Gene

KWMTBOMO05013  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008117

Annotation

PREDICTED:_vacuolar_protein_sorting-associated_protein_13C_[Bombyx_mori]

Location

Bomo_Chr9(+):5474781-5520126      View in EpiBrowser

Full name

Vacuolar protein sorting-associated protein 13      

Location in the cell

Cytoplasmic   Reliability : 1.71 Nuclear   Reliability : 1.33

CDS

ATGAAGCACCACAGGGAGGGGCACAGCGTCATACCCATGCTGGAAACGCCCGATGTGGTTGCTATGGAAACGGAGGCTAATGCCGATAATGCTTGCGTCGATAAGGACAAGTACTTGTTCGCCGTCACTTACAGTAATGTCGACAAAAAGTGTCCAGAATTCCGCAGTCACTATGGTTCAGTAGAACAACTGATCGAGCTTGACTTCACCAACTTACGAGTGTTGCTGCATCTGCAAGGCTTACAAGAGATTTTGGTTATCGTCAATGAATACCAGACAAGACTACAAGCCATTCAGAGCACGGTTGATAGAACAGCCCACGCCGGACCTCTCGAAACCATTATGGAGGATGAAGAATTCTCTGCAGCCAAATCTAAAGTGAACGTTACAAAACCGGCTCGCCGTAAGCAAATTGAGAGCATACAGTTGAAAGTGAACGTTAAAATCGGCGCCATAGAGATCGGATTCGCCACAGACAAGCGTCCCTTGTCCGTGGTGAGACTGCAGGGTGCCACTGCCGGACTTGTCCTAAAGAGTTCATATACGGAAGTCGATTGTGCGATGGCGTCTATTAAAGTGGAAGATCTTAATCCTGTTACAATTCATAAAGAGATATTGAAAGTGCTCGGCGGTGATGTTATAAAGCTAAAAATAGTGTTGTACAATCTGGAGCACTATCCGACTGTGAGCGACGTGAACATGTCCGTCGATGCACAGATCAATTGTTTGCGTATCGTGTTCCTGAATTGGTACGTCAGTTCTATGCTGGAATTCTTGAACAATTTCCAAACAGCTCAGCAAGCCATCATCGACGCGTCGTCGCAGGCCGCGGACGCCGCGAAGGCCAACGTGCAGAGCGCCTACCAGAACTCGACGAAACTGTCGCTGAAAGTTCGTCTGGCCGCGCCCATTATCGTCGTGCCGGAGAACTCGAAGAGCCTAAACGCCATGCTGATCGATCTGGGACGAATGAACCTTAATAATCGGTTCGTCGACTTACCTGTTGCGGATGTGAGCAATAAAGTAACAGTGGACGAACTGACTCTTGAACTTGAAGACATGAAGGTGTCTTGCGTTGAACTAACGGACGAGCACCAAGAGTACAGCTACGAAAGGAAGCTGCTACGACCGACCAGCTTCAAACTCTTCGTCAAACGAAGCCTGTCTTCCTGGTATGAAGCGTTGCCCGACTTGGATATATCTGGCAGAATGAAGACGATTGCTATAACCATAGGCCACAGCGACTATAAGAGTATCATGAAAATTCTGAACCAAAACCTCCAAGAAGGGCAGAGCAAAGTGGAGGAAACGAAAGTGCCTCCTAATTTACAGAGGTCAACATCTAAGCCTGCCGTCAAAACTCAGACGAGCAAAGGGCAAGTGAAGTCCACCACGGCTGTGGTCAACACGAACGACACAAAGAAACCCAGGACCACCATCAAGTTTATGTTCACCATGGATAGCTTCGTCATAGATCTCATGAACACGACTAGTTCAGCAGACACCATGTTCACGAAAGACGTGGAGCTGGCCCGTTTCTGCCTCGCGCTTCTGTCCGTGAAGGGGCGCATGTTCTCGGACAGCTCCATACATACGTCAGTCTTATTGGTCGACTGCACGCTGGACGACACGCGGCCTGGGCGCGGCGCCAAGATCACAAGGTACCTGGAGCGACGAAGAGAAAAACGCGAAAGATCCGTAGACGAGGACGGATCGCAGAACGCTATTATGGAAGCGCACGATAAAATTCGCAGCATGATCGACATAACATACACTATGAAGAATTCCGATACTTTCATCGACATGAGAATATTCAGTTTCAATCTGATTCTGGCGATGGACTTTTTGAACAAGATTGCGGAGTTCATGACGACGGGGCTCGCCGCGGAGACGCCCGCCGACGCGAAAGACGAACTTAAACAAGTCAAAACCGCCGACAAATCTGTGGAGGCTTCGCGCAAGAAAATATCATCAGTAGCTCCGACAACAACAACGGAAACACCGAAGCTATCGATGATGACTGTAAACATCAAAATTGAACAACCGGATATTATTTTGGTCGAGTCGCTCGAGCAGAAGAAATGTGACGCTCTAGTTTTGAATATGGAAGCTCGGTTTAAGCTTCGACAAAGCTCCGAGCGTATGGTCGCGGAAGGCGGTATCTCCGGTCTGCAGATGGTCATTAGGACCATCGGACAGGAAGACCGACCGTCGACGCCGCGGTACCTGTTAGCTCCGACGCATCTCTCGCTGGCGCTCTCGCAGCCTCCGGATAGCGGGATGCACGTGGATCTGTCCGTCACCGATATTAAAATCACTGTTTCACCAGATATCATAGCGCTGCTGAATCGAGTATTGGCAACGATGACAAGTCGAGAGGAGGACAACGGGGAACAAGAGCTCAAAGCCATCATCTACCACAACCTCTGGGATATACAGCCTCTAAAACCGAACGCGCATTGGTATTTAAAAACTGAGGTAGCCCAAGAGGCTATCAATCTCGAAGAGCAATGCCCCGAAGTGACGACGAAGCCGCCCGTCGGGGAGATATGCTTGCTGTCCAGTCCGTCCATCATAGTTTCGTTAGAGATGGACATCGGCAATGAAACCATCCCCGTCCTAGTGATGCAAGCCTCGCTCAGCGGACAAGTTAAGGATTGGAGCTCGGATCTCTACCTGGAGTCCACGTGGGCCATGCAGGTCTCGTACTACAACATGGGCCGCGCGGTCTGGGAGCCGCTCATCGAGCCCGTCGAAGTCATGAAAGATTACCAGTACAAGCATATTCCGTGGGAACTTAAAATGGAGGTGATGATGCGACCACAAGAACAGCTGCAGATCGACACGGGAGACGAGGCCGCAAACTTCAAAGCCGTCGCTCAGAGACAAGCGAATAAAATCGTCACGATATCGAGCGTCGAACCTTTGGAAATTACTATCACTAGAACCGGAATGGAGGTTCTGTCCCAACTTGGCAACTCATTCTCAGCAGCCATCGCAGATACATCTGACTCTTCTGTTGTATCGAAATCAAAGTCTGATGACCAAATGGCGAAGAAGAAATTCTATGGTGCCCCGTACGTTTTGCACAATTTTACCGGCCTGACCGCCAGGCTAATGTTACAAGACAACCACGACTTCTCCGTATTTATCGTCGAAGACAAAAGTGTTTCTGACTATAGGGAAGTCGTTTTGGAGTCGGGCGCGTGCGTACCGCTTCAGTTGAAGCATGGCGGTCTGAATATGATGAAACTTAACGAACCCCCACCGCCCCTGAAGTTAAATGTTAAGATTGTGGAAATAGATGAAGACCTTCAGATACCCGTCGAACGTGCCGACAAAAGGTACTTCACTCTGGGCCGGAAACTCACCAGCGGCACTATGGAGAGGAACGTGCCTCACGTAGCAGCCGCCGAGCCGCGGGGACTCATCTCGGACGTGGTCATGCAAGATGCAGCCTTGCACATCTATCTGCGCAGTGTCGTGCAAGTAACAAACACATTATCCGTCAATGTATCGGTATACTACATGACATTGAGCGGAAACGAAGTCAGATTGTTAGGGGAAGTCCCGCCCGGCGAAATACTAAGGCTTCCGCTGCAAGCCGTGCACACACCAACCGCAGAAATATTTTTCTCCGTCGAAGGTTTCACCGTGTCGGTGTCGCCCTTCGTCTGGCGCGAGCTGCAGCAAGAAGTCAGGATCGCTAAACTACTTCAGTGCAACTCGAAAGATAAAGCTAGCGGTGAAAAGTTCTATATCAAAGCCATAGGGACCATGGAGCAAGTGTTCTACGAGCACTCGAACCGTCACACGTTCGCGTCGTCTTGCTACGACATCGTCCTGAAGCCGGCGGTCAAGCTACAGAACTGTCTGCCGGTCGACATCGTCGTGTCCCAGTTGGGCCTCAAGCGCACGCAGACCTTCAAGCCGGGTGAAATGTTCCACTTATCGCACTTGGCGCCGAATAAAGCATCGATCGTTATTATGATACAAAACTATTTGGAGAAGTGCTGGGTGTGCACGAAAAATCTCCCCGAGGCCGAGATGGAGTTGTCGGTGTGGTCGTTCGAGTCGCACGACAGTCCGTCCGTGATGACGCTCGAGCTGGGCATGTGCAGCGCCGACACGGACGGCACGCAGATGCTCTCCCTGTACTGCCCCTTCTGGATGCTCAACAAGACCGGCTTCACCCTGTGCTATAGAAAATCAAAGAAACCAGAAAAAGACTCCAGCACGCCGAACAAGAATGTCGACGAAACTGGAAATGTCATCTTTCATCCGAAAGACTACAAGGAACCGATACTATTCTCGTTCCGGGCGAAGAACTTCTTCGGCAAGAAAAAAGCTGCGATCAGAGTTGAATTCGGCGAATGGTCCGATAAGTTCTCGTTAGATGTCCCCGGCAGTTCCGGTGTCGTCATATGTAAACACGAAGGAAGGACTTATCAAGTCGCGGTCACTAATCAGTTGACGTACAACAGCCTCACTAAGATGGTTATATTCACTCCGTACTTCCTGATCATCAACGAAGCGCCGCTCGCTATCCAGTACCAAGAGCTGCACAGGTCGGGAGATCCGTGGAGAGAGGTGGAGCAGAACTCCAGTGCTCCGTTGTGGCCGGTGGTCGAGAAAGAAGACAAACTTCTCCTGTTGAGAGTGGCTGGTTCTACGGAACACGCGGCGCCCTTCCTCTACACAGAACAGAATAGCGTTTGTTTGAAATTGAAAAATGAGTATGGCGGTCTACACGTCGAAGTTCAGTTGAGTGAGGGAGGCACGTACATAACGATACGCCAGTACCGGGACGGCCACGCGCCGGCGCTGCTCGTCAACTACTCGCCGCACGCGATCACCGTGTACGAAAAAGAAAACGTTAATAGCGTGCAAATTCCGTCCATGCACAAAATGTTTTACACTTGGGACAATCCAGCCGGACCGCGCGTCCTTATATTCGAAGGGCACAAACGAAAGGAAGTCGAAAACGATCTTAGAAAAGATGGCATCGGTGATTTCATGATCACCGAAACGTGCCGCGTCTCGTGGGTGTCGTTCCTGGACGGTCTCCAACGTGTGATTTTGTTCACCGACGACCCGATACTGGCGAGCGGCGCCTACTCCATCGGGGAAGTGGAGGCCATCGACATGGAGATCGTGCTGTCCATGCAGGGGATGGGCCTCTCGCTAGTTAACGATCACGAAATGCTCGAGCTCCTCTACATCAGCATATCCAATTCAGGAATCGTATGGGAGCAATGTAAGATCGGTGCCCGTCGCTACAAGAAGATAGAGGGACAGAAAGTGGTTCAATTCGAAGAGGCGTACCAGAGGTACTTGGTCGAGAAGATGGTCAGCGACGAACCCGCTCAGAAAGCTATTGTGCAGATCGATGAAAAAACAGAGGTGAACTTCGAGGAGATGCGCATCCTGAAGCCGACGCCGCGCCTGCTGCGCCGCACGCTGGAGGCGGGGCTGTGGGCGTCGTACAGTCTGTCGGCACACTCGCGCCGCCTGCACGCGCGCCTGCACCGCCTGCAGCTCGACCAGCAGTTGCCGCTGCCCACCTTCCCCGTGGTGCTGGCGCCCGTGCCGCCGCCCAGATCCGTCGCCAACGACGACCCCAACGGTATGAAACCGTTCATTGAAGTATCTATAGTAGAGCGGATCATGGAACACAGTAAAGTGCGCCAGTACAAATACTACAAGATGCTAATACAAGAGTTCCACGTGAAAGTCGACATGGGACTCATCAATGGTCTAATGGCGATGTTCCCGCAACAAGTACCCACCGAACAGGAAGCGTTGGAAGCTTTTAGACTTGATTTAGAGAAAGCTGGACAACCACTAGAAGCTCTGGCAGCTTTAGGGGCTGCGTCTGATCAAAAGAACTTCTATGACAACTTGCATTTATCGCCACTCAAGGTCCACGTGTCATTCTCCCTCGGAGGAGCGACTCAGCTGCCCACATTCGTCGGCACGCTGCTGCAGAGTATCGGCGTAACTTTAACAGACATGAACGATGTTGTCTTTAAATTATCTTACTACGAGCGCAACTACGAATTCTTATCGCAAAAGGAATTGATAGGTCAAGTGCAAAGCCATTACACGGGACAAGCTCTGAAACAACTATATGTGCTGGTGCTCGGCTTGGATGTTATCGGGAATCCGTACGGCCTGGTCGTCGGCTTAAAGAAAGGAGTCGAGGATCTCTTCTACGAACCATTCCAGGGTGCCATCCAGGGTCCGGGCGAATTCGCGGAAGGGCTGTTCCTTGGCGTGCGCTCCCTCGTCGGACACACGGTGGGCGGCGCGGCGGGGGCTGTCTCCCGCATCACGGGCGCCATGGGACACGGGCTCGCCGCGCTCTCGCTCGACAAGGACTACCAGCGACGCCGCCGCGACAACATCAACAAACCACCGGCCAATCTTCAAGAGGGACTCGCCCGAAGCGGCAAGGGCCTAGTTATGGGAGTGTTCGACGGGGTAACGGGAGTGTTCACGAAGCCCATAGAGGGCGCCCGCGACCAGGGCGTCGAGGGATTTTTCAAGGGTCTGGGTAAAGGGGCCGTGGGCCTGGTCGCGAGGCCCACCGCTGGGGTCGTGGACTTCGCGTCCGGTTCACTCGACGCCGTAAAGAGGGCGGCCGATATGTCTGAAGAGGTCACCAAACGCCGTGCCGCCAGGTACCTGCCTCCCGATACCGGAGTGAGGCCTTACTCGAGATCTCAGGCCGAAGGTTATAAAATGTTGTTCGAACTCGAGAAGGGTAAATACGTGACTACGGACACGTACGAAGCTCACGTGTGGGTGATCCCAGCCAAGGAGGTGGTCGTCTGCACCGACAAAAGAATTTTGTATTTGGAGAAGAATAACGTGTTCGGGGGTTGGCAGATCGTCTGGACTTACCTATGGACCGAACTGCCGGAAGTGCCGTCGCCTGTCAACAAGGGCGTTTACATTCCCACAGCCAAGAAGAAAGTACTAGGAATGTTCTCGAGTTCCGGCTCGGGGAAAGTTATACTACTTTTTGACGAACAACAGAAGAAATACTTGCTGACTCAGTGTCAACGGCTCATGAGCTCGGCCCGTTGA

Protein

MKHHREGHSVIPMLETPDVVAMETEANADNACVDKDKYLFAVTYSNVDKKCPEFRSHYGSVEQLIELDFTNLRVLLHLQGLQEILVIVNEYQTRLQAIQSTVDRTAHAGPLETIMEDEEFSAAKSKVNVTKPARRKQIESIQLKVNVKIGAIEIGFATDKRPLSVVRLQGATAGLVLKSSYTEVDCAMASIKVEDLNPVTIHKEILKVLGGDVIKLKIVLYNLEHYPTVSDVNMSVDAQINCLRIVFLNWYVSSMLEFLNNFQTAQQAIIDASSQAADAAKANVQSAYQNSTKLSLKVRLAAPIIVVPENSKSLNAMLIDLGRMNLNNRFVDLPVADVSNKVTVDELTLELEDMKVSCVELTDEHQEYSYERKLLRPTSFKLFVKRSLSSWYEALPDLDISGRMKTIAITIGHSDYKSIMKILNQNLQEGQSKVEETKVPPNLQRSTSKPAVKTQTSKGQVKSTTAVVNTNDTKKPRTTIKFMFTMDSFVIDLMNTTSSADTMFTKDVELARFCLALLSVKGRMFSDSSIHTSVLLVDCTLDDTRPGRGAKITRYLERRREKRERSVDEDGSQNAIMEAHDKIRSMIDITYTMKNSDTFIDMRIFSFNLILAMDFLNKIAEFMTTGLAAETPADAKDELKQVKTADKSVEASRKKISSVAPTTTTETPKLSMMTVNIKIEQPDIILVESLEQKKCDALVLNMEARFKLRQSSERMVAEGGISGLQMVIRTIGQEDRPSTPRYLLAPTHLSLALSQPPDSGMHVDLSVTDIKITVSPDIIALLNRVLATMTSREEDNGEQELKAIIYHNLWDIQPLKPNAHWYLKTEVAQEAINLEEQCPEVTTKPPVGEICLLSSPSIIVSLEMDIGNETIPVLVMQASLSGQVKDWSSDLYLESTWAMQVSYYNMGRAVWEPLIEPVEVMKDYQYKHIPWELKMEVMMRPQEQLQIDTGDEAANFKAVAQRQANKIVTISSVEPLEITITRTGMEVLSQLGNSFSAAIADTSDSSVVSKSKSDDQMAKKKFYGAPYVLHNFTGLTARLMLQDNHDFSVFIVEDKSVSDYREVVLESGACVPLQLKHGGLNMMKLNEPPPPLKLNVKIVEIDEDLQIPVERADKRYFTLGRKLTSGTMERNVPHVAAAEPRGLISDVVMQDAALHIYLRSVVQVTNTLSVNVSVYYMTLSGNEVRLLGEVPPGEILRLPLQAVHTPTAEIFFSVEGFTVSVSPFVWRELQQEVRIAKLLQCNSKDKASGEKFYIKAIGTMEQVFYEHSNRHTFASSCYDIVLKPAVKLQNCLPVDIVVSQLGLKRTQTFKPGEMFHLSHLAPNKASIVIMIQNYLEKCWVCTKNLPEAEMELSVWSFESHDSPSVMTLELGMCSADTDGTQMLSLYCPFWMLNKTGFTLCYRKSKKPEKDSSTPNKNVDETGNVIFHPKDYKEPILFSFRAKNFFGKKKAAIRVEFGEWSDKFSLDVPGSSGVVICKHEGRTYQVAVTNQLTYNSLTKMVIFTPYFLIINEAPLAIQYQELHRSGDPWREVEQNSSAPLWPVVEKEDKLLLLRVAGSTEHAAPFLYTEQNSVCLKLKNEYGGLHVEVQLSEGGTYITIRQYRDGHAPALLVNYSPHAITVYEKENVNSVQIPSMHKMFYTWDNPAGPRVLIFEGHKRKEVENDLRKDGIGDFMITETCRVSWVSFLDGLQRVILFTDDPILASGAYSIGEVEAIDMEIVLSMQGMGLSLVNDHEMLELLYISISNSGIVWEQCKIGARRYKKIEGQKVVQFEEAYQRYLVEKMVSDEPAQKAIVQIDEKTEVNFEEMRILKPTPRLLRRTLEAGLWASYSLSAHSRRLHARLHRLQLDQQLPLPTFPVVLAPVPPPRSVANDDPNGMKPFIEVSIVERIMEHSKVRQYKYYKMLIQEFHVKVDMGLINGLMAMFPQQVPTEQEALEAFRLDLEKAGQPLEALAALGAASDQKNFYDNLHLSPLKVHVSFSLGGATQLPTFVGTLLQSIGVTLTDMNDVVFKLSYYERNYEFLSQKELIGQVQSHYTGQALKQLYVLVLGLDVIGNPYGLVVGLKKGVEDLFYEPFQGAIQGPGEFAEGLFLGVRSLVGHTVGGAAGAVSRITGAMGHGLAALSLDKDYQRRRRDNINKPPANLQEGLARSGKGLVMGVFDGVTGVFTKPIEGARDQGVEGFFKGLGKGAVGLVARPTAGVVDFASGSLDAVKRAADMSEEVTKRRAARYLPPDTGVRPYSRSQAEGYKMLFELEKGKYVTTDTYEAHVWVIPAKEVVVCTDKRILYLEKNNVFGGWQIVWTYLWTELPEVPSPVNKGVYIPTAKKKVLGMFSSSGSGKVILLFDEQQKKYLLTQCQRLMSSAR

Description

Plays a role in the survival of neurons by maintaining protein homeostasis in the central nervous system. May function as part of a lysosomal degradation pathway.

Similarity

Belongs to the VPS13 family.

Keywords

Complete proteome   Endosome   Membrane   Protein transport   Reference proteome   Transport  

Feature

chain  Vacuolar protein sorting-associated protein 13

Uniprot

H9JF20   A0A3S2LSU5   A0A0N0PAP2   A0A212EH99   A0A194QM57   A0A1E1WNG3   + More
A0A1E1VZK4   A0A1Y1M0H6   A0A067RTP5   A0A195CYF9   E1ZV01   A0A195B550   A0A158NM97   E2B476   A0A3L8DLF8   A0A151JQF4   A0A151JY96   A0A2A3EL42   A0A026WHS8   K7IXV4   A0A0T6BDC0   A0A1Q3FGM4   W4VRJ2   A0A1Q3FGD3   B0WUG9   A0A182G3T1   Q16SR9   A0A1B6D8Z4   A0A182PLD4   A0A182RA29   A0A1B6CUA0   Q5TSU0   A0A182YFP8   A0A182X4A3   A0A182JW81   A0A182HPA7   A0A182VBQ3   A0A182WB65   A0A182NLZ6   A0A182TV09   A0A182QNC8   A0A2M3YXY5   A0A182IQ42   A0A1B0DB55   A0A2M3YY10   A0A069DYI3   A0A2M4CVW7   A0A1J1ITZ1   A0A2M3YY08   A0A224XG50   A0A2M3ZZL3   A0A1B6F435   A0A2M3ZZF8   A0A182FL84   A0A1B6F8B5   A0A2M3ZZT4   B4MIP9   F4WHS0   B4J7Y5   A0A0M4EAE9   B3N9W8   A0A3B0J2N7   A0A0L0C3R9   A0A3B0J766   A0A0P8XPG8   B3MHR1   B4H8J1   A0A0A1WPJ5   Q28YJ6   A0A0K8U502   A0A0K8U197   A1Z713   B4LJ91   A0A0J9R7H7   W8AJ52   B4KPQ2   A0A1I8NHV4   A0A1I8PU10   T1P7V0   B4P1S0   A0A023EZM1   A0A3B0J6P6   A0A146KJH5   A0A146KJR5   A0A0P6JRN7   A0A2H8TPG9   J9K7I7   A0A1B6LDL1   A0A1B6KWT9   A0A0P5SZT1   T1J4H6   A0A0P5ZF77   A0A0P6C221   A0A0N8ATD0   A0A0P5CYW9   A0A0N8AEF3  

Pubmed

19121390    26354079    22118469    28004739    24845553    20798317    + More
21347285    30249741    24508170    20075255    26483478    17510324    12364791    25244985    26334808    17994087    21719571    26108605    18057021    25830018    15632085    10731132    12537572    28107480    22936249    24495485    25315136    17550304    25474469    26823975    26999592   

EMBL

BABH01033962    BABH01033963    BABH01033964    BABH01033965    BABH01033966    BABH01033967    + More
RSAL01000238    RVE43697.1    KQ458665    KPJ05606.1    AGBW02014919    OWR40856.1    KQ461198    KPJ06050.1    GDQN01002587    JAT88467.1    GDQN01010879    JAT80175.1    GEZM01043725    JAV78881.1    KK852470    KDR23219.1    KQ977171    KYN05179.1    GL434335    EFN74999.1    KQ976604    KYM79405.1    ADTU01020182    ADTU01020183    GL445515    EFN89493.1    QOIP01000007    RLU20668.1    KQ978684    KYN29306.1    KQ981561    KYN39826.1    KZ288226    PBC31869.1    KK107238    EZA54619.1    LJIG01001609    KRT85331.1    GFDL01008393    JAV26652.1    GANO01002385    JAB57486.1    GFDL01008441    JAV26604.1    DS232105    EDS34951.1    JXUM01007029    JXUM01007030    KQ560229    KXJ83724.1    CH477667    EAT37516.1    GEDC01015135    JAS22163.1    GEDC01020311    JAS16987.1    AAAB01008900    EAL40459.3    APCN01002939    AXCN02000957    GGFM01000391    MBW21142.1    AJVK01000756    AJVK01000757    AJVK01000758    AJVK01000759    AJVK01000760    GGFM01000393    MBW21144.1    GBGD01000007    JAC88882.1    GGFL01005306    MBW69484.1    CVRI01000059    CRL03731.1    GGFM01000390    MBW21141.1    GFTR01008996    JAW07430.1    GGFK01000620    MBW33941.1    GECZ01024835    JAS44934.1    GGFK01000558    MBW33879.1    GECZ01023287    JAS46482.1    GGFK01000690    MBW34011.1    CH963719    EDW71988.1    GL888167    EGI66277.1    CH916367    EDW02215.1    CP012524    ALC42034.1    CH954177    EDV59664.2    OUUW01000001    SPP75724.1    JRES01001012    KNC26144.1    SPP75722.1    CH902619    KPU76493.1    KPU76494.1    EDV36898.1    CH479223    EDW35026.1    GBXI01013984    JAD00308.1    CM000071    EAL25969.3    GDHF01030653    JAI21661.1    GDHF01032284    GDHF01032031    GDHF01022201    GDHF01021484    JAI20030.1    JAI20283.1    JAI30113.1    JAI30830.1    AE013599    CH940648    EDW61527.1    CM002911    KMY92020.1    KMY92021.1    GAMC01020799    GAMC01020798    GAMC01020797    GAMC01020796    JAB85757.1    CH933808    EDW09162.2    KA644701    AFP59330.1    CM000157    EDW89206.2    KRJ98276.1    GBBI01004017    JAC14695.1    SPP75723.1    GDHC01021896    JAP96732.1    GDHC01021798    JAP96830.1    GDUN01001099    JAN94820.1    GFXV01003333    MBW15138.1    ABLF02021408    ABLF02021409    GEBQ01018189    JAT21788.1    GEBQ01024054    JAT15923.1    GDIP01132966    JAL70748.1    JH431845    GDIP01045529    JAM58186.1    GDIP01022354    JAM81361.1    GDIQ01244819    JAK06906.1    GDIP01185809    GDIP01179708    JAJ43694.1    GDIP01155513    JAJ67889.1   

Proteomes

UP000005204    UP000283053    UP000053268    UP000007151    UP000053240    UP000027135    + More
UP000078542    UP000000311    UP000078540    UP000005205    UP000008237    UP000279307    UP000078492    UP000078541    UP000242457    UP000053097    UP000002358    UP000002320    UP000069940    UP000249989    UP000008820    UP000075885    UP000075900    UP000007062    UP000076408    UP000076407    UP000075881    UP000075840    UP000075903    UP000075920    UP000075884    UP000075902    UP000075886    UP000075880    UP000092462    UP000183832    UP000069272    UP000007798    UP000007755    UP000001070    UP000092553    UP000008711    UP000268350    UP000037069    UP000007801    UP000008744    UP000001819    UP000000803    UP000008792    UP000009192    UP000095301    UP000095300    UP000002282    UP000007819   

PRIDE

H9JF20    A1Z713   

Pfam

PF12624   Chorein_N        + More
PF06650   SHR-BD
PF16909   VPS13_C
PF16910   VPS13_mid_rpt
PF16908   VPS13
PF01027   Bax1-I
PF09333   ATG_C

Interpro

IPR031645   VPS13_C        + More
IPR031642   VPS13_mid_rpt       
IPR031646   VPS13_N2       
IPR026854   VPS13_N       
IPR009543   SHR-BD       
IPR026847   VPS13       
IPR006214   Bax_inhibitor_1-related       
IPR015412   Autophagy-rel_C       

ProteinModelPortal

H9JF20   A0A3S2LSU5   A0A0N0PAP2   A0A212EH99   A0A194QM57   A0A1E1WNG3   + More
A0A1E1VZK4   A0A1Y1M0H6   A0A067RTP5   A0A195CYF9   E1ZV01   A0A195B550   A0A158NM97   E2B476   A0A3L8DLF8   A0A151JQF4   A0A151JY96   A0A2A3EL42   A0A026WHS8   K7IXV4   A0A0T6BDC0   A0A1Q3FGM4   W4VRJ2   A0A1Q3FGD3   B0WUG9   A0A182G3T1   Q16SR9   A0A1B6D8Z4   A0A182PLD4   A0A182RA29   A0A1B6CUA0   Q5TSU0   A0A182YFP8   A0A182X4A3   A0A182JW81   A0A182HPA7   A0A182VBQ3   A0A182WB65   A0A182NLZ6   A0A182TV09   A0A182QNC8   A0A2M3YXY5   A0A182IQ42   A0A1B0DB55   A0A2M3YY10   A0A069DYI3   A0A2M4CVW7   A0A1J1ITZ1   A0A2M3YY08   A0A224XG50   A0A2M3ZZL3   A0A1B6F435   A0A2M3ZZF8   A0A182FL84   A0A1B6F8B5   A0A2M3ZZT4   B4MIP9   F4WHS0   B4J7Y5   A0A0M4EAE9   B3N9W8   A0A3B0J2N7   A0A0L0C3R9   A0A3B0J766   A0A0P8XPG8   B3MHR1   B4H8J1   A0A0A1WPJ5   Q28YJ6   A0A0K8U502   A0A0K8U197   A1Z713   B4LJ91   A0A0J9R7H7   W8AJ52   B4KPQ2   A0A1I8NHV4   A0A1I8PU10   T1P7V0   B4P1S0   A0A023EZM1   A0A3B0J6P6   A0A146KJH5   A0A146KJR5   A0A0P6JRN7   A0A2H8TPG9   J9K7I7   A0A1B6LDL1   A0A1B6KWT9   A0A0P5SZT1   T1J4H6   A0A0P5ZF77   A0A0P6C221   A0A0N8ATD0   A0A0P5CYW9   A0A0N8AEF3  

KEGG

101737991    K19525 vacuolar protein sorting-associated protein 13A/C | (RefSeq) vacuolar protein sorting-associa

GO

GO:0016021   GO:0006623   GO:0045053   GO:0005623   GO:0019898   GO:0019538   GO:0031902  

PANTHER

PTHR16166  

Subcellular location

Late endosome membrane  

Length:

2363

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.21919

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00077

outside

1  -  2363

 

 

Pi

232.334505

Theta

179.703162

Tajima's D

0.95249

CLR

0.25621

CSRT

0.646917654117294

Interpretation

Uncertain