Gene

KWMTBOMO05048  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012537

Annotation

mitochondrial_ribosomal_protein_L32_[Bombyx_mori]

Location

Bomo_Chr9(+):6539263-6541574      View in EpiBrowser

Full name

39S ribosomal protein L32, mitochondrial      

Location in the cell

Mitochondrial   Reliability : 2.374

CDS

ATGTTTCCAAGGTTCATACAAGTGGTCCAACATTTAAAAAATTTAGAAAGATCGATCCTGTTAAGCCTTTTCGGTCATCCTCCAAAAGAACTAGCGTTAGCGGTCTCTGTTAATCAGCAACCAAAGCCAACTCCTAAAGCCTTTTCCATTCATGACTTAATAGGAGATGGATTCTTACTTGCGGTACCAAAGTTTAGAAGAACAGTTGAAAAGAGATTGAATCGGAAATTTGGGTGGCCTGAATATGTTTGGAAGCCATTTGTACCGAAAACTAATTTAAAAACATGCCATGAGTGTGGTCACCACCACGAACAAGGCAGACTATGTGGTAACTGCTACAAAAAGATAGGTAAAGAGACGAAAGAGATTCAAGGTGAAATATTAAAAAAATTAGGCAGTGGACCCATTGAACAAGATGTTATTGTTTTATATGAAGGAGAAACTTTACCAGACCAGCAAAAGGAATTTTGGAAAGGTAAAAGAATTGTTGAAATGAAAAAAGAAAGGCCACAATGGTTCAGTAAAAACCTATTACAAAAATCTACCCAACAACCCTCAAAATCTACTGATGTCAAACCCACAGATTTGGCTTAA

Protein

MFPRFIQVVQHLKNLERSILLSLFGHPPKELALAVSVNQQPKPTPKAFSIHDLIGDGFLLAVPKFRRTVEKRLNRKFGWPEYVWKPFVPKTNLKTCHECGHHHEQGRLCGNCYKKIGKETKEIQGEILKKLGSGPIEQDVIVLYEGETLPDQQKEFWKGKRIVEMKKERPQWFSKNLLQKSTQQPSKSTDVKPTDLA

Similarity

Belongs to the bacterial ribosomal protein bL32 family.

Keywords

Complete proteome   Mitochondrion   Reference proteome   Ribonucleoprotein   Ribosomal protein   Transit peptide  

Feature

chain  39S ribosomal protein L32, mitochondrial

Uniprot

Q2F5P4   H9JSM6   A0A194PJN4   I4DKG0   A0A1E1WFX5   A0A2H1WY10   + More
A0A2A4JBD2   A0A0N1I6X4   A0A0L7L1Q0   A0A2H4WW91   A0A212F9C6   A0A3S2M8S2   B4LVZ9   A0A3B0JFI5   R4V3V4   Q29BC5   A0A1B6HU49   A0A1W4UI35   A0A1B0BMH0   A0A1B6H346   Q9V9Z1   A0A1B6LYK9   A0A1A9WRP8   B4PNB9   B4GNR9   A0A1A9XTF4   B3P7R0   A0A1I8NYS6   B4QSL0   A0A2J7QZT3   A0A1L8EH61   A0A067QWR1   B4I008   A0A1L8EH36   A0A3B0JG86   A0A1L8EH69   B4K4J2   A0A1B0F9Z2   A0A1I8M245   A0A0L0CEA6   A0A1A9VVE7   A0A034WGW0   A0A0M4ET00   B4NH18   B3M081   A0A1A9ZJI8   A0A0K8URH5   W8B551   A0A1W4W5C7   A0A023EJI7   A0A1J1HPK3   A0A1B6FZ43   A0A182GP68   A0A1L8EAS3   A0A0P4VTI7   A0A0P6IW59   A0A1B6CMP4   A0A069DQJ9   K7JBK6   A0A151XAF3   A0A232ET11   A0A0K8TSF4   A0A195DXM5   A0A0V0GB12   A0A182K103   A0A2R7VUG9   A0A026VWC6   A0A0K8TFV5   A0A0A9XE27   A0A182MQZ4   A0A182XXR5   A0A2S2P9B1   A0A154P267   A0A151ICG6   F4WZX2   A0A224XYA9   A0A1B6J6V3   A0A182P6V1   A0A182Q3V1   B4JI22   A0A2H8TIR3   Q7QEA1   A0A182UHV3   D6WAF4   A0A0L7QLW3   A0A182JEV5   A0A1B6M966   A0A182W475   A0A1S3D874   U5EY42   A0A182S4Z0   A0A195B7S4   A0A158NGP0   A0A1Y1MWZ2   A0A336L163   A0A195FFC4   C4WTE4   A0A1L8DRZ1   J9K7M9  

Pubmed

19121390    26354079    22651552    26227816    22118469    17994087    + More
15632085    10731132    12537572    12537569    17550304    24845553    25315136    26108605    25348373    24495485    24945155    26483478    27129103    26999592    26334808    20075255    28648823    26369729    24508170    30249741    26823975    25401762    25244985    21719571    12364791    14747013    17210077    18362917    19820115    21347285    28004739   

EMBL

DQ311379    ABD36323.1    BABH01032150    KQ459606    KPI91295.1    AK401778    + More
BAM18400.1    GDQN01005162    JAT85892.1    ODYU01011930    SOQ57960.1    NWSH01002106    PCG69159.1    KQ461133    KPJ08873.1    JTDY01003516    KOB69433.1    KY514090    AUD12121.1    AGBW02009609    OWR50331.1    RSAL01000007    RVE54068.1    CH940650    EDW66504.1    OUUW01000005    SPP81154.1    KC740669    AGM32493.1    CM000070    EAL27073.1    GECU01029503    JAS78203.1    JXJN01016919    GECZ01000673    JAS69096.1    AE014297    AY118962    GEBQ01011293    JAT28684.1    CM000160    EDW99201.1    CH479186    EDW38802.1    CH954182    EDV52968.1    CM000364    EDX15107.1    NEVH01009067    PNF34096.1    GFDG01000843    JAV17956.1    KK852865    KDR14769.1    CH480819    EDW53615.1    GFDG01000834    JAV17965.1    SPP81155.1    GFDG01000833    JAV17966.1    CH933806    EDW13944.1    CCAG010006238    JRES01000501    KNC30743.1    GAKP01004156    JAC54796.1    CP012526    ALC47960.1    CH964272    EDW84515.1    CH902617    EDV42038.1    GDHF01023035    JAI29279.1    GAMC01012843    GAMC01012841    JAB93712.1    GAPW01004463    JAC09135.1    CVRI01000015    CRK89973.1    GECZ01014315    GECZ01009903    JAS55454.1    JAS59866.1    JXUM01014886    KQ560415    KXJ82529.1    GFDG01002939    JAV15860.1    GDKW01003416    JAI53179.1    GDUN01000008    JAN95911.1    GEDC01022737    JAS14561.1    GBGD01003017    JAC85872.1    AAZX01016879    KQ982339    KYQ57342.1    NNAY01002346    OXU21498.1    GDAI01000535    JAI17068.1    KQ980107    KYN17628.1    GECL01001088    JAP05036.1    KK854093    PTY11134.1    KK107681    QOIP01000006    EZA48062.1    RLU21587.1    GBRD01001540    GDHC01008737    JAG64281.1    JAQ09892.1    GBHO01025365    JAG18239.1    AXCM01000900    GGMR01013420    MBY26039.1    KQ434803    KZC05957.1    KQ978053    KYM97780.1    GL888480    EGI60262.1    GFTR01002856    JAW13570.1    GECU01012815    JAS94891.1    AXCN02002441    CH916369    EDV93942.1    GFXV01002201    MBW14006.1    AAAB01008847    EAA06874.4    KQ971312    EEZ98625.1    KQ414915    KOC59496.1    GEBQ01007495    JAT32482.1    GANO01002205    JAB57666.1    KQ976574    KYM80297.1    ADTU01015162    GEZM01018559    JAV90172.1    UFQS01001455    UFQT01001455    SSX11013.1    SSX30634.1    KQ981625    KYN39061.1    AK340579    BAH71164.1    GFDF01004838    JAV09246.1    ABLF02027482   

Proteomes

UP000005204    UP000053268    UP000218220    UP000053240    UP000037510    UP000007151    + More
UP000283053    UP000008792    UP000268350    UP000001819    UP000192221    UP000092460    UP000000803    UP000091820    UP000002282    UP000008744    UP000092443    UP000008711    UP000095300    UP000000304    UP000235965    UP000027135    UP000001292    UP000009192    UP000092444    UP000095301    UP000037069    UP000078200    UP000092553    UP000007798    UP000007801    UP000092445    UP000192223    UP000183832    UP000069940    UP000249989    UP000002358    UP000075809    UP000215335    UP000078492    UP000075881    UP000053097    UP000279307    UP000075883    UP000076408    UP000076502    UP000078542    UP000007755    UP000075885    UP000075886    UP000001070    UP000007062    UP000075902    UP000007266    UP000053825    UP000075880    UP000075920    UP000079169    UP000075900    UP000078540    UP000005205    UP000078541    UP000007819   

PRIDE

Q2F5P4    H9JSM6    Q9V9Z1   

Pfam

PF01783   Ribosomal_L32p        + More
PF13532   2OG-FeII_Oxy_2

Interpro

IPR011332   Ribosomal_zn-bd        + More
IPR002677   Ribosomal_L32p       
IPR032870   ALKBH7       
IPR037151   AlkB-like_sf       
IPR027450   AlkB-like       

SUPFAM

SSF57829   SSF57829       

Gene 3D

2.60.120.590    

ProteinModelPortal

Q2F5P4   H9JSM6   A0A194PJN4   I4DKG0   A0A1E1WFX5   A0A2H1WY10   + More
A0A2A4JBD2   A0A0N1I6X4   A0A0L7L1Q0   A0A2H4WW91   A0A212F9C6   A0A3S2M8S2   B4LVZ9   A0A3B0JFI5   R4V3V4   Q29BC5   A0A1B6HU49   A0A1W4UI35   A0A1B0BMH0   A0A1B6H346   Q9V9Z1   A0A1B6LYK9   A0A1A9WRP8   B4PNB9   B4GNR9   A0A1A9XTF4   B3P7R0   A0A1I8NYS6   B4QSL0   A0A2J7QZT3   A0A1L8EH61   A0A067QWR1   B4I008   A0A1L8EH36   A0A3B0JG86   A0A1L8EH69   B4K4J2   A0A1B0F9Z2   A0A1I8M245   A0A0L0CEA6   A0A1A9VVE7   A0A034WGW0   A0A0M4ET00   B4NH18   B3M081   A0A1A9ZJI8   A0A0K8URH5   W8B551   A0A1W4W5C7   A0A023EJI7   A0A1J1HPK3   A0A1B6FZ43   A0A182GP68   A0A1L8EAS3   A0A0P4VTI7   A0A0P6IW59   A0A1B6CMP4   A0A069DQJ9   K7JBK6   A0A151XAF3   A0A232ET11   A0A0K8TSF4   A0A195DXM5   A0A0V0GB12   A0A182K103   A0A2R7VUG9   A0A026VWC6   A0A0K8TFV5   A0A0A9XE27   A0A182MQZ4   A0A182XXR5   A0A2S2P9B1   A0A154P267   A0A151ICG6   F4WZX2   A0A224XYA9   A0A1B6J6V3   A0A182P6V1   A0A182Q3V1   B4JI22   A0A2H8TIR3   Q7QEA1   A0A182UHV3   D6WAF4   A0A0L7QLW3   A0A182JEV5   A0A1B6M966   A0A182W475   A0A1S3D874   U5EY42   A0A182S4Z0   A0A195B7S4   A0A158NGP0   A0A1Y1MWZ2   A0A336L163   A0A195FFC4   C4WTE4   A0A1L8DRZ1   J9K7M9  

PDB

6GB2     E-value=1.30119e-15,     Score=199

KEGG

778516    K02911 large subunit ribosomal protein L32 | (RefSeq) mRpL32; mitochondrial ribosomal protein L32

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0006412   GO:0005840   GO:0015934   GO:0003735   GO:0032543   GO:0005762   GO:0005759   GO:0006974   GO:1902445   GO:0006508   GO:0008233   GO:0007267   GO:0007275   GO:0005685   GO:0003677   GO:0005515   GO:0016742   GO:0003824  

PANTHER

PTHR21052  

Subcellular location

Mitochondrion  

Length:

197

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00605

Exp number, first 60 AAs:

0.00453

Total prob of N-in:

0.04599

outside

1  -  197

 

 

Pi

253.873767

Theta

178.990431

Tajima's D

1.286045

CLR

0

CSRT

0.739563021848908

Interpretation

Uncertain