SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04974
Annotation
PREDICTED:_uncharacterized_protein_LOC106142841_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 3.904
 

Sequence

CDS
ATGGCCGAATACGTATTCTGGACCGGAGACGAGCGCGGCGTGACCACCGCCATTGAGGTCTTCTTGCAGGAGGGAATGATGACGAAGGAAGAAGCTATATCTTTCTTAGAAGAAATCAAATTCAATTTGGACTATCTACGCGCGCACTACGCGCAGAACATGAAGGCTGCAGAGGAGAACGCTCACCAGGAGAAACTCAGGAACATGCTCCTAGAACAGGTCAAGGATTACCAGTACCGCGTTCCGGTGGTCCAGTCCTCGTTCGGAGGTAACCACGCGCGCGGCTGGGAGCTCGGCGCCGGCGCCCCCCTGGACCCCGTCAAACGCGCCTACGACCCGATGCTCCAGACCAACATTATCAGCACATCGGACTACGACCGCGACGGCCAGATCATCACCGATGAGGAGTACGAGGAGATGATGGACAAACTGAAGGCAGCCGATACTCTGTACACGGAATACACTCTCGAGGAAATCATCTACCAGCTCGCCAAGATGATGTTCTCGCAGTCTCTGTCCCGGGACCCCGCGTCGGCGCGCGCCGCAACGCAGCGCTTCATGGCGTTCCTGGAACTGGAGGCCGAGCGGGGACAGCTCTCCCGGACTATCGAGAAGAAAGTGCTCGATGTCATGATCGCTGCTTTGACGGACACGATCGGCGATCACCCGGAACTGCTGCAGGCGCACGATTCCATCGGAGTGAGCCCTGGGAACAGGTAG
Protein
MAEYVFWTGDERGVTTAIEVFLQEGMMTKEEAISFLEEIKFNLDYLRAHYAQNMKAAEENAHQEKLRNMLLEQVKDYQYRVPVVQSSFGGNHARGWELGAGAPLDPVKRAYDPMLQTNIISTSDYDRDGQIITDEEYEEMMDKLKAADTLYTEYTLEEIIYQLAKMMFSQSLSRDPASARAATQRFMAFLELEAERGQLSRTIEKKVLDVMIAALTDTIGDHPELLQAHDSIGVSPGNR

Summary

EMBL
RSAL01000248    RVE43532.1    KQ459606    KPI91281.1    ODYU01000922    SOQ36418.1    + More
KQ461198    KPJ06018.1    KQ971312    EEZ98230.2    NWSH01005157    PCG64394.1    KK853323    KDR08521.1    GEBQ01029925    JAT10052.1    NEVH01013579    PNF28468.1    GECU01024327    JAS83379.1    GECZ01007654    JAS62115.1    GEDC01017244    JAS20054.1    GANO01004281    JAB55590.1    CVRI01000040    CRK95109.1    GEHC01000424    JAV47221.1    AJVK01035632    UFQT01000111    SSX20211.1    LNIX01000004    OXA55468.1    JXUM01100579    JXUM01100580    KQ564581    KXJ72066.1    CH933806    KRG01085.1    EDW14578.1    KRG01086.1    CH940652    KRF78746.1    GAKP01010168    JAC48784.1    GL732584    EFX74242.1    EDW59193.1    KRF78745.1    AE014297    BT023409    AAN13558.1    AAY55825.1    CM000160    KRK03600.1    CH902617    EDV41677.1    CP012526    ALC46224.1    KPU79288.1    AGB95915.1    DS231855    EDS38251.1    ABJB010431126    ABJB010959597    ABJB011093335    DS746296    EEC07695.1    AAF54937.1    AAN13560.1    AAN13561.1    AAN13562.1    OUUW01000013    SPP87870.1    GDIP01116029    JAL87685.1    EDW97232.1    GDIP01195387    JAJ28015.1    CH954181    EDV49239.1    KRK03599.1    GDHF01005882    GDHF01005658    GDHF01004804    JAI46432.1    JAI46656.1    JAI47510.1    LRGB01000166    KZS20532.1    GDIP01103336    JAM00379.1    GDIQ01223709    JAK28016.1    GDIQ01229809    JAK21916.1    GDIQ01071013    JAN23724.1    CCAG010019923    CM000364    EDX13079.1    CH480815    EDW42325.1    GDIQ01220810    JAK30915.1    GDIQ01018242    JAN76495.1    CH916369    EDV92950.1    CM000070    EIM52535.2    GDIP01018212    JAM85503.1    CH479179    EDW25033.1    KRT00089.1    EAL27528.2    GFWV01003459    MAA28189.1    GAMC01019839    JAB86716.1    CH964272    KRF99956.1    JXJN01008591    GAMC01019840    JAB86715.1    GGMR01009044    MBY21663.1    EDW84060.1    KRF99957.1    ABLF02033717    ABLF02033723    ABLF02048128    ABLF02062613    KA646747    AFP61376.1    GDIQ01101550    JAL50176.1    JRES01001062    KNC25899.1    GDIP01044602    JAM59113.1    GDIQ01150384    JAL01342.1    GDIQ01132649    JAL19077.1    GDIQ01103199    JAL48527.1    GDIQ01229808    JAK21917.1   
Interpro
IPR016137   RGS       

Ontologies

Topology

Length:
239
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.000530000000000001
Exp number, first 60 AAs:
0.00033
Total prob of N-in:
0.04318
outside
1  -  239
 
 

Population Genetic Test Statistics

Pi
308.050754
Theta
185.798818
Tajima's D
-1.468008
CLR
17.412074
CSRT
0.0634968251587421
Interpretation
Uncertain
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