SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05036  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012569
Annotation
PREDICTED:_dnaJ_(Hsp40)_homolog_10_isoform_X1_[Bombyx_mori]
Full name
DnaJ homolog subfamily C member 9       + More
J domain-containing protein CG6693      
Alternative Name
DnaJ protein SB73
Location in the cell
Nuclear   Reliability : 3.997
 

Sequence

CDS
ATGGGTCTCTTGGATTTATGTGAAAAGTATTTTAATTCATCAAATTTATATGAAGTATTACAAATACCCGAAACTGCTAGCGAAAAAGAAGTGAAAAAGGCCTACCACAAACTATCGCTAAAGGTACATCCTGATCGAGTTAGTGAAGATCAAAAACTAGAGGCAACAGAAAAGTTCAAAGTACTTGGAAGTATTCATGAAATACTTAGCGACAAAAACAAACGAGCAGTTTACGATGAAACAAAGAGTGTTGATGATGATGACTTTAATGTCTTAGTAGACAAAGACTGGACAGTCTACTGGAGGCATTTATTCAAAAAAATTACAGAAGAAGACATAAAAGCTTATGAAAAAGAATATACTGGTTCACAAGAAGAGAAGGATGATCTAAAACAAGCCTATCTAACTGGTAAAGGTGACATGGACTACATTACAGATCATGTTCAATTTGCTAGAACTGAACATGAACCGAGAATCAGGGAAATCCTCAATAAAATGATAAAAGATGGTGAAATTCCTGCATATAAAATATTTACACATGAACCAGCTAAAAAGAAACAAAAACGAATTGCAAAAGAAAACCGTGAGGCGAAAGAAGCTGAAGAATTGAAGCAGGAATTAGGAATGACATCAGGACCCAATAGTTTAGAGTTAATGATCAGACAGAAACAACAATCTAGAGGTCAACAGCTAGATTCGTTTATAGATAACTTGGCAACTAAGTATGGTGGTAGCAATAAACCTAAGGGCACCAAAAGGAAGGCTGCTTCGAAAACGGAGGCAACAACTAAAAATAAAAGAAGGAAATAA
Protein
MGLLDLCEKYFNSSNLYEVLQIPETASEKEVKKAYHKLSLKVHPDRVSEDQKLEATEKFKVLGSIHEILSDKNKRAVYDETKSVDDDDFNVLVDKDWTVYWRHLFKKITEEDIKAYEKEYTGSQEEKDDLKQAYLTGKGDMDYITDHVQFARTEHEPRIREILNKMIKDGEIPAYKIFTHEPAKKKQKRIAKENREAKEAEELKQELGMTSGPNSLELMIRQKQQSRGQQLDSFIDNLATKYGGSNKPKGTKRKAASKTEATTKNKRRK

Summary

Description
May play a role as co-chaperone of the Hsp70 family proteins HSPA1A, HSPA1B and HSPA8.
Subunit
Interacts (via J domain) with HSPA1A, HSPA1B and HSPA8.
Keywords
Cell membrane   Chaperone   Complete proteome   Cytoplasm   Membrane   Nucleus   Phosphoprotein   Reference proteome  
Feature
chain  DnaJ homolog subfamily C member 9
EMBL
BABH01032184    JN872885    AFC01224.1    FJ592083    ACT34044.1    NWSH01002050    + More
PCG69305.1    ODYU01010043    SOQ54868.1    AGBW02011400    OWR46715.1    KQ459144    KPJ03715.1    KQ461133    KPJ08886.1    JTDY01002544    KOB71208.1    PYGN01001670    PSN33465.1    DS235248    EEB13920.1    NEVH01015820    PNF26651.1    GL440813    EFN65377.1    KK107681    EZA48065.1    AK075979    AK077324    AK153033    AK162075    BC014686    BC023787    BC027012    GEBQ01030155    JAT09822.1    AC115418    AB002591    CH474061    BAF91584.1    EDL86220.1    GECU01008135    JAS99571.1    GECZ01026400    JAS43369.1    MH777965    AYN74446.1    GL888480    EGI60311.1    ADTU01015202    KK852598    KDR20554.1    CYRY02001002    VCW55425.1    KN121161    KFO36990.1    GAMT01008927    GAMS01009930    GAMR01001432    GAMQ01005451    GAMP01006531    JAB02934.1    JAB13206.1    JAB32500.1    JAB36400.1    JAB46224.1    LZPO01035006    OBS76091.1    GBYB01012481    JAG82248.1    ACTA01001394    ACTA01193381    JP008811    AER97408.1    GL192753    EFB26047.1    AAQR03018881    CM000160    EDW96894.1    AAZX01000337    AAZX01010388    AAZX01015821    AAZX01020595    KB030800    ELK09538.1    AEYP01073222    AEMK02000096    DQIR01245870    HDC01348.1    JH173684    GEBF01003985    EHB17474.1    JAN99647.1    GAMC01000616    JAC05940.1    AANG04000273    CH902617    EDV42984.2    AAKN02021265    CH471083    EAW54486.1    AF327347    AK074420    AK094162    BC136507    AQIA01071348    CM001284    EHH64759.1    JU333610    JU474870    JV046546    CM001261    AFE77365.1    AFH31674.1    AFI36617.1    EHH19092.1    NDHI03003469    PNJ40588.1    GEDC01009772    JAS27526.1    AE014297    AGB95855.1    AY069345    CH480815    EDW42642.1    AQIB01043318    AJFE02053936    AACZ04041159    GABC01006669    GABF01003674    GABD01000628    JAA04669.1    JAA18471.1    JAA32472.1    CM000364    EDX13399.1    GFFW01003018    JAV41770.1    GABE01007223    NBAG03000223    JAA37516.1    PNI75413.1    AAGW02037043    JSUE03043584    JSUE03043585    CABD030069967    GBGD01002553    JAC86336.1    AMGL01071490    CM000070    EAL29088.1    CH479185    EDW38392.1    NTJE010070602    MBV97967.1    CR760461    CAJ82408.1   
Pfam
PF00226   DnaJ
Interpro
IPR001623   DnaJ_domain        + More
IPR018253   DnaJ_domain_CS       
IPR036869   J_dom_sf       
SUPFAM
SSF46565   SSF46565       
Gene 3D
PDB
2DMX     E-value=5.65843e-09,     Score=143

Ontologies

Topology

Subcellular location
Nucleus   Predominantly nuclear. Translocates to the cytoplasm and membrane after heat shock.   With evidence from 2 publications.
Cytoplasm   Predominantly nuclear. Translocates to the cytoplasm and membrane after heat shock.   With evidence from 2 publications.
Cell membrane   Predominantly nuclear. Translocates to the cytoplasm and membrane after heat shock.   With evidence from 2 publications.
Length:
269
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.06070
outside
1  -  269
 
 

Population Genetic Test Statistics

Pi
154.404523
Theta
169.04493
Tajima's D
-0.85481
CLR
42.067591
CSRT
0.164141792910354
Interpretation
Uncertain
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