJL9   A0A3Q7SN04   A0A3L8SKL1   F1S1X2   G3W862   W5Q8I8  

EC Number

2.1.2.9

Pubmed

26354079    22118469    23622113    25315136    24508170    30249741    + More
24495485    20353571    26108605    20798317    28004739    25474469    21719571    17994087    15632085    23537049    21347285    16341006    21993624    20838655    26483478    29403074    25830018    25348373    19390049    9614118    15592404    17975172    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    19892987    18362917    19820115    25401762    30282656    21709235    20809919   

EMBL

KQ459606    KPI91301.1    AGBW02007748    OWR54614.1    RSAL01000007    RVE54061.1    + More
NWSH01002106    PCG69166.1    GAIX01004383    JAA88177.1    KQ461133    KPJ08867.1    KK107039    EZA61911.1    QOIP01000006    RLU22002.1    ODYU01005592    SOQ46582.1    KQ434804    KZC06067.1    GAMC01012840    JAB93715.1    EZ423699    ADD19975.1    GAMC01012842    JAB93713.1    JRES01000501    KNC30701.1    GECU01012304    GECU01010576    JAS95402.1    JAS97130.1    GECZ01024401    JAS45368.1    GFTR01004365    JAW12061.1    KZ288336    PBC27852.1    GL451531    EFN79099.1    GECU01024678    GECU01008433    JAS83028.1    JAS99273.1    GEZM01086586    JAV59224.1    GECU01002711    JAT04996.1    GEBQ01009420    JAT30557.1    GECU01009916    JAS97790.1    GEZM01086584    JAV59226.1    GBBI01003902    JAC14810.1    OUUW01000005    SPP81153.1    GL888408    EGI61429.1    CH954182    EDV52967.1    ABLF02030897    GEBQ01025526    JAT14451.1    GFXV01003739    MBW15544.1    KQ982622    KYQ53707.1    CH964272    EDW84516.1    KQ414668    KOC64636.1    CM000070    EDY67629.1    APGK01048501    KB741112    KB632184    ENN73827.1    ERL89624.1    AJVK01013016    UFQS01001457    UFQT01001457    SSX11052.1    SSX30637.1    ADTU01010963    KQ979561    KYN21043.1    AAEX03016211    AAEX03016212    AAEX03016213    CH479186    EDW38801.1    JXJN01016919    JXJN01016920    KQ976417    KYM89718.1    GGMR01018448    MBY31067.1    AAGW02025121    AAGW02025122    KQ976760    KYN08506.1    NEVH01017543    PNF23982.1    JXUM01008871    KQ560270    KXJ83424.1    PYGN01000005    PSN58275.1    GBXI01014903    JAC99388.1    GAKP01004050    JAC54902.1    KQ981953    KYN32390.1    CH933806    EDW13943.1    CYRY02038627    VCX30631.1    CP012526    ALC47959.1    UFQS01001456    UFQT01001456    SSX11036.1    SSX30636.1    AB004316    GDIQ01126233    JAL25493.1    AADN05000047    LRGB01000084    KZS21091.1    CH902617    EDV42039.1    GDHF01004216    JAI48098.1    GBRD01017928    JAG47899.1    AGTO01020922    KL474160    KFV19999.1    AANG04001761    AE014297    AAF57138.2    CM000160    EDW99202.1    GDIP01192386    JAJ31016.1    KL239465    KFV11059.1    JARO02000057    KPP80109.1    GDIQ01266579    JAJ85145.1    GDIP01038934    JAM64781.1    KL425198    KFW90090.1    KQ971312    EEZ98405.2    BT033009    ACD99573.1    GBHO01034992    JAG08612.1    QUSF01000015    RLW03680.1    AEMK02000004    AEFK01007802    AMGL01101830    AMGL01101831    AMGL01101832   

Proteomes

UP000053268    UP000007151    UP000283053    UP000218220    UP000053240    UP000095301    + More
UP000053097    UP000279307    UP000076502    UP000037069    UP000095300    UP000005203    UP000242457    UP000008237    UP000268350    UP000007755    UP000008711    UP000007819    UP000081671    UP000075809    UP000007798    UP000053825    UP000001819    UP000019118    UP000030742    UP000092462    UP000005205    UP000078492    UP000092445    UP000002254    UP000008744    UP000092460    UP000078540    UP000001811    UP000078542    UP000001645    UP000235965    UP000092443    UP000069940    UP000249989    UP000245037    UP000286640    UP000286641    UP000078541    UP000009192    UP000245340    UP000248482    UP000092553    UP000009136    UP000000539    UP000248481    UP000076858    UP000007801    UP000016665    UP000011712    UP000000803    UP000002282    UP000189704    UP000248480    UP000034805    UP000192221    UP000002281    UP000007266    UP000276834    UP000008227    UP000007648    UP000002356   

PRIDE

O77480    Q9V9Z0    F6QHA6    B3DNM1    F1S1X2   

Pfam

PF00551   Formyl_trans_N        + More
PF02911   Formyl_trans_C
PF00001   7tm_1

Interpro

IPR011034   Formyl_transferase-like_C_sf        + More
IPR005794   Fmt       
IPR005793   Formyl_trans_C       
IPR041711   Met-tRNA-FMT_N       
IPR036477   Formyl_transf_N_sf       
IPR002376   Formyl_transf_N       
IPR037022   Formyl_trans_C_sf       
IPR000856   Opsin_RH3/RH4       
IPR001760   Opsin       
IPR017452   GPCR_Rhodpsn_7TM       
IPR027430   Retinal_BS       
IPR000276   GPCR_Rhodpsn       

SUPFAM

SSF50486   SSF50486        + More
SSF53328   SSF53328       

Gene 3D

3.10.25.10    

CDD

cd08646  FMT_core_Met-tRNA-FMT_N

ProteinModelPortal

A0A194PD92   A0A212FLJ4   A0A3S2PKJ1   A0A2A4JBM5   S4PXV4   A0A0N1INN5   + More
A0A1I8M3J5   A0A026X1M0   A0A3L8DP41   A0A2H1W162   A0A154P2I2   W8AXL7   D3TQJ7   W8B9J2   A0A0L0CEM2   A0A1B6JD22   A0A1I8P0T2   A0A087ZV62   A0A1B6F599   A0A224XVT2   A0A2A3E999   E2BYY1   A0A1B6I7W5   A0A1Y1KCX3   A0A1B6K0L8   A0A1B6M3R9   A0A1B6JEY0   A0A1Y1KIK9   A0A023EZZ0   A0A3B0JK34   F4WWJ8   B3P7Q9   J9K100   A0A1B6KSR7   A0A1S3EPH2   A0A2H8TMZ4   A0A151X027   B4NH19   A0A0L7R1G7   B5DYL2   N6U5H6   A0A1B0D9Q0   A0A336MQT9   A0A158NB60   A0A151J865   A0A1A9ZJJ2   F1PSR5   B4GNR8   A0A1B0BMH8   A0A195BSS2   A0A2S2PNV3   G1TB07   A0A195D6L6   G1NBA8   A0A2J7Q5Y1   A0A1A9XTF9   A0A182GAD8   A0A2P8ZP52   A0A0A1WK21   A0A3Q7U7U6   A0A034WKL5   A0A3Q7Q2C6   A0A195EVU9   B4K4J1   A0A3P4R9A3   A0A2U3WKP3   A0A2Y9K8U1   A0A0M3QYP2   A0A336LAU6   O77480   A0A0P5R2Z2   A0A1D5NT29   A0A2Y9HCT2   A0A162S8F3   B3M082   A0A0K8WA76   A0A0K8S3Z9   U3K6A1   A0A093D4J8   M3X767   Q9V9Z0   B4PNC0   A0A0P5AYU3   A0A1U7U8W7   A0A2Y9DHK3   A0A093CDK9   A0A0P7VCA8   A0A0N8AKL0   A0A0P5ZW60   A0A1W4UI04   A0A093QUP9   F6QHA6   D6W8W2   B3DNM1   A0A0A9WJL9   A0A3Q7SN04   A0A3L8SKL1   F1S1X2   G3W862   W5Q8I8  

PDB

3TQQ     E-value=8.27956e-22,     Score=253

KEGG

101740404    K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] | (RefSeq) methionyl-tRNA formyltransferase, mi

PATHWAY

00670    One carbon pool by folate - Bombyx mori (domestic silkworm)
00970    Aminoacyl-tRNA biosynthesis - Bombyx mori (domestic silkworm)

GO

GO:0004479   GO:0018298   GO:0004930   GO:0007602   GO:0009881   GO:0007601   GO:0016021   GO:0016742   GO:0009058   GO:0071951   GO:0005739   GO:0016740   GO:0005759   GO:0005230   GO:0006810   GO:0016020   GO:0003824  

Subcellular location

Membrane  
Mitochondrion  

Length:

214

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01287

Exp number, first 60 AAs:

0.00766

Total prob of N-in:

0.00876

outside

1  -  214

 

 

Pi

283.345518

Theta

218.055657

Tajima's D

1.019822

CLR

0

CSRT

0.667416629168542

Interpretation

Uncertain