SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05018
Pre Gene Modal
BGIBMGA012525
Annotation
PREDICTED:_zinc_finger_SWIM_domain-containing_protein_8-like_[Bombyx_mori]
Location
Bomo_Chr9(+):5676448-5699317      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 2.945
 

Sequence

CDS
ATGGGAAAGGGGGACGACAAGCAGCCCCGGTGGACGTGGGATCGCCCCTGCTTGATTGGGAAGAAGGTGATCACTTCAGTTTCGAAGACTCTGAACGTTTCGAAGAAGATTCTCTTTGCAGCTGGAGTTCAGAACCTGAAAGCTTGTGTAATAACTGGCGTGGGTGGCGGCGACCAAACTTACAGAACTCATTTGGAGCTCGCTCTACAAAAAAGACCGTTCAAGAAAAGACACTTCCCAGACAGTGAAGATGACATTAGACTTTACTCTTGTTTGGCAAATGGATCAGCAGATGAATTCCAGAGAGGAGAGCATCTATTCAGAGATAGAGCTGTTAAAGATGTTTTACAAATTGGTTTTCATTTATCTGCCACAGTTGTACTTACTATGCCTCGTGCCCAATTTAATGTCGCAGTAACGTTTGACAGACAGAGAATTTCATCATGTAACTGTACTTGTTCATCTACAGCACACTGGTGTTCACATATTGTAGCTGTATGTCTGTACAGAATTCATTTGCCTACACAAGTATGTCTTCGTGCACCTGTATCTGAATCATTACAAAGGTTAAGAAGAGACCAACTGCAAAAATTTGCACAGTATCTTATATCGGAACTACCTAGACAAATACTTCCGACGGCACAGCGTATTCTGGATGAATTACTGTCTGCCCAACCAAATCAGATAAACACGACTTGCGGGGCGCCAGATCCGACCGCTGGAGCATCAGCCTACGAATACACATCCTGGTTCTTAGATGAAAAGACCTTGCATAACAATATCAATAAAATATTAGTGAAGTTTTGTGTTCCAGCTCCTATTGTTTTCAGTGATGTAAATTACCTAAGCACAAGCGCACCACCAGCGGCATCTGAATGGTCATCTCTCCTTAGACCTCTAAGAGGGAGGGAGCCAGAAGGAATGTGGAATTTACTCTCTATAGTTAGAGAAATGTTCAAGAGAAACGATAGAAATGCTATACCCCTGCTCGAGATAATAACGGAAGAAGTTATGGCTTGCGAACAGATCATTATATGGTGGTATACGACGAAGGCATCCTTAGTGGCTTGGGGTGGTGGAACAGGAGGTAAACATGGCGGCGGTTCAGGCAACTCATCAGCCCAGCACGCCTGTTCATCTCTCTGTGATGAGGTGGTTGTATTGTGGCGACTCGCTGCGTTGAACCCTGCGCTCGCGCCGCACGAACGGGACACACTGCACGAACAATTCGTTCAGTGGCATTCCAAAGTACTTGATAAGGTAGCGAAGAATCGTAACAACCACATAGGCACATCCTCTTCGTCTTCGTCGTCACATTCGCGGCACCCGAGATCGCATTCGCATCCCCCTTACATCAATGGGATCAGCGAGAACGAAGTATTTCCCGGCTTCACTCCGGCCATGGAGGCCTGTTTCCTCGAGTGGGATGATTACCCAATTCCCGGAGTGACCTACACGAAAGACTTGAATCCCTTGTATCATAGTCCGTTCACTATTTTCCGCCACGCCGATAAGCAAAGCGAAAACGTTCATCAGGTGAATTCATCAAAAGCAGTACTTAACAATGAAATGTCATTAAGCTATAGACTGACAAATCCCGATCCGTCTCATGTACACAGAAATTTAATGCACAAAATTAGTAGAATTAGTGTTGATTTGGCTGTGCCGGGAACATCAAGTCAGCCGTGTGGGTCCGGACAAGGACCCAGTGGTGGGCCCCGTGATGGCAGCGGTCACAGCGATGGCAATCACTCTAGTGTATCATCGGAAGGTTTCTGTGAGAACGAAGAGGAGATGCAGGCGAGCGGCGGCGACACAGATTCTCACTCGTCGAGCTCCCCGAGCGCCTCGTCCGACGACGCCACACGGCGCATCTCGCAGGACGACTCTGTGTCCGACGACGAGTGTCAGCTGTACTACTACGACTCGGCGGCCGCTAGACGCCTCGAACTTAACTCTGCCTCAGGCGGCGGCACTAGTTCGTCGTGGACGGCGTCTGGCTGGGAGTGCGGCTGGGAGGTGCAGTTCGCCCGCGCGGAGGGTCTGCAGGCGCACGGGCGGGCGCGGGAGGCGAGCGCGCTGGGGGCGGCGCTGGCGCGGGAGCTGCTGGCGCGGCCGCCCGTGCTGCACGCGCCGCACGACCCGCGCCGGCCCCGCAAGAAGCACGCCGTCTCGCCGCGCCTCTGCGCCGCCTCGCACCGCCTCTCCTGTCTCGCCTCCGCCACGCTCGCCAAGTGCGCATTCCTCTGCACGGTCCTGGCTGAGTTTAGTGAACATCACGAACTTGCATTCAGAGTGGGTTTGTTCGCATTAGAAATGGCGCGTCCGCCGGCGAGCACTAAAGCGCTTGAAGTCAAGTTAAATAATCAAGAGACCGAGTTGGTGGCTTTACTTAAGAAGCTACCCACTGGGGCGGAACAATTGACATTGGCCCGAGAAAAGGCGGAGCAACTACGCGATGGAGTTCTGAAGAACCGAGGTCCAGCTCTTTTGCCGATTGCCTTGGCGAGTTTCCTATTCGAAGTTCTTGTACTGTCTGCGACTGATAAAGAAAACAAACACCCTGCAAGGTTAACATCTGACGAAATGCTCGGATTCGAAGCAGCCGTGGCGGCGTTGGGACTGAAAGCGAATGTTTCTGAAGCAGAACACCCTCTATTATGCGAAGGCACGAGGCGGCAAAGAGGAGAATTAGCTCTAACATTGTTATCGTTTTACAAGGACGATCCTGTTAAGTTGGCTAGAATTATGAATAAGTTGTTGGACCGCGACATCCACCAGCTGACGAAGGGCCCGATGGTGAGCATGTACTACATGAACAACCCGCGGCTGGCGGCGTACCGCTCGGACGTGTCGGCCGTGCCGCTGTATCCGCCGCTGTACCCGCCGCACGCGCACGCTCACCAGCATCAGCATACGATCCCGCACCCGATTCCAATCCCGCCGCCGTGCATACCGCCGGTGCCAGTGCAGGTCCAGTGCCCACTGGTCAGCGACATGGAGCGTCTGTCGTTATCGGAGGGTGGGCCGTCCCCGCCGTCGCACCTGCACATGCACACGCACGCTCTACACGCGCCTCACGTCACGCACGTGTCGCACACTACACACGTGCCGCACACCACACACGGACAGCACAACACGCACGTGTCGCACGTGACTCATGTGCCCCACACGCCTCATTCGTCTCACGTGCCGCACACGACCCACGTGCTGCAAACAACGACCCACGTGCCCCACACGACTCACGTACCGCACACTACGCACCTGCCGCACACCTCGCACGTGCAGCACACGTCACACGTGCAGCACTCGTCGCATTCGCAGCACACTACGCACGGTCCGCACAGTTCGCACACGTCACACGGACAGCCACACATGTCGTCTCACGTAGCCATCACCAGATCGAAGGATTCAAGATATAAAGGAAAACGTCAATATCCGTCCGTGCCAAATCAACCCTCGGAGGCATCCGCCCATTTTATGTTCGAACTTGCGAAGTCTGTGTTGTTCAAAGCCGGCGGTTCGTCCAGTACCAGTCTATTCACGCAGACGTCATGCGCCAGAGAGCACCATGGACCACATCGGGGTTTACATATGGCGGCGTTTCAGTTAGGCCTATACGCACTAGGCCTACTAAACTGCGTGAGCGCAAATTGGCTCAGCCGGACGTATTCGTCTCATGTTAGTTGGATCACAGGGCAAGCAATGGACATCGGAGCTCCAGCTATTTTATTCTTAATCAATGCTTGGGAAGGACATTTGACGCCGCCAGAAGCGGCCAGTATTGCTGACAAGGCGTCGTCCGGTCGCGACGTGCACACGGTGCGAGCGGCCGCGGAGCTGGCGCTGTCGGTGCTGCCGCACGCGCACGCGCTCAACTTCAACGAGATACAGCGAGCCGTGTTGCAGTGCAAGGAGCAGAGTGACTCAATGCTCGAACGTGCCTGTCTCATAGTCGAGGAAGCGGCCAAAGGCGGCGGCGTGTACCCGGAGGTGCTGTACACCGTGGCGCGGTACTGGCACGAGCTGTACCTGCGCCAGCCGGGCGACGAGGCGGAGCACGACGAGCCGCAGTACCGGCCGGCGCCCCTCCCCGCGCCGCTGCCCGTGCCCTACCCCATCCCGTACCCGTTCACGTACCACGCCTACCCGCCTCCCATATACCAGCTGCAGTTTCTTGACCCACAGTATGGCGGCGCGGGAGGAGCGCAGTACGCATTGCCGCCGCCGTATTTCGTACGTGGAATAGCGCCACCGCCCATAGCTGTCAACGTCAGCGTGCATTCCACGCACGCGCCCCCGCTAGCGGCGCCGCTGCCCCCGCCGGCCCCCGCGCCCCCCGCGCCGCCCCCGCCCGCGCCCGCCAACAGCAGCTCGCCCAGCAACCAGGCACAGCTGCGCCGCCTGCTCTCCGCCTACAGGGTCGGCATGCTCGCCCTCGAAACTCAAGCGAGGCGCGTACACGACGATAGACCCCAGAACAAAAACCCGCCGTACGGCGAGCACGTGAAGTGGTTGCTGCGGATCTCGAAGCAGCTGGGCACGCAGTACCTGCACCAGTTCTGCGTGAGCGCCGTGAACTCGGTGGTGTCGCCCTTCGTGCTGTACGAGCTGTGCGTGGAGTCGGCGCACTGGCTGGCGCGCGGCGGCCCGCACCACATGGTCATGCAGCACCTGCGCGGCACGCTGGCGCCGCTCGTGCACAAGTGCCAGCAGATGTCTAAGTCGTGCAAGAAGGACCTGTGGACCCAGCTCAATGCGGCCCTGCAGACGAACGGCAAATGA
Protein
MGKGDDKQPRWTWDRPCLIGKKVITSVSKTLNVSKKILFAAGVQNLKACVITGVGGGDQTYRTHLELALQKRPFKKRHFPDSEDDIRLYSCLANGSADEFQRGEHLFRDRAVKDVLQIGFHLSATVVLTMPRAQFNVAVTFDRQRISSCNCTCSSTAHWCSHIVAVCLYRIHLPTQVCLRAPVSESLQRLRRDQLQKFAQYLISELPRQILPTAQRILDELLSAQPNQINTTCGAPDPTAGASAYEYTSWFLDEKTLHNNINKILVKFCVPAPIVFSDVNYLSTSAPPAASEWSSLLRPLRGREPEGMWNLLSIVREMFKRNDRNAIPLLEIITEEVMACEQIIIWWYTTKASLVAWGGGTGGKHGGGSGNSSAQHACSSLCDEVVVLWRLAALNPALAPHERDTLHEQFVQWHSKVLDKVAKNRNNHIGTSSSSSSSHSRHPRSHSHPPYINGISENEVFPGFTPAMEACFLEWDDYPIPGVTYTKDLNPLYHSPFTIFRHADKQSENVHQVNSSKAVLNNEMSLSYRLTNPDPSHVHRNLMHKISRISVDLAVPGTSSQPCGSGQGPSGGPRDGSGHSDGNHSSVSSEGFCENEEEMQASGGDTDSHSSSSPSASSDDATRRISQDDSVSDDECQLYYYDSAAARRLELNSASGGGTSSSWTASGWECGWEVQFARAEGLQAHGRAREASALGAALARELLARPPVLHAPHDPRRPRKKHAVSPRLCAASHRLSCLASATLAKCAFLCTVLAEFSEHHELAFRVGLFALEMARPPASTKALEVKLNNQETELVALLKKLPTGAEQLTLAREKAEQLRDGVLKNRGPALLPIALASFLFEVLVLSATDKENKHPARLTSDEMLGFEAAVAALGLKANVSEAEHPLLCEGTRRQRGELALTLLSFYKDDPVKLARIMNKLLDRDIHQLTKGPMVSMYYMNNPRLAAYRSDVSAVPLYPPLYPPHAHAHQHQHTIPHPIPIPPPCIPPVPVQVQCPLVSDMERLSLSEGGPSPPSHLHMHTHALHAPHVTHVSHTTHVPHTTHGQHNTHVSHVTHVPHTPHSSHVPHTTHVLQTTTHVPHTTHVPHTTHLPHTSHVQHTSHVQHSSHSQHTTHGPHSSHTSHGQPHMSSHVAITRSKDSRYKGKRQYPSVPNQPSEASAHFMFELAKSVLFKAGGSSSTSLFTQTSCAREHHGPHRGLHMAAFQLGLYALGLLNCVSANWLSRTYSSHVSWITGQAMDIGAPAILFLINAWEGHLTPPEAASIADKASSGRDVHTVRAAAELALSVLPHAHALNFNEIQRAVLQCKEQSDSMLERACLIVEEAAKGGGVYPEVLYTVARYWHELYLRQPGDEAEHDEPQYRPAPLPAPLPVPYPIPYPFTYHAYPPPIYQLQFLDPQYGGAGGAQYALPPPYFVRGIAPPPIAVNVSVHSTHAPPLAAPLPPPAPAPPAPPPPAPANSSSPSNQAQLRRLLSAYRVGMLALETQARRVHDDRPQNKNPPYGEHVKWLLRISKQLGTQYLHQFCVSAVNSVVSPFVLYELCVESAHWLARGGPHHMVMQHLRGTLAPLVHKCQQMSKSCKKDLWTQLNAALQTNGK

Summary

Uniprot
NA  
ProteinModelPortal
NA  

Ontologies

KEGG
101735640    no KO assigned | (RefSeq) zinc finger SWIM domain-containing protein 8-like
GO
GO:0008270   GO:0006241   GO:0006221   GO:0000387   GO:0000398   GO:0005685   GO:0003677   GO:0005515   GO:0016742   GO:0003824  

Topology

Length:
1594
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.26708000000001
Exp number, first 60 AAs:
0.11752
Total prob of N-in:
0.01340
outside
1  -  1594
 
 

Population Genetic Test Statistics

Pi
272.765595
Theta
190.421532
Tajima's D
1.379548
CLR
0.212974
CSRT
0.759762011899405
Interpretation
Uncertain
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