Gene

KWMTBOMO05044  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012567

Annotation

coiled-coil_domain_containing_12-like_protein_[Bombyx_mori]

Location

Bomo_Chr9(-):6418960-6420682      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.214

CDS

ATGGACAGTGCAGAATCTGTCGGTAGCTTAGAAGAGCAAGCTCTCAAAAGAAAAGAAAGACTGAAGAATCTAAAAAGAAAACGAACAAACAGTGATAATACATCAAATAATACTACAAATGAAACAATGACACTGCCCAAACCAAAATTTAGAAGTTACAAGCCTCAAGATGAAGCATTACAAGAATCCAAACTTAATGATGCAGAACCAACAGTGATAGAAGAAGAAGTAAAAGATTTGTTGGAGGCTGGTAAAGAAAAGGTGGTTCTCCAGGATCTCGACATAACAAGTTTAGCACCGAGAAAACCAGACTGGGACCTCAAACGAGATGTGGCCAAAAAGCTAGAGAGATTAGAACGGAAGACACAGAGAGCCATAGCTGAATTGATTTGGGATAGATTGAAACATGGAAATGAAGATAATTTAAGTGCTATGATTACAATGACTGCTAACCGACCTACCATTACAGATGATGACTAA

Protein

MDSAESVGSLEEQALKRKERLKNLKRKRTNSDNTSNNTTNETMTLPKPKFRSYKPQDEALQESKLNDAEPTVIEEEVKDLLEAGKEKVVLQDLDITSLAPRKPDWDLKRDVAKKLERLERKTQRAIAELIWDRLKHGNEDNLSAMITMTANRPTITDDD

Uniprot

Q2F621   H9JSQ6   A0A2A4JIB9   S4PWX2   A0A1E1W961   A0A2H1WHW2   + More
A0A194QFI2   A0A0N1I560   A0A212EZ02   A0A0L7KVS9   A0A0L7QLV2   A0A069DND5   A0A2J7QNV7   A0A1Y1MRV0   A0A023F3M0   A0A1B6LUN7   A0A1B6CSQ9   A0A1B6K0R9   A0A1B6ESD2   T1ISS2   A0A210QU34   A0A023GER5   A0A195DY89   A0A0J7N6Q2   A0A2R7WGM7   A0A023EFR9   A0A0A9VWF0   A0A023EFJ6   A0A131ZA09   A0A2T7PRI6   Q16UE5   V4AFA5   A0A0B7ABG1   B7PUI3   A0A182RKU3   A0A182NN35   G3P1C0  

Pubmed

19121390    23622113    26354079    22118469    26227816    26334808    + More
28004739    25474469    28812685    24945155    25401762    26823975    26830274    17510324    23254933   

EMBL

DQ311251    ABD36196.1    BABH01032173    BABH01032174    BABH01032175    BABH01032176    + More
BABH01032177    NWSH01001295    PCG71807.1    GAIX01006043    JAA86517.1    GDQN01007565    JAT83489.1    ODYU01008439    SOQ52054.1    KQ459144    KPJ03705.1    KQ461133    KPJ08877.1    AGBW02011400    OWR46723.1    JTDY01005275    KOB67166.1    KQ414915    KOC59486.1    GBGD01003311    JAC85578.1    NEVH01012562    PNF30269.1    GEZM01029644    JAV86017.1    GBBI01003243    JAC15469.1    GEBQ01012573    JAT27404.1    GEDC01020806    JAS16492.1    GECU01002664    JAT05043.1    GECZ01028961    GECZ01004524    JAS40808.1    JAS65245.1    JH431446    NEDP02001898    OWF52229.1    GBBM01002857    JAC32561.1    KQ980107    KYN17672.1    LBMM01009127    KMQ88370.1    KK854636    PTY17515.1    GAPW01005406    JAC08192.1    GBHO01044093    GBHO01044090    GBHO01044088    GBHO01036057    GBHO01029881    GBRD01009598    GBRD01009597    GDHC01015161    GDHC01002949    JAF99510.1    JAF99513.1    JAF99515.1    JAG07547.1    JAG13723.1    JAG56226.1    JAQ03468.1    JAQ15680.1    GAPW01005405    JAC08193.1    GEDV01000907    JAP87650.1    PZQS01000002    PVD35987.1    CH477623    EAT38152.1    EAT38153.1    KB202163    ESO92036.1    HACG01030491    CEK77356.1    ABJB010204413    DS792634    EEC10255.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000053825    UP000235965    UP000242188    UP000078492    UP000036403    UP000245119    UP000008820    UP000030746    UP000001555    UP000075900    UP000075884    UP000007635   

PRIDE

Q2F621    H9JSQ6   

Pfam

PF08315   cwf18

Interpro

IPR013169   mRNA_splic_Cwf18       

ProteinModelPortal

Q2F621   H9JSQ6   A0A2A4JIB9   S4PWX2   A0A1E1W961   A0A2H1WHW2   + More
A0A194QFI2   A0A0N1I560   A0A212EZ02   A0A0L7KVS9   A0A0L7QLV2   A0A069DND5   A0A2J7QNV7   A0A1Y1MRV0   A0A023F3M0   A0A1B6LUN7   A0A1B6CSQ9   A0A1B6K0R9   A0A1B6ESD2   T1ISS2   A0A210QU34   A0A023GER5   A0A195DY89   A0A0J7N6Q2   A0A2R7WGM7   A0A023EFR9   A0A0A9VWF0   A0A023EFJ6   A0A131ZA09   A0A2T7PRI6   Q16UE5   V4AFA5   A0A0B7ABG1   B7PUI3   A0A182RKU3   A0A182NN35   G3P1C0  

KEGG

693094    K12871 coiled-coil domain-containing protein 12 | (RefSeq) coiled-coil domain containing 12-like pro

PATHWAY

03040    Spliceosome - Bombyx mori (domestic silkworm)

GO

PANTHER

PTHR31551  

Length:

159

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04851

outside

1  -  159

 

 

Pi

232.207371

Theta

201.637163

Tajima's D

0.557975

CLR

0

CSRT

0.533573321333933

Interpretation

Uncertain