SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04969  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007986
Annotation
PREDICTED:_phosphatidylinositol_4-kinase_beta_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.115
 

Sequence

CDS
ATGTTGGAGGATGTTCCCGTGCACGGAAGTCGGTCAGACTCCCGCAATGGAAAGAGTACTATCCACCAGAGAAACCTCAGCTTGGATTTCAGGCATGTGACAGGCGCAGGAGGGCCGCCAGCGGGATGCGGTCATCAAAGGAACAGGTCCCTGGACTCTGTGCTCCAACGGATACCAGAAGACATGACACCAACTTCGCCGGAGGATGCACCTCTGCGACTCACTATCGAAGCGACGGTACCAAGATTGGCGCTACCCCCGGAAGTGCCGACAGGCTCAGACGACTCTGGTATTCACACGCCGCCCGATGACAACGAAGACGAGCGACCCCCGCTCCCGACAGCGGCGCGGTCTAGAGAAAGTCTTGATTCTGGAAATCCGGAAGACACAGAGAAACCTCCCGATCCCCCCGATACGATAGCAGAACCGACAACTACAGCTGGCACCAGCGTCGCAAGCACGTCCAAAAACAAAGACTCTCTGTTAAGACTATTCGAGAGTTCGTTGTTTGACATGAACATGGCAATAGAATATTTTCACAACTCCTCGGGCGTACAGACTTATCTGGCGAATAAGTTGTTTTCGTTTCCGCACGAGGATGTCGATTTTTATCTGCCGCAGCTGGCAACGATGTACATAGAGTTAGCCGACGTAGCGGAGGTGCTAAAGCCGTATTTGATTCATAGATGTAAACAGAGCACGGAGTTTTCGCTGCGACTCGTATGGTTGTTGACCGCGTTCGGTGGAGATTCGACAACGTCTAAAGCGATGAAGCTGAGAGAATCCATACTGGCCGAAAAGATTAGGCCGGCAGCGAAAAGAGGACATCACCGAACACAATCGGACGCTTCGGCGTTGAGAGTGTCGACGCCTCCTTGGAAATATTTAGGGGACTTGACATCTGGACGGGCCTTCGATAATGGTTGTGTTTGTGGGGAACAGTGTTCGTGCGACGCTCCCAGACTGGCACCGCATTTAGAGTTCATGTTGGCGCTAATGAATATCGGACGCCGGTTGGCCAGCGTCGCGGACAAGGAACGAAGGAATGGCCACCTCAGAGCTGAACTAGCGACTCTGAACCTGAATTTGCCGGCCAAAGTTTGGCTACCCCTATATCACAAGCCTCACTACGTGTTGAGGATATCACCGTACGCGGCCACGGTGCTCAATAGCAAAGATAAGGCTCCGTACATAATGTACGTGGAGGTACTAGAGACTGACGGGCACGAGCCTCTTCCTCCTCGCCAGCTGCCTCCAGCGCCACCAGCTCCCCACTCTCCCCCCATCAGACATACGAAGAGTGAGGAGAACCTCGTGCCTGAGTGGCCTGCGCTCTCCCTGTATTCGGCACTGGACGACGTGGACACCGGAGACTGCTGGAGTCATGACGACGATGAACTCAGCTCTCATTACGACCACAGAGCGCCCGCGCCCGACAGCGTGTCGCAGGTCTCGGCGGTTTCGGTTCTGTCCACGTCATCGTGCGGCAGCCGCGAGTCTGTGGCCGTGGTCGCCGGCGAGGTGCGCAGGAGGCTGGTCGACGCCACAGAAGCAGAAACCTTCAGACACGACCCCGCCGATCCGTCCGCTACCGCACTTAAGGAATCGTGGGAGAGCAAGCTGTGCCGCATCCGCGCCATGTCCCCGTACGGCGCGCTGTCGGGCTGGCGGCTGCTGGGCTGCATCGTGAAGGTGGGCGACGACCTGCGCCAGGAGCTGCTGGCCGCGCAGCTGCTGCGCCGCCTCACCGCCATCTGGCGCCACGAGCGCGTGCCGCTGGCGCTGCGCCCCTACGAGATCCTGTGTTTGGGCCGCGACACCGGACTCATACAACCGGTGCTGAACTCTGTGTCGCTGCACCAGATCAAGAAGCAGTCGGGGAAGTCCCTGCGCGCGTGGCTACAGCTAGAGCACGGCGCGCCCACCTCTGAAGGCTTCCTGCGCGCGCAAAGGAACTTCGTGGAATCCGTCGCCGCCTACGCGCTCGCCAGCTATCTGCTGCAACTCAAGGACCGGCACAACGGAAACATCTTATTGGACAGCGAAGGTCACATAATCCACATCGACTTCGGGTTCATATTCTCTACGTCACCGAAAAATCTTGGATTCGAAAGTTCACCGTTCAAATTGACACAGGAGTTCGTTGAGGTAATGGACGGCGAACACTCGGACATGTTTCAATACTTCAAGATATTGATCCTGCGCGGCCTCATCGCGGCGCGCAAGTACTGCGACCAGATCATACACATGGTCGAGCTGATGCGAATGAGCGGTCAGCTGGCGTGCCTCCGCAGTAGTAGCGTGGTGTCGTCGTTCCGCGCTCGCTTCCAGAGCGGCAAGACCGACCCGCAGCTGCAGGCGCTCGTCGACAGGCTCGTGCAGGACGCGCTCAACTCCATCTCCACCAGGCTCTACGACAACTACCAGTACCACACCAACGGGATACTGTGA
Protein
MLEDVPVHGSRSDSRNGKSTIHQRNLSLDFRHVTGAGGPPAGCGHQRNRSLDSVLQRIPEDMTPTSPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTPPDDNEDERPPLPTAARSRESLDSGNPEDTEKPPDPPDTIAEPTTTAGTSVASTSKNKDSLLRLFESSLFDMNMAIEYFHNSSGVQTYLANKLFSFPHEDVDFYLPQLATMYIELADVAEVLKPYLIHRCKQSTEFSLRLVWLLTAFGGDSTTSKAMKLRESILAEKIRPAAKRGHHRTQSDASALRVSTPPWKYLGDLTSGRAFDNGCVCGEQCSCDAPRLAPHLEFMLALMNIGRRLASVADKERRNGHLRAELATLNLNLPAKVWLPLYHKPHYVLRISPYAATVLNSKDKAPYIMYVEVLETDGHEPLPPRQLPPAPPAPHSPPIRHTKSEENLVPEWPALSLYSALDDVDTGDCWSHDDDELSSHYDHRAPAPDSVSQVSAVSVLSTSSCGSRESVAVVAGEVRRRLVDATEAETFRHDPADPSATALKESWESKLCRIRAMSPYGALSGWRLLGCIVKVGDDLRQELLAAQLLRRLTAIWRHERVPLALRPYEILCLGRDTGLIQPVLNSVSLHQIKKQSGKSLRAWLQLEHGAPTSEGFLRAQRNFVESVAAYALASYLLQLKDRHNGNILLDSEGHIIHIDFGFIFSTSPKNLGFESSPFKLTQEFVEVMDGEHSDMFQYFKILILRGLIAARKYCDQIIHMVELMRMSGQLACLRSSSVVSSFRARFQSGKTDPQLQALVDRLVQDALNSISTRLYDNYQYHTNGIL

Summary

Similarity
Belongs to the PI3/PI4-kinase family.
EMBL
KZ149974    PZC75976.1    ODYU01004324    SOQ44071.1    KQ461198    KPJ06014.1    + More
KQ459144    KPJ03703.1    AGBW02007748    OWR54617.1    GDHC01019365    GDHC01001507    JAP99263.1    JAQ17122.1    GBRD01015519    JAG50307.1    KQ971379    EEZ97712.1    GBHO01009229    GBHO01009228    JAG34375.1    JAG34376.1    GBBI01003207    JAC15505.1    GFTR01008213    JAW08213.1    GBGD01000627    JAC88262.1    PYGN01000904    PSN39507.1    KK853204    KDR09872.1    KK854317    PTY14584.1    JH430009    GDIQ01117474    JAL34252.1    GDIQ01117473    JAL34253.1    GDIQ01150354    JAL01372.1    GDIQ01215586    JAK36139.1    GDIQ01092430    JAL59296.1    LRGB01003134    KZS04083.1    GDIP01170966    JAJ52436.1    GDIP01150126    JAJ73276.1    GDIP01218269    JAJ05133.1    GDIQ01115923    JAL35803.1    GEZM01049748    JAV75881.1    GDIP01009821    JAM93894.1    GDIP01219562    JAJ03840.1    GDIP01123879    JAL79835.1    GDIP01063896    JAM39819.1    GDIP01145923    JAJ77479.1    GEZM01049747    JAV75882.1    GDIP01111380    JAL92334.1    GDIQ01005276    JAN89461.1    GDIQ01100835    JAL50891.1    GDIP01218270    JAJ05132.1    GL767674    EFZ13183.1    KQ977513    KYN02212.1    LBMM01000206    KMR04490.1    GL440704    EFN65504.1    GL732582    EFX74536.1    GFAC01005761    JAT93427.1    GEGO01001798    JAR93606.1    GEFM01005875    JAP69921.1    NCKU01005431    NCKU01001796    RWS04579.1    RWS11228.1    GANP01010490    JAB73978.1    GEDV01009831    JAP78726.1    GFPF01010545    MAA21691.1    GACK01007358    JAA57676.1    PZQS01000004    PVD32190.1    GDIP01089729    JAM13986.1    GFJQ02004597    JAW02373.1    GEFH01002124    JAP66457.1    LJIJ01000818    ODM94358.1    GGLE01006982    MBY11108.1    NEDP02002776    OWF50033.1    IAAA01011331    IAAA01011332    LAA04901.1    MWRG01000386    PRD36223.1    KQ420917    KOF78880.1    GDIQ01171546    JAK80179.1    KK117072    KFM69447.1    AAGJ04105879    AAGJ04105880    AAGJ04105881    AAGJ04105882    AAGJ04105883    LNIX01000019    OXA44482.1    KQ041575    KKF24722.1    GCES01006917    JAR79406.1    KB203188    ESO86106.1    GCES01042220    JAR44103.1    HADW01012539    SBP13939.1   
Pfam
PF00454   PI3_PI4_kinase
Interpro
IPR036940   PI3/4_kinase_cat_sf        + More
IPR018936   PI3/4_kinase_CS       
IPR000403   PI3/4_kinase_cat_dom       
IPR011009   Kinase-like_dom_sf       
IPR015433   PI_Kinase       
IPR001263   PI3K_accessory_dom       
IPR016024   ARM-type_fold       
SUPFAM
SSF56112   SSF56112        + More
SSF48371   SSF48371       
Gene 3D
PDB
5EUQ     E-value=3.14272e-71,     Score=685

Ontologies

Topology

Length:
816
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00759999999999999
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00007
outside
1  -  816
 
 

Population Genetic Test Statistics

Pi
26.690753
Theta
186.131277
Tajima's D
-1.747569
CLR
165.75897
CSRT
0.0343482825858707
Interpretation
Possibly Positive selection
Peptides ×
Source Sequence Identity Evalue
31250652 GVASMSNKSWALGGPLAGISPELAAVILGQW 100.00 3e-09
31250652 DTGLIQPLTQEFVEVMDGEHSDMFQYFK 95.45 1e-08
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