SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04952
Annotation
PREDICTED:_pickpocket_protein_28-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.099 Extracellular   Reliability : 1.346 Nuclear   Reliability : 1.06
 

Sequence

CDS
ATGATCTGTGAAAGCGAAGTTTTGGATTTGCTTTGGGTTGATTCATACGGTTTCAATACGTTGGATCGTCTTTATTCTAATATCAGCCTTGTTGAACATATATTGCAGGTGATACCAGATTTTGAAGAGTTTTTTGACAGCTGTGTTTGGCGTAACGAGTACATAGAATGTAAGAAATTATTTCAAAGAGTTCTCACATCGGAAGGCGTCTGCTACACAATGAATACGTTGGCATCATCCGAAATATTCCGGACCGAGAAGTATCTTCTTTATTTCTATTTTTTCTTTCATTAA
Protein
MICESEVLDLLWVDSYGFNTLDRLYSNISLVEHILQVIPDFEEFFDSCVWRNEYIECKKLFQRVLTSEGVCYTMNTLASSEIFRTEKYLLYFYFFFH

Summary

Similarity
Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
Pfam
PF00858   ASC
Interpro
IPR001873   ENaC        + More
IPR020903   ENaC_CS       

Ontologies

Topology

Length:
97
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03923
Exp number, first 60 AAs:
0.00158
Total prob of N-in:
0.08953
outside
1  -  97
 
 

Population Genetic Test Statistics

Pi
167.336326
Theta
136.778475
Tajima's D
0.506298
CLR
48.519126
CSRT
0.514374281285936
Interpretation
Uncertain
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