Gene

KWMTBOMO05032  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012571

Annotation

signal_recognition_particle_19_kDa_protein_[Bombyx_mori]

Location

Bomo_Chr9(-):6220081-6221756      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.239

CDS

ATGGCTAGTATGATAACATCTTGGAATCCCGAAAAGAAGCACAGTGATGTGGAAAGATGGATATGCATTTACCCTGCATATTTGAACAGCAAAAAGACTCTCGCAGAAGGACGCAGACTTCCTAAATCTGTTTGTGTCGAAAACCCTACACATCAAGAAATTAGAGATGTTCTTCTTGCCACTGGGTTACGAGTAGGGGTTGAAAACAAATTGTATTCAAGAGAATGCAGCAAGGAAATGTTGTACAGAGGCAGAATACGCGTTCAAATTAAGAATGATGATGGTGCCCCTGTAAATCCTGAATTTCCTACTAGAGAATCTGTAATGAAATATATTGGTGAATCCATTCCAAAGCTAAAGACAAGACAGAATCGACCTGTGGAACAACAACCTCAACCAACAAATCAGGCAATCAGTAAGACAAAAGGGAAAAAAGGAAGGCGATGA

Protein

MASMITSWNPEKKHSDVERWICIYPAYLNSKKTLAEGRRLPKSVCVENPTHQEIRDVLLATGLRVGVENKLYSRECSKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGESIPKLKTRQNRPVEQQPQPTNQAISKTKGKKGRR

Uniprot

Q1HQ41   A0A1E1WRD3   A0A194QFJ8   H9JSR0   A0A0N1PGW2   S4PYH7   + More
A0A212EYZ8   A0A2H1WR08   A0A2J7QF43   A0A0A9Z8G3   A0A0T6BG91   A0A1B6D4C1   A0A2P8XF57   A0A0N0BKM3   A0A2A3E7A7   V9IGH9   A0A088ATP6   V5IAW8   A0A2R7VWN8   A0A0L7L6S7   A0A310SHZ7   R4WDL8   D6W9A1   A0A1B6GK49   A0A158NGR7   A0A151XAC3   A0A195DXV4   A0A0L7QLH6   A0A026VX70   A0A1W4WEQ8   A0A151IFL0   A0A224XZ92   E9ILD6   J3JX07   K7IYD2   R4G882   A0A232F8L8   A0A0P4VSK9   A6YPS1   E2B3V1   A0A1B6M517   A0A1Y1MPL5   A0A131XD43   A0A1B0GLN9   A0A1Y1MHT7   A0A0K8W5Y6   A0A0K8TTI0   A0A224Z157   A0A131YW60   L7M309   A0A0L0CCD8   A0A1B0D2K8   A0A154P9T5   A0A0A1XFG0   N6TUS2   A0A034WJ33   A0A195FFC6   A0A023GF27   A0A023FFJ2   A0A087TGC9   T1P8V6   G3MLV9   A0A1L8ECA1   U5EUC3   A0A195B7P9   A0A336MX53   W8CE95   A0A1I8NWH0   A0A023FWK3   F4WZL4   A0A131Y8E8   E1ZV52   A0A1B6GYD5   A0A1L8DVA3   A0A1S3DEK1   A0A0K8RQL2   B4J367   A0A0J7KPV6   A0A0M4E9J5   B4HV51   B4KZW8   T1DJV8   A0A1W4UGS4   B4PK62   A0A1B6JY16   A0A1B6GPZ7   B4LFC2   A0A1Z5L733   B4QKC9   A0A293M4P5   Q17BN4   A0A1A9X2U7   B5M0L7   B3NFE9   B4MLE4   A0A023EHB4   A0A182GLI4   A0A182PIN3   A0A1A9V594   A0A1E1WWR6  

Pubmed

26354079    19121390    23622113    22118469    25401762    26823975    + More
29403074    26227816    23691247    18362917    19820115    21347285    24508170    30249741    21282665    22516182    20075255    28648823    27129103    18207082    20798317    28004739    28049606    26369729    28797301    26830274    25576852    26108605    25830018    23537049    25348373    25315136    22216098    24495485    21719571    17994087    24330624    17550304    28528879    22936249    17510324    19166301    24945155    26483478    28503490   

EMBL

DQ443211    ABF51300.1    GDQN01001506    JAT89548.1    KQ459144    KPJ03720.1    + More
BABH01032192    KQ461133    KPJ08892.1    GAIX01003268    JAA89292.1    AGBW02011400    OWR46710.1    ODYU01010043    SOQ54874.1    NEVH01015302    PNF27204.1    GBHO01002875    GBRD01000178    GDHC01014170    GDHC01010509    JAG40729.1    JAG65643.1    JAQ04459.1    JAQ08120.1    LJIG01000582    KRT86358.1    GEDC01025970    GEDC01016778    JAS11328.1    JAS20520.1    PYGN01002371    PSN30640.1    KQ435698    KOX80722.1    KZ288357    PBC27106.1    JR046506    AEY60208.1    GALX01000460    JAB68006.1    KK854101    PTY11311.1    JTDY01002608    KOB71105.1    KQ765373    OAD53960.1    AK417644    BAN20859.1    KQ971312    EEZ98192.1    GECZ01007009    JAS62760.1    ADTU01015173    KQ982339    KYQ57316.1    KQ980107    KYN17656.1    KQ414915    KOC59477.1    KK107681    QOIP01000006    EZA48091.1    RLU21551.1    KQ977793    KYM99664.1    GFTR01002486    JAW13940.1    GL764074    EFZ18605.1    BT127775    AEE62737.1    ACPB03010483    GAHY01001427    JAA76083.1    NNAY01000716    OXU26830.1    GDKW01000466    JAI56129.1    EF639082    ABR27967.1    GL445407    EFN89620.1    GEBQ01008958    JAT31019.1    GEZM01030911    GEZM01030910    GEZM01030909    GEZM01030908    GEZM01030907    GEZM01030906    GEZM01030905    GEZM01030904    GEZM01030903    GEZM01030902    GEZM01030901    GEZM01030898    GEZM01030896    GEZM01030895    GEZM01030894    GEZM01030893    GEZM01030890    GEZM01030889    GEZM01030888    GEZM01030887    GEZM01030886    GEZM01030885    GEZM01030884    GEZM01030883    GEZM01030882    GEZM01030881    GEZM01030880    GEZM01030879    GEZM01030878    GEZM01030877    GEZM01030876    GEZM01030875    JAV85177.1    GEFH01003692    JAP64889.1    AJWK01032579    AJWK01032580    GEZM01030899    GEZM01030897    GEZM01030892    GEZM01030891    JAV85221.1    GDHF01006044    JAI46270.1    GDAI01000363    JAI17240.1    GFPF01011759    MAA22905.1    GEDV01006396    JAP82161.1    GACK01006333    JAA58701.1    JRES01000611    KNC29896.1    AJVK01022918    KQ434851    KZC08612.1    GBXI01004153    JAD10139.1    APGK01019841    APGK01053910    KB741239    KB740134    KB632275    ENN72116.1    ENN81276.1    ERL91090.1    GAKP01004600    JAC54352.1    KQ981625    KYN39088.1    GBBM01002936    JAC32482.1    GBBK01004140    JAC20342.1    KK115093    KFM64168.1    KA644570    AFP59199.1    JO842860    AEO34477.1    GFDG01002543    JAV16256.1    GANO01002384    JAB57487.1    KQ976574    KYM80272.1    UFQS01000200    UFQS01003214    UFQT01000200    UFQT01003214    SSX01240.1    SSX34740.1    GAMC01000586    JAC05970.1    GBBL01002212    JAC25108.1    GL888480    EGI60289.1    GEFM01000297    JAP75499.1    GL434441    EFN74911.1    GECZ01002336    JAS67433.1    GFDF01003741    JAV10343.1    GADI01000431    JAA73377.1    CH916366    EDV96138.1    LBMM01004578    KMQ92269.1    CP012525    ALC43778.1    CH480817    EDW50822.1    CH933809    EDW17980.1    GALA01000031    JAA94821.1    CM000159    EDW93742.1    GECU01003634    JAT04073.1    GECZ01005257    JAS64512.1    CH940647    EDW69220.1    GFJQ02003855    JAW03115.1    CM000363    CM002912    EDX09552.1    KMY98067.1    GFWV01010332    MAA35061.1    CH477319    EAT43679.1    EU930203    ACH56831.1    CH954178    EDV50491.1    CH963847    EDW73402.1    GAPW01005318    JAC08280.1    JXUM01072247    KQ562710    KXJ75286.1    GFAC01007952    JAT91236.1   

Proteomes

UP000053268    UP000005204    UP000053240    UP000007151    UP000235965    UP000245037    + More
UP000053105    UP000242457    UP000005203    UP000037510    UP000007266    UP000005205    UP000075809    UP000078492    UP000053825    UP000053097    UP000279307    UP000192223    UP000078542    UP000002358    UP000015103    UP000215335    UP000008237    UP000092461    UP000037069    UP000092462    UP000076502    UP000019118    UP000030742    UP000078541    UP000054359    UP000095301    UP000078540    UP000095300    UP000007755    UP000000311    UP000079169    UP000001070    UP000036403    UP000092553    UP000001292    UP000009192    UP000192221    UP000002282    UP000008792    UP000000304    UP000008820    UP000091820    UP000008711    UP000007798    UP000069940    UP000249989    UP000075885    UP000078200   

PRIDE

Q1HQ41    H9JSR0   

Pfam

PF01922   SRP19        + More
PF00194   Carb_anhydrase

Interpro

IPR036521   SRP19-like_sf        + More
IPR002778   Signal_recog_particle_SRP19       
IPR023561   Carbonic_anhydrase_a-class       
IPR018338   Carbonic_anhydrase_a-class_CS       
IPR001148   CA_dom       
IPR036398   CA_dom_sf       

SUPFAM

SSF69695   SSF69695        + More
SSF51069   SSF51069       

Gene 3D

3.30.56.30     3.10.200.10    

ProteinModelPortal

Q1HQ41   A0A1E1WRD3   A0A194QFJ8   H9JSR0   A0A0N1PGW2   S4PYH7   + More
A0A212EYZ8   A0A2H1WR08   A0A2J7QF43   A0A0A9Z8G3   A0A0T6BG91   A0A1B6D4C1   A0A2P8XF57   A0A0N0BKM3   A0A2A3E7A7   V9IGH9   A0A088ATP6   V5IAW8   A0A2R7VWN8   A0A0L7L6S7   A0A310SHZ7   R4WDL8   D6W9A1   A0A1B6GK49   A0A158NGR7   A0A151XAC3   A0A195DXV4   A0A0L7QLH6   A0A026VX70   A0A1W4WEQ8   A0A151IFL0   A0A224XZ92   E9ILD6   J3JX07   K7IYD2   R4G882   A0A232F8L8   A0A0P4VSK9   A6YPS1   E2B3V1   A0A1B6M517   A0A1Y1MPL5   A0A131XD43   A0A1B0GLN9   A0A1Y1MHT7   A0A0K8W5Y6   A0A0K8TTI0   A0A224Z157   A0A131YW60   L7M309   A0A0L0CCD8   A0A1B0D2K8   A0A154P9T5   A0A0A1XFG0   N6TUS2   A0A034WJ33   A0A195FFC6   A0A023GF27   A0A023FFJ2   A0A087TGC9   T1P8V6   G3MLV9   A0A1L8ECA1   U5EUC3   A0A195B7P9   A0A336MX53   W8CE95   A0A1I8NWH0   A0A023FWK3   F4WZL4   A0A131Y8E8   E1ZV52   A0A1B6GYD5   A0A1L8DVA3   A0A1S3DEK1   A0A0K8RQL2   B4J367   A0A0J7KPV6   A0A0M4E9J5   B4HV51   B4KZW8   T1DJV8   A0A1W4UGS4   B4PK62   A0A1B6JY16   A0A1B6GPZ7   B4LFC2   A0A1Z5L733   B4QKC9   A0A293M4P5   Q17BN4   A0A1A9X2U7   B5M0L7   B3NFE9   B4MLE4   A0A023EHB4   A0A182GLI4   A0A182PIN3   A0A1A9V594   A0A1E1WWR6  

PDB

5M73     E-value=4.17871e-29,     Score=313

KEGG

732924    K03105 signal recognition particle subunit SRP19 | (RefSeq) signal recognition particle 19 kDa prote

PATHWAY

03060    Protein export - Bombyx mori (domestic silkworm)

GO

GO:0008312   GO:0006614   GO:0048500   GO:0006617   GO:0005786   GO:0008270   GO:0004089   GO:0016021   GO:0000387   GO:0000398   GO:0005685   GO:0003677   GO:0005515   GO:0016742   GO:0003824  

PANTHER

PTHR17453   PTHR18952  

Length:

148

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00028

Exp number, first 60 AAs:

0.00028

Total prob of N-in:

0.33863

outside

1  -  148

 

 

Pi

195.833499

Theta

162.94104

Tajima's D

0.651737

CLR

0.000459

CSRT

0.554522273886306

Interpretation

Uncertain