SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04951
Pre Gene Modal
BGIBMGA007996
Annotation
PREDICTED:_pickpocket_protein_28-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.16 Mitochondrial   Reliability : 1.435 Nuclear   Reliability : 1.63
 

Sequence

CDS
ATGTTTTTTTTTAGTTTACATGGAGATTTTGCTTACTTGGAATCAACAGAGATGAGCCGTAATTGGACGATAGAGGAAGGCTATAAAAGCGAAGATAACAATACATATCCAAGAAGAGGAAGGAAAAACGGGGCCGAGCCAGATTTAAAAGTTGTACTTAAAGATAACCCGGAACAGAAAGATAAGCTATGTAATAAACTTAAAAATGGTTTCAAGATATTTATACACCATCCCGCAGATTTGCCGCAGCCTTCATTGTACTATTACAGTGCGTTGTCGTCCCAAGTTTCTTCTATGGCACTAAAATTTGATATTTTGCGTACATCAAACAGTTTGGATTCATTACCCGTTGAGCAGTAA
Protein
MFFFSLHGDFAYLESTEMSRNWTIEEGYKSEDNNTYPRRGRKNGAEPDLKVVLKDNPEQKDKLCNKLKNGFKIFIHHPADLPQPSLYYYSALSSQVSSMALKFDILRTSNSLDSLPVEQ

Summary

Similarity
Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
EMBL
BABH01023503    BABH01023504    BABH01023505    JTDY01000591    KOB76548.1    JTDY01002194    + More
KOB71904.1    RSAL01000150    RVE45780.1    JTDY01002335    KOB71642.1    JTDY01005791    KOB66623.1    JTDY01008958    KOB64264.1    ODYU01012618    SOQ59034.1    NWSH01001201    PCG72148.1    KZ150309    PZC71475.1    KZ150082    PZC73838.1    KQ971362    EFA08873.2    KQ460597    KPJ13859.1    BABH01012830    ODYU01010562    SOQ55762.1    KQ459591    KPI97019.1    RSAL01000014    RVE53205.1    CVRI01000004    CRK87601.1    AGBW02014900    OWR40914.1    DS231972    EDS29854.1    AJVK01016584    EDS29857.1    AJVK01016585    AJVK01016586    DS231896    EDS44436.1    GEZM01010812    JAV93814.1    EDS29860.1    GEZM01010817    GEZM01010816    JAV93809.1    GEZM01010815    JAV93810.1    JXUM01116018    KQ565940    KXJ70514.1    GEZM01010813    JAV93812.1    CH478228    EAT33496.1    GEZM01010811    JAV93815.1    AXCP01006762    GEZM01010814    JAV93811.1    APGK01038999    APGK01039000    KB740966    ENN76926.1    AXCN02001041    KB632186    ERL89696.1    KB632286    ERL91445.1    APGK01018199    APGK01018200    KB740071    ENN81698.1    CH963847    EDW73141.1    AAAB01008986    EAA00234.4    AXCM01007075    DS232244    EDS38311.1    APCN01003288    CAQQ02380437    AJWK01034404    AJWK01034405    ADMH02001044    ETN64334.1    ATLV01023896    KE525347    KFB49821.1    KYB25719.1    KQ971327    KYB28426.1    CH933809    EDW17776.1    CH477292    EAT44535.1    ATLV01023713    KE525345    KFB49419.1    JRES01000080    KNC34298.1    AE014296    AAF50555.3    CH954178    EDV50466.2    CH480817    EDW50846.1    CM002912    KMY98102.1    EDS38312.1    OUUW01000002    SPP77191.1    CH902618    EDV40708.1    AJWK01003969    AJWK01003970    AJWK01003971    AJWK01003972    KYB25718.1    ATLV01021410    KE525318    KFB46467.1    JXUM01054263    KQ561813    KXJ77445.1    CM000159    EDW93764.1    KQ971345    EFA05007.2    AXCM01001175   
Pfam
PF00858   ASC        + More
PF11838   ERAP1_C
PF01433   Peptidase_M1
PF15880   NDUFV3
Interpro
IPR001873   ENaC        + More
IPR020903   ENaC_CS       
IPR042097   Aminopeptidase_N-like_N       
IPR014782   Peptidase_M1_dom       
IPR024571   ERAP1-like_C_dom       
IPR033581   APN2       
IPR001930   Peptidase_M1       
IPR034016   M1_APN-typ       
IPR018247   EF_Hand_1_Ca_BS       
IPR026193   NDUFV3       
Gene 3D

Ontologies

Topology

Length:
119
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00363
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01222
outside
1  -  119
 
 

Population Genetic Test Statistics

Pi
387.43164
Theta
202.157398
Tajima's D
2.956168
CLR
0.578337
CSRT
0.977401129943503
Interpretation
Uncertain
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