Gene

KWMTBOMO04992  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008095

Annotation

short-chain_dehydrogenease/reductase-like_[Bombyx_mori]

Location

Bomo_Chr9(-):4918248-4921455      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.834

CDS

ATGTTCGCTAATAAAGTTGTAATCATCACGGGAGCAAGTTCAGGAATAGGCGCTGAAACTGCATATGAATTCGCCAAATTGAATGCGAAATTGGTTTTAACTGGGAGAAAAAAGGAAAATCTTGATAATGTTGCATCCGATTGTGAAAGTCAATCTCCCAGTAAAATAAAACCGTTGGTAGTCGTGGCTGATATGAATAATGAGAGCGATGTCGAGAATATAATAAAAAAAACTGTTGATAACTATCACCAATTGGATGTGCTTGTAAATAATGCTGGTGTTTTGGAATCTGGTACCATAGAAACAACATCTTTGGCTCAATACGATAGAATAATGAACACTAATGTTCGCGGACCTTATTATTTGACGATGTTGGCAATTCCGCATTTGATTAAAACTAAAGGAAACATTGTCAACGTTTCCAGTGTTACTGGTTTGAGATCTTTCCCTAATGTCCTAGCGTATTGCATTTCTAAATCGGCAATAGATCAGTTTACAAGATGTGTGGCTTTAGAAGTAGCATTGAAAGGAGTTCGCGTGAATGCCGTCAACCCTGGGGTAATTACTACTGGTTTACATAAAAAAGGCGAAGGAAGTATGAACGAAGAACAATATGAAGCTTTTTTGGCAAAATGCGCAGAAACCCACGCTCTCGGCAGACCTGGGGATGCCAAAGAAGTATCTTCAGTCATCGTTTTCTTAGCTAGTGATGCTGCAAGCAACATTACTGGTGCCACTTTGCCTGTAGATGGAGGTCGTCATGCCATGTGTCCTAGATAA

Protein

MFANKVVIITGASSGIGAETAYEFAKLNAKLVLTGRKKENLDNVASDCESQSPSKIKPLVVVADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRIMNTNVRGPYYLTMLAIPHLIKTKGNIVNVSSVTGLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVITTGLHKKGEGSMNEEQYEAFLAKCAETHALGRPGDAKEVSSVIVFLASDAASNITGATLPVDGGRHAMCPR

Uniprot

H9JEZ8   Q2F651   A0A2H1WLI7   A0A0N1IEC4   A0A194QKD5   S4PS88   + More
A0A2A4K3H7   A0A0L7KQD7   A0A212FE39   A0A2A4K3W4   H9JEZ9   A0A2H1WLM5   A0A194PR52   A0A194RFH9   S4PX81   S4P403   D6WBF1   H9IVP2   I4DNP9   Q2F652   A0A023ENP4   A0A182HAP4   J9HY30   A0A212F8M7   A0A2H1V849   A0A182LEW9   A0A2A4JMG8   A0A1W4XV70   A0A182XHV8   Q7PR84   A0A182HSU0   A0A182VPA1   A0A182TD91   B0X0M4   J3JT59   A0A2W1BPM7   U5EYA8   A0A1Q3FCK0   A0A182K3V2   A0A1S3IQP8   A0A182P965   A0A1I8PG95   E0VS61   A0A1L8EBS5   A0A1L8EDH6   A0A1L8EDA7   A0A182RS31   A0A1S3IQ98   A0A0M9A8J7   A0A2P8Y4R7   A0A1L8EDJ7   A0A2H8TRX4   A0A182TTS6   A0A1W7R596   A0A1J1IX96   A0A182V2E6   Q7QCA0   J9K4P0   R4FQ30   A0A1B6GU46   A0A2C9GR56   A0A026VV03   A0A1B6D562   A0A1B6JEH2   A0A1I8N405   A0A182M8T5   A0A0L0CQ82   A0A182SS86   A0A182LEW0   B4QWZ5   B4I447   A0A0L7KPW7   Q8IPP8   C4WUE4   A0A0J7KFU3   A0A1Y1LAV0   A0A1J1IYY0   W5J801   A0A023F8F0   A0A069DY41   Q8IGG7   A0A182Q2B3   A0A182IKA3   A0A084VXX9   A0A1L8EAQ3   B4PUV7   A0A2M4AJE9   A0A2M4AJQ0   A0A2M3Z8L5   Q170J0   A0A067R623   A0A2S2QKP0   T1DQK7   A0A0L7R3L7   A0A1S3D915   B4NKA4   A0A2M4BXH3   A0A2M4BY41   B3P2H5   A0A182FRI9  

Pubmed

19121390    26354079    23622113    26227816    22118469    18362917    + More
19820115    22651552    24945155    26483478    17510324    20966253    12364791    14747013    17210077    22516182    23537049    28756777    20566863    29403074    24508170    30249741    25315136    26108605    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    28004739    20920257    23761445    25474469    26334808    24438588    17550304    17519023    24845553   

EMBL

BABH01033917    DQ311221    ABD36166.1    ODYU01009467    SOQ53929.1    KQ458665    + More
KPJ05623.1    KQ461198    KPJ06033.1    GAIX01000150    JAA92410.1    NWSH01000203    PCG78454.1    JTDY01007021    KOB65518.1    AGBW02008979    OWR51994.1    PCG78453.1    SOQ53928.1    KQ459595    KPI95931.1    KQ460313    KPJ16055.1    GAIX01005498    JAA87062.1    GAIX01006214    JAA86346.1    KQ971312    EEZ97890.1    BABH01039662    AK403072    BAM19539.1    DQ311220    ABD36165.1    GAPW01003549    JAC10049.1    JXUM01081382    JXUM01123063    KQ566675    KQ563243    KXJ69914.1    KXJ74217.1    CH477221    EJY57385.1    AGBW02009702    OWR50087.1    ODYU01001173    SOQ37020.1    NWSH01000983    PCG73247.1    AAAB01008859    EAA07681.6    APCN01000350    DS232242    EDS38266.1    BT126415    KB632402    AEE61379.1    ERL94969.1    KZ149964    PZC76241.1    GANO01000477    JAB59394.1    GFDL01009740    JAV25305.1    DS235745    EEB16217.1    GFDG01002611    JAV16188.1    GFDG01002077    JAV16722.1    GFDG01002078    JAV16721.1    KQ435726    KOX78123.1    PYGN01000933    PSN39247.1    GFDG01002075    JAV16724.1    GFXV01005148    MBW16953.1    GEHC01001354    JAV46291.1    CVRI01000063    CRL04899.1    EAA07469.4    EGK96869.1    ABLF02005808    ACPB03001903    GAHY01000619    JAA76891.1    GECZ01003828    JAS65941.1    KK107871    QOIP01000007    EZA47366.1    RLU20203.1    GEDC01016505    JAS20793.1    GECU01010179    JAS97527.1    AXCM01010093    JRES01000061    KNC34518.1    CM000364    EDX11757.1    CH480821    EDW54990.1    JTDY01007683    KOB65019.1    AE014297    AAN13253.1    AK341030    BAH71514.1    LBMM01007925    KMQ89303.1    GEZM01064587    JAV68706.1    CRL04898.1    ADMH02002105    ETN58985.1    GBBI01001127    GEMB01003820    JAC17585.1    JAR99434.1    GBGD01002600    JAC86289.1    BT001792    AAN71547.1    AXCN02000007    ATLV01018212    KE525224    KFB42823.1    GFDG01002982    JAV15817.1    CM000160    EDW97764.1    GGFK01007592    MBW40913.1    GGFK01007692    MBW41013.1    GGFM01004116    MBW24867.1    EF173379    CH477473    ABM68625.1    EAT40351.1    KK852678    KDR18660.1    GGMS01008897    MBY78100.1    GAMD01001105    JAB00486.1    KQ414663    KOC65477.1    CH964272    EDW84034.1    GGFJ01008571    MBW57712.1    GGFJ01008517    MBW57658.1    CH954181    EDV47925.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000037510    UP000007151    + More
UP000007266    UP000069940    UP000249989    UP000008820    UP000075882    UP000192223    UP000076407    UP000007062    UP000075840    UP000075903    UP000075902    UP000002320    UP000030742    UP000075881    UP000085678    UP000075885    UP000095300    UP000009046    UP000075900    UP000053105    UP000245037    UP000183832    UP000007819    UP000015103    UP000053097    UP000279307    UP000095301    UP000075883    UP000037069    UP000075901    UP000000304    UP000001292    UP000000803    UP000036403    UP000000673    UP000075886    UP000075880    UP000030765    UP000002282    UP000027135    UP000053825    UP000079169    UP000007798    UP000008711    UP000069272   

PRIDE

H9JEZ8    Q2F651    H9JEZ9    H9IVP2    Q2F652    Q8IPP8    + More
Q8IGG7   

Pfam

PF00106   adh_short

Interpro

IPR036291   NAD(P)-bd_dom_sf        + More
IPR002347   SDR_fam       
IPR020904   Sc_DH/Rdtase_CS       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9JEZ8   Q2F651   A0A2H1WLI7   A0A0N1IEC4   A0A194QKD5   S4PS88   + More
A0A2A4K3H7   A0A0L7KQD7   A0A212FE39   A0A2A4K3W4   H9JEZ9   A0A2H1WLM5   A0A194PR52   A0A194RFH9   S4PX81   S4P403   D6WBF1   H9IVP2   I4DNP9   Q2F652   A0A023ENP4   A0A182HAP4   J9HY30   A0A212F8M7   A0A2H1V849   A0A182LEW9   A0A2A4JMG8   A0A1W4XV70   A0A182XHV8   Q7PR84   A0A182HSU0   A0A182VPA1   A0A182TD91   B0X0M4   J3JT59   A0A2W1BPM7   U5EYA8   A0A1Q3FCK0   A0A182K3V2   A0A1S3IQP8   A0A182P965   A0A1I8PG95   E0VS61   A0A1L8EBS5   A0A1L8EDH6   A0A1L8EDA7   A0A182RS31   A0A1S3IQ98   A0A0M9A8J7   A0A2P8Y4R7   A0A1L8EDJ7   A0A2H8TRX4   A0A182TTS6   A0A1W7R596   A0A1J1IX96   A0A182V2E6   Q7QCA0   J9K4P0   R4FQ30   A0A1B6GU46   A0A2C9GR56   A0A026VV03   A0A1B6D562   A0A1B6JEH2   A0A1I8N405   A0A182M8T5   A0A0L0CQ82   A0A182SS86   A0A182LEW0   B4QWZ5   B4I447   A0A0L7KPW7   Q8IPP8   C4WUE4   A0A0J7KFU3   A0A1Y1LAV0   A0A1J1IYY0   W5J801   A0A023F8F0   A0A069DY41   Q8IGG7   A0A182Q2B3   A0A182IKA3   A0A084VXX9   A0A1L8EAQ3   B4PUV7   A0A2M4AJE9   A0A2M4AJQ0   A0A2M3Z8L5   Q170J0   A0A067R623   A0A2S2QKP0   T1DQK7   A0A0L7R3L7   A0A1S3D915   B4NKA4   A0A2M4BXH3   A0A2M4BY41   B3P2H5   A0A182FRI9  

PDB

1SPX     E-value=1.2394e-37,     Score=390

KEGG

692845    no KO assigned | (RefSeq) short-chain dehydrogenease/reductase 2

GO

GO:0016491   GO:0016021   GO:0004316   GO:0102132   GO:0102131   GO:0047045   GO:0004303   GO:0004523   GO:0004743   GO:0006096   GO:0030955   GO:0008026   GO:0003677   GO:0005515   GO:0016742   GO:0003824  

Length:

259

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.21494

Exp number, first 60 AAs:

0.1125

Total prob of N-in:

0.07694

outside

1  -  259

 

 

Pi

27.002811

Theta

24.125414

Tajima's D

0.307129

CLR

296.109837

CSRT

0.467776611169442

Interpretation

Uncertain