SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05050
Pre Gene Modal
BGIBMGA012538
Annotation
PREDICTED:_multiple_epidermal_growth_factor-like_domains_protein_11_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 4.168
 

Sequence

CDS
ATGTATTTAAGGATATTTTCAGTATTGATTATAACAGGGACCGTGGCAGCGCAACTGAAAGGTCCTAATGTCTGCACTAGACAAGAACCGTATACGACGATAATACGAGTATCCAAACAACAACCTTATCAGGTGAAGGAAAAAGCATGGTGTTTCAGTATGCTGCCCAGGTGTACTAAATACAGTATTAAATTCCGGCAAGTGTTCAGAACTGAGACACTCACGAAATATAGACTAGTCGAAGAGTGTTGCGAGGGCTATGCGCCGGACGCTGACGGCGAACAGTGCGTGCCTGTGTGCGTGGAGTCGTGCGTGCACGGTAAATGTGTCGCGCCGAACACGTGTACGTGTGCTCATGGATATGGGGGCCCGTCGTGCGATATATCTTGTCCCAACGGTAAATGGGGTCGGAATTGTCAGAACGATTGCCGTTGTCTTAACGGTGGTACGTGTGAACCTTTGACCGGGGACTGCGCCTGCACGCCCGGGTGGAGAGGCGACGCCTGCGAGCGCGCCTGCTCACCTTCTACGTACGGACACAAATGTGACGAGATATGCCAATGCAAAAATAACGCGACCTGCGATCCATCTTCAGGAGCTTGTAACTGCAGACCAGGCTTCACTGGGCCTTTGTGA
Protein
MYLRIFSVLIITGTVAAQLKGPNVCTRQEPYTTIIRVSKQQPYQVKEKAWCFSMLPRCTKYSIKFRQVFRTETLTKYRLVEECCEGYAPDADGEQCVPVCVESCVHGKCVAPNTCTCAHGYGGPSCDISCPNGKWGRNCQNDCRCLNGGTCEPLTGDCACTPGWRGDACERACSPSTYGHKCDEICQCKNNATCDPSSGACNCRPGFTGPL

Summary

EMBL
NWSH01002106    PCG69162.1    ODYU01011930    SOQ57962.1    KQ461133    KPJ08871.1    + More
KQ459606    KPI91297.1    AGBW02008996    OWR51934.1    BABH01032147    KQ435710    KOX79911.1    LBMM01000766    KMQ97542.1    KY031072    ATU82823.1    GL437918    EFN69867.1    KQ982850    KYQ49947.1    KZ288271    PBC29765.1    NEVH01009067    PNF34084.1    PNF34085.1    KQ978231    KYM96084.1    KQ414785    KOC60966.1    KK107159    EZA56760.1    KQ981940    KYN32673.1    KQ976529    KYM81794.1    ADTU01027495    ADTU01027496    GALX01004527    JAB63939.1    KQ434980    KZC13106.1    GEZM01015534    GEZM01015533    JAV91568.1    KQ971312    EEZ99224.1    GFTR01008414    JAW08012.1    GFWV01008694    MAA33423.1    CAQQ02110824    CAQQ02110825    HACA01014448    CDW31809.1    LJIG01016411    KRT80683.1    GBBM01000034    JAC35384.1    GANP01014946    JAB69522.1    GFPF01009985    MAA21131.1    GEDC01002010    JAS35288.1    GFPF01009984    MAA21130.1    GL453255    EFN76269.1    GEDV01006015    JAP82542.1    GDIQ01145269    JAL06457.1    GDIQ01137919    JAL13807.1    GDIQ01142013    JAL09713.1    KK852865    KDR14758.1    GDIQ01225794    JAK25931.1    GDIQ01221635    JAK30090.1    GL732535    EFX84014.1    GDIQ01254469    JAJ97255.1    GDIQ01221636    JAK30089.1    GDIQ01016447    JAN78290.1    GDIQ01088473    JAN06264.1    GDIQ01048293    JAN46444.1    QOIP01000001    RLU27105.1    GDHC01013740    JAQ04889.1    GDHC01015723    JAQ02906.1    GECU01010975    JAS96731.1    GDIP01227611    GDIP01175722    JAJ47680.1    GDIP01131823    JAL71891.1    GDIP01054538    JAM49177.1    GDIP01053195    JAM50520.1    GECZ01032103    GECZ01027321    JAS37666.1    JAS42448.1    GDIP01065037    JAM38678.1    NNAY01001082    OXU25212.1    GECU01037048    GECU01012681    JAS70658.1    JAS95025.1    GDIP01122372    JAL81342.1    GDIP01063790    JAM39925.1    GDIP01142823    JAL60891.1    GDIP01233162    JAI90239.1    GDIP01099423    JAM04292.1    GDIP01179412    GDIP01083579    GDIP01043940    JAM59775.1    KK854272    PTY14047.1    GDIP01157572    JAJ65830.1    GAKP01019493    JAC39459.1    GDIP01149977    JAJ73425.1    GDHF01015788    GDHF01010491    GDHF01010224    JAI36526.1    JAI41823.1    JAI42090.1    GDIQ01118666    JAL33060.1    GDHF01024923    JAI27391.1    GDIQ01117170    JAL34556.1    UFQT01000589    SSX25525.1    GDIP01181315    JAJ42087.1    GBRD01015697    GBRD01015696    JAG50129.1    GDIP01181314    JAJ42088.1    CH963847    EDW72650.2    AJWK01004723    AJWK01004724    AJWK01004725    GAKP01019495    JAC39457.1    QCYY01001256    ROT79332.1    UFQT01000124    SSX20470.1    GBXI01016082    JAC98209.1    ACPB03022061    GAMC01017540    JAB89015.1    DS235021    EEB10571.1    JRES01000611    KNC29867.1    GAMC01017542    JAB89013.1    APGK01006312    KB736698    ENN83158.1    GL888334    EGI62518.1    KB632278    ERL91269.1    GFDF01007270    JAV06814.1    GFDF01007271    JAV06813.1    CH902618    KPU77630.1   
Pfam
PF12661   hEGF        + More
PF00053   Laminin_EGF
PF07546   EMI
PF00008   EGF
PF07974   EGF_2
Interpro
IPR002049   Laminin_EGF        + More
IPR011489   EMI_domain       
IPR013032   EGF-like_CS       
IPR000742   EGF-like_dom       
IPR006212   Furin_repeat       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR013111   EGF_extracell       
SUPFAM
SSF57184   SSF57184       
PDB
4K0V     E-value=7.18456e-13,     Score=175

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.976238
 
 
Length:
211
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.16204
Exp number, first 60 AAs:
0.16204
Total prob of N-in:
0.02928
outside
1  -  211
 
 

Population Genetic Test Statistics

Pi
172.107363
Theta
165.717836
Tajima's D
0.176838
CLR
0.558939
CSRT
0.422578871056447
Interpretation
Uncertain
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