Silkworm Genome Informatics Database

Gene

KWMTBOMO05015

Annotation

short_neuropeptide_F_precursor_[Bombyx_mori]

Location

Bomo_Chr9(+):5579378-5612041 View in EpiBrowser

Full name

Short neuropeptide F

Location in the cell

Extracellular Reliability : 1.379 Mitochondrial Reliability : 1.193 Nuclear Reliability : 1.154

CDS

ATGTCTCGGAGTTTCGTGTTTGCCCTCGCACTGTTCGGAATGGTGGCAGTTTTACCTTTGCCCGCAGCAAATGCTCAGGCGTTATCGAACTACGATGCGTCACCTGCAACATTCGAGAGCCGGAATAACTGGGATGCACTGGGAGGGCTCTATGCTCTTCTGGCCCAGCACGACGCGCTCGGCGGACACGCGCTGGCCCGCAAGTCTGTTCGATCGCCATCCCGACGCCTGCGTTTCGGCCGCCGATCAGATCCCGACATGCCACCTCAAGCTCCTATTGACGAGATGGATGAGCTGCTCTCTCTCCGCGAGGTCCGCACCCCGGTCCGCCTACGCTTCGGACGCCGCTCTGACGAACGCGCTGTGCCACATATCTTCCCTCAGGAGGAGCAGGATCGCGCTGTGCGAGCCCCTTCCATGCGTCTACGATTCGGCCGCCGATCTGACAACAATATGTTCTTAATGCCATACGAGTCTGCTCTGCCTAAGGAAGTGAAAGCTAGCGGCTCCGTGGAAGATGATAGACAACAAGAATAA

Protein

MSRSFVFALALFGMVAVLPLPAANAQALSNYDASPATFESRNNWDALGGLYALLAQHDALGGHALARKSVRSPSRRLRFGRRSDPDMPPQAPIDEMDELLSLREVRTPVRLRFGRRSDERAVPHIFPQEEQDRAVRAPSMRLRFGRRSDNNMFLMPYESALPKEVKASGSVEDDRQQE

Description

Plays a role in controlling food intake and regulating body size.

Similarity

Belongs to the NPY family.

Keywords

Amidation Cleavage on pair of basic residues Direct protein sequencing Neuropeptide Secreted

Feature

peptide sNPF peptide 1

Uniprot

B3XXL1 A0A2A4JC00 M4QNT7 A0A385H8Z5 A0A2A4JAG7 A0A0S1U0X3 + More
A0A0S1U0T9 A0A2H1VF59 A0A0N1IN65 A0A212EH96 A0A194QR88 C0HKV9 A0A0C5BC80 A0A3S2LCF7 A0A0U1WT41 A0A1I8PLL3 A0A023EIP5

Pubmed

18725956 30171635 26354079 22118469 29466015 25640113 + More
24945155

EMBL

HQ703960 AB330419 ADW08938.1 BAG68397.1 NWSH01002177 PCG68960.1 + More
KC340936 AGH25568.1 MH028127 AXY04296.1 PCG68961.1 KT005991 ALM30342.1 KT005990 ALM30341.1 ODYU01002249 SOQ39483.1 KQ458665 KPJ05604.1 AGBW02014920 OWR40854.1 KQ461198 KPJ06051.1 KJ783492 AJM76781.1 RSAL01000238 RVE43698.1 JQ646093 AFW19647.1 GAPW01004285 JAC09313.1

Proteomes

UP000218220 UP000053268 UP000007151 UP000053240 UP000283053 UP000095300 + More

PRIDE

B3XXL1

ProteinModelPortal

B3XXL1 A0A2A4JC00 M4QNT7 A0A385H8Z5 A0A2A4JAG7 A0A0S1U0X3 + More
A0A0S1U0T9 A0A2H1VF59 A0A0N1IN65 A0A212EH96 A0A194QR88 C0HKV9 A0A0C5BC80 A0A3S2LCF7 A0A0U1WT41 A0A1I8PLL3 A0A023EIP5

KEGG

100174974 no KO assigned | (RefSeq) sNPF; short neuropeptide F

GO

GO:0007218 GO:0005576

Subcellular location

Secreted

SignalP

Position: 1 - 25, Likelihood: 0.987568

Length:

178

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.69014

Exp number, first 60 AAs:

21.74454

Total prob of N-in:

0.80204

POSSIBLE N-term signal

sequence

inside

1 - 4

TMhelix

5 - 27

outside

28 - 178

Pi

279.029723

Theta

180.243116

Tajima's D

0.517541

CLR

1046.766643

CSRT

0.52302384880756

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics