SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05011  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008117
Annotation
PREDICTED:_vacuolar_protein_sorting-associated_protein_13C_[Bombyx_mori]
Full name
Angiotensin-converting enzyme       + More
Vacuolar protein sorting-associated protein 13      
Location in the cell
Cytoplasmic   Reliability : 3.024
 

Sequence

CDS
ATGGTATTTGAGTCTATTGTGGTTGATGTCCTGAACAGATTCCTCGGTGATTATGTAGAGAATTTGAACAGATCACAGTTAAAATTCGGAATATGGGGCGGGGATGTTGTTTTGGAGAATCTGGTACTAAAACAGAATGCTTTGGAGGAGCTGAACATTCCTGTGCAAACAGTTTATGGACATTTGGGTAAACTTGTCCTCAAAATACCGTGGAAGAATCTGTATGGTGCATCAGTGGAAGCTACTATTGAACGACTTTTTTTGATTGTCAATCCATCTGCTGAAGTAAAGTATGATGCTGATAAAGAAGAGAAAATGGCTCTGTCAGCAAAGCAAGCAGAGCTTAGGAGAGTCGAAGAGGCAAAGAAGAAAGAGGCAGAAAAAGATCAAAATAAACTCGACGAGACCTTCGTCGAGAAATTGGTAACGCAAATTATTAAAAATGTTCAATTGAAGATTACCGACATTCACATTAGATACGAAGATAGCATAACCAATCCGAAGACGCCATTTTCTTTCGGTATCACCCTCCACAATCTGTCCGTCCATACCACCGATGAGAACTGGAAAAAGGCTGTTATACAAGAAGCCGTAACAAAAATCTTTAAGATTTTAGATTTAGAAGGTCTGGCGATATACTGGAATCCAAAAACCGATTTATATTCCAAATGCGGCCCCCAAGAAATCAAATCAAAGTTGGAACAAGAAATCGCTACGAAATCATCAAAACCCAGCTTCTATAATTATGCTCTCGGACCAATAAATGCGACCGCGAAACTCAAACTCAATCCAAAGCCTGAAGGTGACACCCCTAAGTTTAGCATCCCCAAAGTGATTTTGGATCTTCACATGGAACAATTGTCTGTAAATTTGAACAAAGCACAGTACCAAGATATGATGCTGCTGGCTGACTCGATGGACAGAATGAGCAAAGGAGCCCCTTACAGGAAATACCGTCCAGACCTAAAATCATTCAGAGGTCACTATAAAGAATGGTGGCATTTTGCTTATAATTGCATTCTCGAAGAAGAAGTTCGCCGTCGCCGTAGAAACTGGAAATGGTCTCATATGTTAGCTCATAGGCAGCTGTGTAAGGATTACGCATCGGCGTATCAAAGCAAGTTGATCAACAAGGGGAAAATATCGCCAGAGCAACAGGCTCTAGTGGAAAAAGCCGAAAAACATTTGGACTTGTTGAATTTGGTTGTTATCAGACAGAGGATTGAATTAGAGGTGGAGCGTCTTGGTAAACTACAACAGGAAGCGAAGAAATCTAAAGGCTGGTTCGGTGGGTGGTGGTCCGGTAGCAGCACCAAGGATGACGAAACTACCGATGGAACCGCGATAATGAAACAATTCGAGAAGGCGATGACTTCAGAGGAAAAGGAGAAACTGTTCCGTGCCATAGATTACCAGGAGAATACTGCTCCTCTGCATCTGCCCGTTGAATACGTGGCCATCGAGGGGCGTTTCAAACTTGATAGATTACAAGTCGCCGTCAACGACGTGGCCGAGGTTTTGAAGGCGTGTGTCGATAATGTTGAGGTCGATATGAAGCAACGGCCCAGCGCCAACGCTTTGAGGTTGGACATACAAATGCAAAGCTTTAGTGTGACCGGTGTTCAACAAGACGAGTTTCTTCCGAAACTAGTAACATCGAAGGAAGTCACAAACGATGTCAATTTATTGAATGTCGTATTTGAAACTAATCCCTTGGATGGTGCTTGTGATCAACGAGTGAAAGTGTCCGCCAAGCCACTACAGATTGTTTACGATGCCCAAACTGTTATCGAAATAGTTAATGTGTTTAAACCACCCACCGAATCTACAGCTTTAACTACGTGA
Protein
MVFESIVVDVLNRFLGDYVENLNRSQLKFGIWGGDVVLENLVLKQNALEELNIPVQTVYGHLGKLVLKIPWKNLYGASVEATIERLFLIVNPSAEVKYDADKEEKMALSAKQAELRRVEEAKKKEAEKDQNKLDETFVEKLVTQIIKNVQLKITDIHIRYEDSITNPKTPFSFGITLHNLSVHTTDENWKKAVIQEAVTKIFKILDLEGLAIYWNPKTDLYSKCGPQEIKSKLEQEIATKSSKPSFYNYALGPINATAKLKLNPKPEGDTPKFSIPKVILDLHMEQLSVNLNKAQYQDMMLLADSMDRMSKGAPYRKYRPDLKSFRGHYKEWWHFAYNCILEEEVRRRRRNWKWSHMLAHRQLCKDYASAYQSKLINKGKISPEQQALVEKAEKHLDLLNLVVIRQRIELEVERLGKLQQEAKKSKGWFGGWWSGSSTKDDETTDGTAIMKQFEKAMTSEEKEKLFRAIDYQENTAPLHLPVEYVAIEGRFKLDRLQVAVNDVAEVLKACVDNVEVDMKQRPSANALRLDIQMQSFSVTGVQQDEFLPKLVTSKEVTNDVNLLNVVFETNPLDGACDQRVKVSAKPLQIVYDAQTVIEIVNVFKPPTESTALTT

Summary

Description
Plays a role in the survival of neurons by maintaining protein homeostasis in the central nervous system. May function as part of a lysosomal degradation pathway.
Cofactor
Zn(2+)
Similarity
Belongs to the peptidase M2 family.
Belongs to the VPS13 family.
Keywords
Complete proteome   Endosome   Membrane   Protein transport   Reference proteome   Transport  
Feature
chain  Angiotensin-converting enzyme
EC Number
3.4.-.-
EMBL
BABH01033962    BABH01033963    BABH01033964    BABH01033965    BABH01033966    BABH01033967    + More
KQ458665    KPJ05606.1    RSAL01000238    RVE43697.1    KQ461198    KPJ06050.1    NWSH01002177    PCG68959.1    NEVH01020861    PNF20916.1    KK852470    KDR23219.1    PYGN01001102    PSN37570.1    KQ971311    EEZ98831.2    GEZM01043725    JAV78881.1    GFDL01008441    JAV26604.1    AXCN02000957    GFDL01008393    JAV26652.1    APCN01002939    AXCM01006669    GEDC01020311    JAS16987.1    GDUN01001099    JAN94820.1    AJVK01000756    AJVK01000757    AJVK01000758    AJVK01000759    AJVK01000760    GALX01003208    JAB65258.1    LBMM01008239    KMQ89031.1    JXUM01007029    JXUM01007030    KQ560229    KXJ83724.1    ADMH02002077    ETN59516.1    GFXV01003995    MBW15800.1    GGFL01005306    MBW69484.1    GFXV01003333    MBW15138.1    GAKP01022491    JAC36461.1    GDHF01030653    JAI21661.1    GDHF01032284    GDHF01032031    GDHF01022201    GDHF01021484    JAI20030.1    JAI20283.1    JAI30113.1    JAI30830.1    ABLF02021408    ABLF02021409    GAMC01020799    GAMC01020798    GAMC01020797    GAMC01020796    JAB85757.1    GFDF01003625    JAV10459.1    GL434335    EFN74999.1    NNAY01000686    OXU26973.1    GBXI01013984    JAD00308.1    KQ435911    KOX68931.1    KQ769179    OAD52957.1    KQ414616    KOC68416.1    CH902619    EDV36898.1    KPU76493.1    KPU76494.1    CVRI01000059    CRL03731.1    GBGD01000007    JAC88882.1    GFTR01008996    JAW07430.1    KZ288226    PBC31869.1    CH954177    EDV59664.2    KQ434960    KZC12683.1    JH431845    KQ977171    KYN05179.1    GEBQ01018189    JAT21788.1    GEBQ01024054    JAT15923.1    CH963719    EDW71988.1    UFQS01001985    UFQT01001985    SSX12864.1    SSX32306.1    QOIP01000007    RLU20668.1    LJIG01001609    KRT85331.1    GECZ01023287    JAS46482.1    GECZ01024835    JAS44934.1    ADTU01020182    ADTU01020183    KQ981561    KYN39826.1    KQ978684    KYN29306.1    CM002911    KMY92020.1    KMY92021.1    AE013599    GL445515    EFN89493.1    CM000157    EDW89206.2    KRJ98276.1    OUUW01000001    SPP75723.1    SPP75722.1    GECU01031474    JAS76232.1    KQ976604    KYM79405.1    CH940648    EDW61527.1    CM000071    EAL25969.3    JRES01001012    KNC26144.1    CH916367    EDW02215.1    KK107238    EZA54619.1    ACPB03002125    ACPB03002126    CP012524    ALC42034.1    KA644701    AFP59330.1    AJWK01023508    AJWK01023509    AAGJ04008378    AAGJ04008379    AAGJ04008380    CH933808    EDW09162.2    JYDR01000139    KRY67388.1    JYDO01000096    KRZ71455.1   
Pfam
PF12624   Chorein_N        + More
PF06650   SHR-BD
PF16909   VPS13_C
PF16910   VPS13_mid_rpt
PF16908   VPS13
PF09333   ATG_C
PF01027   Bax1-I
PF01401   Peptidase_M2
Interpro
IPR031645   VPS13_C        + More
IPR031642   VPS13_mid_rpt       
IPR031646   VPS13_N2       
IPR026854   VPS13_N       
IPR009543   SHR-BD       
IPR026847   VPS13       
IPR015412   Autophagy-rel_C       
IPR006214   Bax_inhibitor_1-related       
IPR001548   Peptidase_M2       
PDB
6CBC     E-value=1.86364e-44,     Score=453

Ontologies

Topology

Subcellular location
Late endosome membrane  
Length:
614
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00016
Exp number, first 60 AAs:
0.0001
Total prob of N-in:
0.00023
outside
1  -  614
 
 

Population Genetic Test Statistics

Pi
255.960942
Theta
185.517674
Tajima's D
1.321189
CLR
0
CSRT
0.741662916854157
Interpretation
Uncertain
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