Silkworm Genome Informatics Database

Gene

KWMTBOMO05041

Pre Gene Modal

BGIBMGA012536

Annotation

hypothetical_protein_KGM_07091_[Danaus_plexippus]

Location

Bomo_Chr9(+):6363947-6371113 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.141

CDS

ATGGTATCGACGAGGCAAATGAGTAGCGTTGGGGGTGGTAACGGAAGCAGTGATGGTGCAGGCCCATCACACGCGGAATCTGTGTCCGTGTCCCGGGTGACACGACATTCTAGCGCCTTGATGCCGGGAGGCTCATCGCCGCACTCTAGCACTGCTAAGTGCACCGTTGTAGTGCCTGCAAAGACTTATAATACCAATTTAATGGATTTGCCCATTGAAGTTATCGAGAAAATATTTTGTTATCTGGGATTTAAATCTGTTTCTCATCTTAGAATGGTCAACCGACAATTCAACACAATATGTAGTGGGATATTAAATTCAACATTTCAACGCTTACAAAATCAAATGTTGCATAGATTCCATTCAATCAAAGCTAAAATGCCTCGAAGAGAATCAGCCCGTAGAAGCCATCCATTGGCTTGCGAGTCTGACATTATTGAAACTTTGCATATGAGATTAAGTTTGTTACAAATGACTTTTGGTAAACATATAGAGAGGAAACATTGTTGCTTTTTTCCAGGAGAGATATTAGATGAAGTATACAGTATTTTGTCTTATCTTAAAATAACAACTAAACTGGCAAGGCCATACAAAGTAACCGATGAGCTCTTTGATTTGACAACAATGGCTATGGAGTACTTTAAAGAACATATAGAACCAAATTTACCAGAGATTACATATTTTGGAACAGACTTTTTTGACATCACCACAGCATTTTCACCTGGTGAAAGTAGCAAGTCATACATTTGTCTAGACTCACCACCTGCTGGTTTTGATTCTTCTACATCACAACAACCAAATAATTCAAATGATTGTCGAGCTTCATCACTGACCATGTACATGGAAGAGAGTTTGCCTCCATCACCACCCCCACCCCAAAGTAATATGGTACTTAGGAAACGAATACATCGCATTAAACAAGGAATGAAGAAATATAATGATCAACTCTCGGCTTTACGGAGTGATTTACGCAGCTGTAAGCGCAAAACAGCACTTCAACAAAAGCAAATCGCTGAACAGCAAAAACAGATAGCTGAACAGCAAAAACAAACATTAGAGTATGCCAACCGTCTTGATGACTATGATAAGAAAAATGAGGAAACCAGTCGTAAATTTCAAACTCTATTACAGGAATTGAATAAATGTAAAACAGAACTACAGTTTTGGCGATCTCGATCACCGGCTGTGCCTCCATTGTGTGCGGAGTGCGGGGCCTCATTGCGTCTTTCACCATCATCATTTGCGCAGTGGGCGGCCGGAAGCAGTGGTGAAGATGCGGCCGAAGTAGCCGTAGAGGCGGTGGCCGTGGCGACCGGTCCCGAAGTCGTAGTGGAACTCAAGGCGGAGTCGAAGTCGAAATCAGAGCCGAAAGTCGAGAAAAAGCCAGAACCAAAATCTGAGACCAAGGCGAAAGCGGATACGAAATTGGAGACCAAGACGAAGTCTGATAACAAACAGGAAACCAAAAATAAAGTAGAAACAAAAGCGGAATCTGGAGGCGAAGGCTGCGCGTCCACCCCGCCCAGCCGTCGCCGCGCCTCCGCCGACGCTTCTCCGCCCGACCGCAAGAAGCGCAGGCTCACCCGTCCGCGCAAGCTCTGA

Protein

MVSTRQMSSVGGGNGSSDGAGPSHAESVSVSRVTRHSSALMPGGSSPHSSTAKCTVVVPAKTYNTNLMDLPIEVIEKIFCYLGFKSVSHLRMVNRQFNTICSGILNSTFQRLQNQMLHRFHSIKAKMPRRESARRSHPLACESDIIETLHMRLSLLQMTFGKHIERKHCCFFPGEILDEVYSILSYLKITTKLARPYKVTDELFDLTTMAMEYFKEHIEPNLPEITYFGTDFFDITTAFSPGESSKSYICLDSPPAGFDSSTSQQPNNSNDCRASSLTMYMEESLPPSPPPPQSNMVLRKRIHRIKQGMKKYNDQLSALRSDLRSCKRKTALQQKQIAEQQKQIAEQQKQTLEYANRLDDYDKKNEETSRKFQTLLQELNKCKTELQFWRSRSPAVPPLCAECGASLRLSPSSFAQWAAGSSGEDAAEVAVEAVAVATGPEVVVELKAESKSKSEPKVEKKPEPKSETKAKADTKLETKTKSDNKQETKNKVETKAESGGEGCASTPPSRRRASADASPPDRKKRRLTRPRKL

Uniprot

A0A2H1W3B5 A0A2A4JBP5 A0A212EZ41 A0A0N0PB67 A0A194QE05 A0A0L7KR92 + More
A0A154P275 A0A2A3E5T4 A0A1B6KHQ1 D6W986 A0A1B6IYW3 A0A232F581 A0A0P4W460

Pubmed

22118469 26354079 26227816 18362917 19820115 28648823 + More

EMBL

ODYU01006055 SOQ47571.1 NWSH01002241 PCG68852.1 AGBW02011400 OWR46721.1 + More
KQ461133 KPJ08879.1 KQ459144 KPJ03707.1 JTDY01006883 KOB65620.1 KQ434803 KZC05967.1 KZ288357 PBC27097.1 GEBQ01029028 JAT10949.1 KQ971312 EEZ98462.1 GECU01015604 JAS92102.1 NNAY01000936 OXU25835.1 GDRN01090705 JAI60425.1

Proteomes

UP000218220 UP000007151 UP000053240 UP000053268 UP000037510 UP000076502 + More
UP000242457 UP000007266 UP000215335

Pfam

PF00646 F-box + More
PF12937 F-box-like

Interpro

IPR032675   LRR_dom_sf        + More
IPR039719   FBXO28
IPR036047   F-box-like_dom_sf
IPR001810   F-box_dom

SUPFAM

SSF81383 SSF81383

Gene 3D

3.80.10.10

ProteinModelPortal

A0A2H1W3B5 A0A2A4JBP5 A0A212EZ41 A0A0N0PB67 A0A194QE05 A0A0L7KR92 + More
A0A154P275 A0A2A3E5T4 A0A1B6KHQ1 D6W986 A0A1B6IYW3 A0A232F581 A0A0P4W460

KEGG

101740676 K10306 F-box protein 28 | (RefSeq) F-box only protein 28

GO

GO:0005515 GO:0006508 GO:0008233 GO:0007267 GO:0007275 GO:0005685 GO:0003677 GO:0016742 GO:0003824

PANTHER

PTHR13252

Length:

533

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00749999999999999

Exp number, first 60 AAs:

4e-05

Total prob of N-in:

0.00726

outside

1 - 533

Pi

42.958782

Theta

163.270969

Tajima's D

-1.788144

CLR

1660.46707

CSRT

0.0302984850757462

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics