SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04997
Pre Gene Modal
BGIBMGA008091
Annotation
PREDICTED:_uncharacterized_protein_LOC101736398_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.999
 

Sequence

CDS
ATGGCGAAAAAGCAGCGCGTACTATTTGGGATTCTCTGTTTGTTAAGTGCGGTCACCGCAGCGCCTAGTGATATTAGCAAAACAGACGATGTCCTACAAGCTGATAAAACTGAAACAATTGAACTTAATATAGAAGCAAGCGACGGAAACTTGTCTCAAGGCTCAAAACGTCAAAAACGATTTTATAACTATTACGGTTATGGCTTTCCACCGATCAGTCCCGTGATTTATTCTGATTCGCCCAGAGGCTATTCTTCCGGATTAGGGCCTAATGTAAATGAAGATCCTTTAGTAGAGATACACAAACGTCTTAAAGAAATAGTGGACGTTGTAAAGCAACCGGCACCACCACCTTCAACGCCTTTCCCGTTCCTTTTCCCCGTGATATTTGTTCCACAATATGACTGCAATTGTTTTCATAGTAGTGCCATAAATCCACCTACTGAACCAACAGCGAAGAAGAACGAAACACTACCTAGTGTGGAGAACAGAGTGCCAGTACTACTAGATGACGAAAGGCAAAATTGGGGTTTAGTTGTAAATGAAAGTGAAAACGATGATTATGAAGACGACTTAACTAACAGACCTATATCTTTTGACCCCATAAAGGCCGGGAGGCCAATGGCGCGTCCACCACCACCAGTTGAACATGGTAGTAAACAAAGTGAAACTGGAAACTTATTTACAACGACAACAACAACAACAACTGCCGCACCAGCAGTTGTTACGAGTCTGGAAACTTTTGGATTCCAGTCGCAGATACCAAAAGCTCCCAGTATTTGCGAGAAAGCGGTGACCGGTCTTTGTGGCGAGGCTTGGGAGAGGCCTATGTCCAACAGTGGATGTCTGTGGGAAGAGGAAGAATTTATATGCATTTTGGTGCTCTACAATATACAACTTTGTCTTGTCTATAGGATGACAAAAACAAACTTCGTTTTAGTTGTGGTCGCCGTCACGCTCGTTTGTATTGCTGCAGCGCCAAGTGATTTCGGAAAAGGCGACCTTGAGAAGAGTGTTGATCAAATCAGCCAACAAGAGCATCTCTCAAATAGTCAGAAAGAAGATGAAACTAACGTTCGCCGTAAACGTCACCAAAATTTTTACGATTACGCGGCGATAAGTCGATTCCAGTATTCCAACGTGCCCAATGGATTCGAAAATTCCAATTTCTTCAATATACTTTTTTCACAAATACAAAAACAATTTGATCAAATATCCTATTTTATAAGACCTTCTTCTGCATATTCACCAAATCCTCTGCCAATATTTGTTCCATCGTTTTATATCCCAAATAGTAACTGCAATTGCTATCCAACGAATGTTCAAGCTACTTTTGACAATAGCCAAAGTCAAATAATCCAAGATTTACCTCCAACTAACACAGATTATACAAGTGCAGATGTATCAATACCCGTTACTAGAACAGACATTAGACAACCGACCGCAACTTCAACAGCTAAAGAACTTTCAACCACAGCAGTGTCCATTATCGACGACAAAGTACGAACTTCAGCACCGATAATGACTGAAGAATCATCAACCGTTTCTACATCAACTACAAATTCTGAAGACACAGTTAGTATTAATTTCGGCGAAAACGAAAGTGATGATGATTATGAAGAGCTTGGTACTAGACCCATATCCTTCGAACCGATAAGAATAAATAATCAAAACGCTAGACCTGCACCACCAGTGGATCGTGGAAGCACACAAGAAGATTCTCAAAATTTAGACAGTTAA
Protein
MAKKQRVLFGILCLLSAVTAAPSDISKTDDVLQADKTETIELNIEASDGNLSQGSKRQKRFYNYYGYGFPPISPVIYSDSPRGYSSGLGPNVNEDPLVEIHKRLKEIVDVVKQPAPPPSTPFPFLFPVIFVPQYDCNCFHSSAINPPTEPTAKKNETLPSVENRVPVLLDDERQNWGLVVNESENDDYEDDLTNRPISFDPIKAGRPMARPPPPVEHGSKQSETGNLFTTTTTTTTAAPAVVTSLETFGFQSQIPKAPSICEKAVTGLCGEAWERPMSNSGCLWEEEEFICILVLYNIQLCLVYRMTKTNFVLVVVAVTLVCIAAAPSDFGKGDLEKSVDQISQQEHLSNSQKEDETNVRRKRHQNFYDYAAISRFQYSNVPNGFENSNFFNILFSQIQKQFDQISYFIRPSSAYSPNPLPIFVPSFYIPNSNCNCYPTNVQATFDNSQSQIIQDLPPTNTDYTSADVSIPVTRTDIRQPTATSTAKELSTTAVSIIDDKVRTSAPIMTEESSTVSTSTTNSEDTVSINFGENESDDDYEELGTRPISFEPIRINNQNARPAPPVDRGSTQEDSQNLDS

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.996918
 
 
Length:
579
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
14.89607
Exp number, first 60 AAs:
3.90381
Total prob of N-in:
0.64596
outside
1  -  579
 
 

Population Genetic Test Statistics

Pi
308.976577
Theta
223.642218
Tajima's D
1.587831
CLR
0
CSRT
0.800609969501525
Interpretation
Uncertain
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