Gene

KWMTBOMO04954

Pre Gene Modal

BGIBMGA008080

Annotation

putative_zinc_finger_protein_nocA_[Danaus_plexippus]

Location

Bomo_Chr9(+):2652250-2653880      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.778

CDS

ATGGTGGTGCTTGAAGACGGTGGAATGATGGCTACAAATCCCAACCAGTACTTACAACCAGATTATTTAGCACCGCTTCCGTCCACTTTGGACTCGAAAAAAAGCCCGCTTGCGCTTCTAGCGCAAACCTGCAGCCAAATTGGTGTTGACTCGACACCTTCAAAGCCGCTGCTCCCACCACACGACAAGAAGAAAGTGAACAGTGTTAATAACAGTGATATAATAAGTCGTTCGTCACCAAACAGTAATACAATGAAACAAGACAAGCCGCGATCGTCTCCGGAAAGCAAACATTTGGCGTTCAAGCCATACGAGGCAAACGTTATAACAAAAAAACCGGATGAGACTCGGCCTTCTTCCAAAGCTAGTTCGGACAGTTCCGAAGACAAGAAATCTGGAAAGAGCACCCCGGGACGTAAATCAACATCGCCCAGTGGTGAAAATGGAAAAAACAGTCCTTCAAATGAAACAAAATCTTCTTCAGCCAGTTCATCTGGAACAAGCCCTATAATCCGCTCCGGATTAGAGGTTTTGGGACACGGCAAGGATCATCTGGGCGCTTTCAAGAATATACCTGGATTACCAGGATTTAATCCACTCTCTGGACTTTGTTGCCCGCCTGGATTGGAGCAGCACGGAAACCCGGCATTCAGACCGCCGTATGCCGGAGCACCATTCAATGCTCATCATGCCGCTATGCTTGCCGCCGCAGCTGCTTTTCCCGGATCTTCAGCAAACCCATACCTTGGATATGCGAGAGTTAAAACACCTGCCGGGGGAGAGACGTTGGTCCCTGTCTGCAAAGATCCATATTGCACAGGCTGTCAGTTCTCAGTCAACAACCATCATCTGTTAATGAGCAATGGATCTTGCCCCGCCGGGTGCACACAATGCGAACATCAAAAGTACAACTTAGCAATGGCAATGGCTCTGTCACAGCAAGGAGCCGCCGCTAGTAGTTTGCCGTACCACCAGCTGAGCCGACCCTACGTTTGCAACTGGATCGTCGGCGAATCTTACTGCGGCAAGCGGTTTGGAAATTCCGAGGAATTGTTACAGCACTTGAGAAGCCACACAGCCGACGGATCCGCTCCATCGACCAGTGCATCGACTCAAGCGTCCATTTTAAATCAATTTAATCCACTGTTCACGACTGCCGGTCTTCGTAGCGCATACCCGACGGCGCCGCTCAGCCCACTTTCTGCGAGTAGATACCATCCTTACTCAAAAGCTGGTCTCCCGGCCAGCCTCAGTGCTTCACCATACGGTGCCTTCAACCCTGCGCTCGGACCGTTTTATTCTCCCTACGCCATGTATGGACAGAGACTTGGGGCGGCAGCCGTTCACCAGTAA

Protein

MVVLEDGGMMATNPNQYLQPDYLAPLPSTLDSKKSPLALLAQTCSQIGVDSTPSKPLLPPHDKKKVNSVNNSDIISRSSPNSNTMKQDKPRSSPESKHLAFKPYEANVITKKPDETRPSSKASSDSSEDKKSGKSTPGRKSTSPSGENGKNSPSNETKSSSASSSGTSPIIRSGLEVLGHGKDHLGAFKNIPGLPGFNPLSGLCCPPGLEQHGNPAFRPPYAGAPFNAHHAAMLAAAAAFPGSSANPYLGYARVKTPAGGETLVPVCKDPYCTGCQFSVNNHHLLMSNGSCPAGCTQCEHQKYNLAMAMALSQQGAAASSLPYHQLSRPYVCNWIVGESYCGKRFGNSEELLQHLRSHTADGSAPSTSASTQASILNQFNPLFTTAGLRSAYPTAPLSPLSASRYHPYSKAGLPASLSASPYGAFNPALGPFYSPYAMYGQRLGAAAVHQ

Uniprot

H9JEY3   A0A3S2NQC8   A0A2A4JGV7   A0A2H1WKD6   A0A2W1BIT0   A0A194QK75   + More
A0A212EYV0   A0A0L7LFK6   A0A194QEF6   D6W8V3   A0A1W4WN69   A0A1Y1KWX1   A0A1B0DBX5   A0A1L8DD42   A0A0T6B9X9   A0A1B6BX88   A0A0C9R8B6   E0VDX6   A0A0L7R3G4   F4WAL4   A0A0J7L520   A0A1B6MCU0   A0A2J7QVD6   A0A0V0GA86   A0A224XQF8   A0A067R7U4   A0A023EY87   A0A0P4VSQ9   T1HG55   A0A0A9VXX9   B0W165   Q1DGT6   A0A088A7M8   A0A0M8ZZR6   A0A2P8Y3V3   A0A1L8DBL9   A0A1W4UJ93   N6UPX2   U4UDM3   A0A1B6G6U1   E2AK20   A0A2R7WHP3   A0A2P2HYT4   A0A1S3DRT4   A0A182FMV6   A0A2M4BI66   A0A2M3YZW4  

Pubmed

19121390    28756777    26354079    22118469    26227816    18362917    + More
19820115    28004739    20566863    21719571    24845553    25474469    27129103    25401762    26823975    17510324    29403074    23537049    20798317   

EMBL

BABH01023540    BABH01023541    RSAL01000150    RVE45781.1    NWSH01001575    PCG70824.1    + More
ODYU01009256    SOQ53541.1    KZ150029    PZC74768.1    KQ461198    KPJ05937.1    AGBW02011440    OWR46666.1    JTDY01001336    KOB74160.1    KQ459185    KPJ03330.1    KQ971312    EEZ99225.1    GEZM01077219    JAV63367.1    AJVK01013837    GFDF01009705    JAV04379.1    LJIG01002787    KRT84153.1    GEDC01031412    JAS05886.1    GBYB01003056    JAG72823.1    DS235088    EEB11582.1    KQ414663    KOC65417.1    GL888050    EGI68772.1    LBMM01000746    KMQ97584.1    GEBQ01006226    JAT33751.1    NEVH01010477    PNF32544.1    GECL01001049    JAP05075.1    GFTR01005624    JAW10802.1    KK852642    KDR19597.1    GBBI01004675    JAC14037.1    GDKW01001080    JAI55515.1    ACPB03012233    GBHO01043578    GBRD01009559    GDHC01018503    JAG00026.1    JAG56265.1    JAQ00126.1    DS231820    EDS44039.1    CH900432    CH477392    EAT32366.1    EAT41939.1    KQ435789    KOX74430.1    PYGN01000965    PSN38864.1    GFDF01010226    JAV03858.1    APGK01021796    KB740364    ENN80787.1    KB632275    ERL91157.1    GECZ01011611    JAS58158.1    GL440135    EFN66230.1    KK854842    PTY19162.1    IACF01001221    LAB66935.1    GGFJ01003542    MBW52683.1    GGFM01001056    MBW21807.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053240    UP000007151    UP000037510    + More
UP000053268    UP000007266    UP000192223    UP000092462    UP000009046    UP000053825    UP000007755    UP000036403    UP000235965    UP000027135    UP000015103    UP000002320    UP000008820    UP000005203    UP000053105    UP000245037    UP000192221    UP000019118    UP000030742    UP000000311    UP000079169    UP000069272   

PRIDE

H9JEY3   

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

H9JEY3   A0A3S2NQC8   A0A2A4JGV7   A0A2H1WKD6   A0A2W1BIT0   A0A194QK75   + More
A0A212EYV0   A0A0L7LFK6   A0A194QEF6   D6W8V3   A0A1W4WN69   A0A1Y1KWX1   A0A1B0DBX5   A0A1L8DD42   A0A0T6B9X9   A0A1B6BX88   A0A0C9R8B6   E0VDX6   A0A0L7R3G4   F4WAL4   A0A0J7L520   A0A1B6MCU0   A0A2J7QVD6   A0A0V0GA86   A0A224XQF8   A0A067R7U4   A0A023EY87   A0A0P4VSQ9   T1HG55   A0A0A9VXX9   B0W165   Q1DGT6   A0A088A7M8   A0A0M8ZZR6   A0A2P8Y3V3   A0A1L8DBL9   A0A1W4UJ93   N6UPX2   U4UDM3   A0A1B6G6U1   E2AK20   A0A2R7WHP3   A0A2P2HYT4   A0A1S3DRT4   A0A182FMV6   A0A2M4BI66   A0A2M3YZW4  

PDB

1VA2     E-value=0.000429967,     Score=104

KEGG

101740957    no KO assigned | (RefSeq) zinc finger protein Noc

GO

GO:0003676   GO:0046872   GO:0016020   GO:0006508   GO:0015074   GO:0007166   GO:0006032   GO:0005515   GO:0016742   GO:0003824  

Length:

450

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.08764

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00129

outside

1  -  450

 

 

Pi

227.782321

Theta

189.325029

Tajima's D

0.727108

CLR

0

CSRT

0.585070746462677

Interpretation

Uncertain