Gene

KWMTBOMO04975  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004638

Annotation

PREDICTED:_PCI_domain-containing_protein_2_homolog_[Amyelois_transitella]

Location

Bomo_Chr9(-):3917868-3920229      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.395 PlasmaMembrane   Reliability : 1.125

CDS

ATGTCGATGATAACTGGCACTCTTAATCAATACATACAATGTGTGGAACGTATGTACAGAACGGGACAAGGTAACATATTGTCTAGACTGTTGTCTCTAAGAGATGAACATGTCTACAATAGGAATCTATTATCTAGCGATATTGCAACCCTTGTCACAGGAAATTGTGTTGCTCCATTAGATGAACTTGTAATTGCACACTTATCATGTCTTAAGGCATTATATGCAAGTGATTACATTGAGGCATACGATCATCAGAGTATATGTGTGGCCTCTGTCGTAAAGCTATTACAGGGACAGAAAGAAGAGAACTGGTGCCTTCCGGTTATGTATGCTGCATGTTTAGATCTTAGACTTGTTGCACAGAAAGCAGAGGCATCTAGCCCTCAAAATGGCAGTAAAATTATGGAAAAAGCAGCAGAGAGCTTATTAGCTTGCTTCAGAGTCTGTGCTGCTGACAACAGAGCTTCAGATGTGGATACCAAAAAGATAGGCATGTTGTGTCTTGTAAACCAACTTCTTAAAGTATATTTCAGGATAAACAAGCTCCACCTTTGCAAACCATTGATTAGAGCCATTGATTCTTCACCATTCAAAGATCAATTCCCACTGGCCCAACAAATTACATACAGATATTTTGTGGGTCGTAAAGCCATGTTTGACTCAGACTATCGTCTAGCTGATGAATACTTATCGTTTGCTTTTGAAAATTGTCACAGAAGAAGCATACGAAATAAAAGGCTCATTCTAACTTATTTAGTTCCTGTGAAAATGCTGTTGGGTTTCATGCCCGCAAAATATTTACTAGAGAAATATGATTTGCTACAATTCTGGGATCTAATATCAGCTGTGAAAAATGGAGATTTGCGTGGTATCGATATGGTTATGGAGGAACATGAAAAGTTCTTCATAACGGCTGGTATTTATTTGATTGTAGAAAAATTAAAGATTACAGCATACAGAAATTTGTTTAGGAAAGTATATTTAGCGGAGAATTCACATCAGATAGACATAGCCAGCTTCGAGGCAGCATTACAAATCATGGGACAGGAAGATGTTGATTCAGATGAAACTCAATGTATTGTTGCAAATCTCATATATGATGGAAAAATCAAAGGATACATCTCATACCAACACAAGAAAGTGGTTGTCAGTAAACAAAATGCTTTTCCTCCATTATCTAGTCTGTATTAA

Protein

MSMITGTLNQYIQCVERMYRTGQGNILSRLLSLRDEHVYNRNLLSSDIATLVTGNCVAPLDELVIAHLSCLKALYASDYIEAYDHQSICVASVVKLLQGQKEENWCLPVMYAACLDLRLVAQKAEASSPQNGSKIMEKAAESLLACFRVCAADNRASDVDTKKIGMLCLVNQLLKVYFRINKLHLCKPLIRAIDSSPFKDQFPLAQQITYRYFVGRKAMFDSDYRLADEYLSFAFENCHRRSIRNKRLILTYLVPVKMLLGFMPAKYLLEKYDLLQFWDLISAVKNGDLRGIDMVMEEHEKFFITAGIYLIVEKLKITAYRNLFRKVYLAENSHQIDIASFEAALQIMGQEDVDSDETQCIVANLIYDGKIKGYISYQHKKVVVSKQNAFPPLSSLY

Similarity

Belongs to the glycosyl hydrolase 31 family.

Uniprot

H9J548   A0A2A4IZ55   A0A2H1V6H7   A0A194QKU8   A0A0N1I9T7   A0A194PJL7   + More
S4PFW4   A0A0L7KLZ2   A0A212EZE4   A0A1Y1M616   D6W8Q3   A0A1I8P4L9   A0A0A1WU77   J3JZF7   A0A1I8MXP9   N6UGD1   A0A0K8VUB0   A0A0K8UCB4   W8BTG4   A0A1B0DB00   A0A158NSN4   A0A0C9RWM4   A0A182Y5K4   A0A182SJ00   E9IN43   E1ZWN0   A0A182RRJ0   A0A084VL66   A0A023ETI1   A0A182LYW4   Q17PT6   A0A1B0A8G9   A0A182GIU9   A0A182WHI1   D3TRC3   A0A182QW49   A0A182NUW3   A0A195DV34   A0A310SCI1   A0A087ZZE8   F4W8A7   A0A182VHI1   A0A182UEL3   A0A182L057   A0A182X164   Q7PN34   A0A182IBW4   A0A182JNG7   A0A182P3B7   A0A154PK63   A0A1A9V0K1   A0A1A9WME3   B0WQB9   A0A2A3EIQ9   A0A1Q3F105   A0A195EXI4   A0A067RAE4   A0A1L8DWZ2   A0A182J3W3   A0A0L7QNE6   A0A0C9RZA4   A0A0K8TTQ2   A0A3L8D7D1   A0A0C9QKR2   A0A0N1ITW1   A0A2J7R483   A0A336M2B0   E2C5T6   A0A182G8N5   A0A195CBA4   A0A232FJ11   K7J5V0   W5JT38   A0A1J1IEU1   A0A182F5N6   A0A151WK44   A0A1S3HRB6   Q2LZ67   B4HAI6   B4KUR1   A0A3B0J8Z0   A0A0P5JE07   B4LCP6   E9G3U4   A0A210QK28   B4J2J7   I3JR08   W5MUC5   A0A1W4VUB3   A0A1S3K4G3   A0A3B4TC50   A0A1A9W975   A0A3P8VKT0   A0A1U7R4S4   A0A131Y3L1   H3A2V9   A0A2M4BSF7   A0A0S7I035   A0A0B7AXG0   F1QPP5  

Pubmed

19121390    26354079    23622113    26227816    22118469    28004739    + More
18362917    19820115    25830018    22516182    25315136    23537049    24495485    21347285    25244985    21282665    20798317    24438588    24945155    17510324    26483478    20353571    21719571    20966253    12364791    14747013    17210077    24845553    26369729    30249741    28648823    20075255    20920257    23761445    15632085    17994087    21292972    28812685    25186727    24487278    9215903    23594743   

EMBL

BABH01042340    NWSH01005157    PCG64393.1    ODYU01000922    SOQ36417.1    KQ461198    + More
KPJ06019.1    KQ459363    KPJ01261.1    KQ459606    KPI91280.1    GAIX01003862    JAA88698.1    JTDY01008904    KOB64327.1    AGBW02011292    OWR46875.1    GEZM01042222    JAV80040.1    KQ971312    EEZ98385.1    GBXI01012106    JAD02186.1    BT128639    AEE63596.1    APGK01027347    KB740659    KB632391    ENN79696.1    ERL94542.1    GDHF01024459    GDHF01022484    GDHF01012145    GDHF01010174    JAI27855.1    JAI29830.1    JAI40169.1    JAI42140.1    GDHF01028012    JAI24302.1    GAMC01001905    JAC04651.1    AJVK01000560    AJVK01000561    ADTU01025073    GBYB01013440    JAG83207.1    GL764272    EFZ18030.1    GL434862    EFN74410.1    ATLV01014417    KE524970    KFB38710.1    GAPW01001894    JAC11704.1    AXCM01007254    CH477189    EAT48753.1    JXUM01066659    KQ562409    KXJ75976.1    EZ423975    ADD20251.1    AXCN02000748    KQ980322    KYN16607.1    KQ779356    OAD51983.1    GL887898    EGI69602.1    AAAB01008964    EAA12851.4    APCN01000751    KQ434924    KZC11610.1    DS232038    EDS32786.1    KZ288230    PBC31607.1    GFDL01013836    JAV21209.1    KQ981948    KYN32612.1    KK852820    KDR15564.1    GFDF01003126    JAV10958.1    KQ414855    KOC60138.1    GBYB01013441    GBYB01013442    JAG83208.1    JAG83209.1    GDAI01000278    JAI17325.1    QOIP01000011    RLU16395.1    GBYB01004139    JAG73906.1    KQ435732    KOX77351.1    NEVH01007815    PNF35626.1    UFQS01000445    UFQT01000445    SSX04009.1    SSX24374.1    GL452812    EFN76694.1    JXUM01047875    JXUM01047876    KQ561537    KXJ78227.1    KQ978023    KYM97980.1    NNAY01000133    OXU30665.1    ADMH02000447    ETN66443.1    CVRI01000048    CRK98791.1    KQ983017    KYQ48228.1    CH379069    EAL29642.2    CH479240    EDW37584.1    CH933809    EDW19317.1    OUUW01000002    SPP76783.1    GDIQ01250799    GDIQ01250798    GDIQ01209413    GDIQ01209367    GDIQ01203669    GDIQ01203668    GDIQ01162176    GDIQ01133093    GDIQ01054517    LRGB01000446    JAK48056.1    KZS19096.1    CH940647    EDW70938.1    GL732531    EFX85927.1    NEDP02003256    OWF49104.1    CH916366    EDV97082.1    AERX01047497    AHAT01003524    GEFM01002698    JAP73098.1    AFYH01090254    AFYH01090255    AFYH01090256    AFYH01090257    GGFJ01006782    MBW55923.1    GBYX01435980    JAO45355.1    HACG01038824    CEK85689.1    FP017167    FP085413   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000037510    UP000007151    + More
UP000007266    UP000095300    UP000095301    UP000019118    UP000030742    UP000092462    UP000005205    UP000076408    UP000075901    UP000000311    UP000075900    UP000030765    UP000075883    UP000008820    UP000092445    UP000069940    UP000249989    UP000075920    UP000075886    UP000075884    UP000078492    UP000005203    UP000007755    UP000075903    UP000075902    UP000075882    UP000076407    UP000007062    UP000075840    UP000075881    UP000075885    UP000076502    UP000078200    UP000091820    UP000002320    UP000242457    UP000078541    UP000027135    UP000075880    UP000053825    UP000279307    UP000053105    UP000235965    UP000008237    UP000078542    UP000215335    UP000002358    UP000000673    UP000183832    UP000069272    UP000075809    UP000085678    UP000001819    UP000008744    UP000009192    UP000268350    UP000076858    UP000008792    UP000000305    UP000242188    UP000001070    UP000005207    UP000018468    UP000192221    UP000261420    UP000265120    UP000189705    UP000008672    UP000000437   

PRIDE

H9J548   

Pfam

PF01399   PCI        + More
PF01055   Glyco_hydro_31

Interpro

IPR000717   PCI_dom        + More
IPR036388   WH-like_DNA-bd_sf       
IPR013780   Glyco_hydro_b       
IPR017853   Glycoside_hydrolase_SF       
IPR000322   Glyco_hydro_31       
IPR021184   TNF_CS       

SUPFAM

SSF51445   SSF51445       

Gene 3D

1.10.10.10     2.60.40.1180    

ProteinModelPortal

H9J548   A0A2A4IZ55   A0A2H1V6H7   A0A194QKU8   A0A0N1I9T7   A0A194PJL7   + More
S4PFW4   A0A0L7KLZ2   A0A212EZE4   A0A1Y1M616   D6W8Q3   A0A1I8P4L9   A0A0A1WU77   J3JZF7   A0A1I8MXP9   N6UGD1   A0A0K8VUB0   A0A0K8UCB4   W8BTG4   A0A1B0DB00   A0A158NSN4   A0A0C9RWM4   A0A182Y5K4   A0A182SJ00   E9IN43   E1ZWN0   A0A182RRJ0   A0A084VL66   A0A023ETI1   A0A182LYW4   Q17PT6   A0A1B0A8G9   A0A182GIU9   A0A182WHI1   D3TRC3   A0A182QW49   A0A182NUW3   A0A195DV34   A0A310SCI1   A0A087ZZE8   F4W8A7   A0A182VHI1   A0A182UEL3   A0A182L057   A0A182X164   Q7PN34   A0A182IBW4   A0A182JNG7   A0A182P3B7   A0A154PK63   A0A1A9V0K1   A0A1A9WME3   B0WQB9   A0A2A3EIQ9   A0A1Q3F105   A0A195EXI4   A0A067RAE4   A0A1L8DWZ2   A0A182J3W3   A0A0L7QNE6   A0A0C9RZA4   A0A0K8TTQ2   A0A3L8D7D1   A0A0C9QKR2   A0A0N1ITW1   A0A2J7R483   A0A336M2B0   E2C5T6   A0A182G8N5   A0A195CBA4   A0A232FJ11   K7J5V0   W5JT38   A0A1J1IEU1   A0A182F5N6   A0A151WK44   A0A1S3HRB6   Q2LZ67   B4HAI6   B4KUR1   A0A3B0J8Z0   A0A0P5JE07   B4LCP6   E9G3U4   A0A210QK28   B4J2J7   I3JR08   W5MUC5   A0A1W4VUB3   A0A1S3K4G3   A0A3B4TC50   A0A1A9W975   A0A3P8VKT0   A0A1U7R4S4   A0A131Y3L1   H3A2V9   A0A2M4BSF7   A0A0S7I035   A0A0B7AXG0   F1QPP5  

PDB

3T5X     E-value=1.68865e-65,     Score=633

KEGG

101737752    no KO assigned | (RefSeq) PCI domain-containing protein 2 homolog

GO

GO:0016973   GO:0003723   GO:0000973   GO:0070390   GO:0006368   GO:0003690   GO:0071033   GO:0005975   GO:0004553   GO:0005737   GO:0019904   GO:0005844   GO:0006406   GO:0005515   GO:0016818   GO:0003676   GO:0005524   GO:0006139   GO:0008026   GO:0003677   GO:0016742   GO:0003824  

Length:

397

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

11.11085

Exp number, first 60 AAs:

0.01917

Total prob of N-in:

0.37005

outside

1  -  397

 

 

Pi

205.399666

Theta

183.258046

Tajima's D

0.371875

CLR

0.770079

CSRT

0.478826058697065

Interpretation

Uncertain