Gene

KWMTBOMO04947

Pre Gene Modal

BGIBMGA007997

Annotation

PREDICTED:_zinc_finger_protein_Elbow_[Papilio_polytes]

Location

Bomo_Chr9(-):2278340-2283323      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 3.759

CDS

ATGCTCACGTCAAGTAACCAGTATTTGAGACCGGATTACCTGTCGCCGCTGCCGACTACGCTCGACGCAAAAAAGAGTCCTCTGGCGCTATTGGCCCAGACTTGCAGTGCCATCGGAGCAGACGCGCCAAACCCTAAACTAATCTCGGCCGCTGAAAAGGCCAGTAAAAAGTACGACGACAAACCTATACATACCGACAACAAGCCCAGTTTCAAACCTTACGAATCGTGTTTGACTTCGAGAGAAAAGACAAGAACCCCGGAAGACAGAGCTTCTGTAAATACTCACGCCAAATCACCTCTTTCGTCGAAGGGAAGCTCTTCAAACACTCCGGTGCAAGCTAGGTGCGGTAGTAATCAGAGCTCTTCATCTCAAAGGACTTCACCACCCGCAAATCGCAAAACGCCGTCGGAAAAGTCAGACGAAAGGTCGAGTCCTCTTCAAATGTCGCCCACGCCGGCCAAATCAAACGCAGACGCAATTATCACTTCATCTGCTTCCAAGTTATCGTATACACCTACTTCTTTGTCGTCCCACACTGAAACCAAAGAAACTTCAAGCTTCAAGCCCAGCATACCTGTGACGTCGTCCGCTTTTCTCGGAGGCCTGCCTCACTCCGGATTCCCGTTACCAATGGATTTGATGACAAGCAGTCTAATGGCCGCACAACACCACGCCTTGAAAAATGGATTGAATCCGTATTTAGCTTACGCGAGGATGAAAGCGCCCGGGAGTGATTTAGGAATATGCAGAGACCCTTACTGCACAGGTTGCTCTCTAAGTTCACACTTGCTGAAATCGGCCGTGTGTCCTGCTGGATGTGCACAATGTGACCATGCCAAAACACCTTTCCCGTTACCGACTAGTCACCCGGCAGCCGCGGCTTATGCTCACGCTCAACTAGCCGCACTAGCAGCGGCATCGCAGCTACCGTATGTATGCAGCTGGATGGCAGGTGACTCCGCCTATTGCGGAAAGCGGTTCTCAACTTCGGAAGAACTGCTTCAGCACCTTAGGTCACACACAGCGAGCGGTGAATCAAGTCCGAGTCTGTCTATGCTCAGTGCAACCCATCCCTTACTTCAGAGGACGTACCCGACGCCTCCGCTGTCTCCGCTCACGCCCAGGTTCCATCCGTACAGCAAGCCTTCCCACCTGGTGTCGTCTCCATCGCTGCCGTTCCCGTTGCCACCGCATCCGTCACTCGCGGCGTATTTCCCTTCATATCCACTGTTCGGGCCGCGGCCCCTGCACCCTTGA

Protein

MLTSSNQYLRPDYLSPLPTTLDAKKSPLALLAQTCSAIGADAPNPKLISAAEKASKKYDDKPIHTDNKPSFKPYESCLTSREKTRTPEDRASVNTHAKSPLSSKGSSSNTPVQARCGSNQSSSSQRTSPPANRKTPSEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFKPSIPVTSSAFLGGLPHSGFPLPMDLMTSSLMAAQHHALKNGLNPYLAYARMKAPGSDLGICRDPYCTGCSLSSHLLKSAVCPAGCAQCDHAKTPFPLPTSHPAAAAYAHAQLAALAAASQLPYVCSWMAGDSAYCGKRFSTSEELLQHLRSHTASGESSPSLSMLSATHPLLQRTYPTPPLSPLTPRFHPYSKPSHLVSSPSLPFPLPPHPSLAAYFPSYPLFGPRPLHP

Uniprot

A0A2H1WYG0   A0A194QLV2   A0A2W1BI95   A0A2A4JNY2   A0A3S2PA87   A0A194QCR6   + More
A0A0L7L5T6   A0A212EYV6   A0A1Y1N6I1   D6W8V5   N6UJE5   A0A0C9RN13   A0A1W4WD28   Q16R45   A0A336MCL8   U5EQ13   A0A1S4FSH2   A0A026VUV8   A0A1B0CTT5   A0A158NPB2   A0A195AYR0   A0A1B0CEJ3   A0A154PLS0   A0A2J7QVD2   A0A0C9RN15   A0A2P8XAG3   A0A0N0BG84   A0A310SPI1   E2B7M1   K7IU05   E0VDX5   A0A067RSZ2   A0A1B6KWN0   A0A195DYG9   E9ILV3   F4WAL9   A0A154PK41   A0A195CHE6   A0A158NPB3   E2B7M4   A0A195CIH1   B0W166   A0A195F829   A0A151WXS1   A0A0J7L520   A0A1S3D1F9   D6W8V3   A0A0C9R8B6   A0A310SA62   A0A195DZ25   A0A1B6BX88   A0A195AY11   F4WAL4   A0A1J1I6Z5   A0A088A7M8   A0A023EY87   A0A1Y1KWX1   A0A0A9VXX9   A0A224XQF8   A0A1B6IHG8   A0A026VU90   A0A0V0GA86   E9ILV0   A0A194QK75   A0A195F977   A0A088A7J6   A0A0T6B9X9   A0A1W4WN69   A0A0P4VSQ9   T1HG55   A0A212EYV0   A0A2W1BIT0   A0A2H1WKD6   A0A2A4JGV7   A0A0L7R3G4   A0A2J7QVD6   A0A0J7KNX7   A0A2P2HYT4   E2AK17   E2AK20   A0A067R7U4   A0A034VFC9   A0A194QEF6   A0A1B6G6U1   A0A2P8Y3V3   A0A1B6MCU0  

Pubmed

26354079    28756777    26227816    22118469    28004739    18362917    + More
19820115    23537049    17510324    24508170    30249741    21347285    29403074    20798317    20075255    20566863    24845553    21282665    21719571    25474469    25401762    26823975    27129103    25348373   

EMBL

ODYU01012025    SOQ58109.1    KQ461198    KPJ05940.1    KZ150029    PZC74772.1    + More
NWSH01001006    PCG73153.1    RSAL01000150    RVE45778.1    KQ459185    KPJ03333.1    JTDY01002761    KOB70775.1    AGBW02011440    OWR46665.1    GEZM01011895    JAV93349.1    KQ971312    EEZ99244.1    APGK01021791    APGK01021792    KB740364    ENN80786.1    GBYB01008456    GBYB01008459    GBYB01008460    JAG78223.1    JAG78226.1    JAG78227.1    CH477725    EAT36865.2    UFQS01000684    UFQT01000684    SSX06189.1    SSX26543.1    GANO01003472    JAB56399.1    KK107894    QOIP01000014    EZA47306.1    RLU14907.1    AJWK01027954    ADTU01022319    ADTU01022320    ADTU01022321    KQ976703    KYM77099.1    AJWK01008920    KQ434943    KZC12228.1    NEVH01010477    PNF32540.1    GBYB01008461    JAG78228.1    PYGN01016036    PSN28994.1    KQ435789    KOX74434.1    KQ760483    OAD60201.1    GL446193    EFN88299.1    DS235088    EEB11581.1    KK852481    KDR22939.1    GEBQ01024176    JAT15801.1    KQ980066    KYN17886.1    GL764129    EFZ18495.1    GL888050    EGI68777.1    KZC12226.1    KQ977791    KYM99856.1    ADTU01022339    EFN88302.1    KYM99863.1    DS231820    EDS44040.1    KQ981727    KYN36770.1    KQ982668    KYQ52481.1    LBMM01000746    KMQ97584.1    EEZ99225.1    GBYB01003056    JAG72823.1    KQ762334    OAD55941.1    KYN17879.1    GEDC01031412    JAS05886.1    KYM77091.1    EGI68772.1    CVRI01000038    CRK94193.1    GBBI01004675    JAC14037.1    GEZM01077219    JAV63367.1    GBHO01043578    GBRD01009559    GDHC01018503    JAG00026.1    JAG56265.1    JAQ00126.1    GFTR01005624    JAW10802.1    GECU01021351    JAS86355.1    EZA47302.1    RLU14906.1    GECL01001049    JAP05075.1    EFZ18480.1    KPJ05937.1    KYN36762.1    LJIG01002787    KRT84153.1    GDKW01001080    JAI55515.1    ACPB03012233    OWR46666.1    PZC74768.1    ODYU01009256    SOQ53541.1    NWSH01001575    PCG70824.1    KQ414663    KOC65417.1    PNF32544.1    LBMM01004938    KMQ91971.1    IACF01001221    LAB66935.1    GL440135    EFN66227.1    EFN66230.1    KK852642    KDR19597.1    GAKP01018161    GAKP01018159    GAKP01018153    GAKP01018145    JAC40807.1    KPJ03330.1    GECZ01011611    JAS58158.1    PYGN01000965    PSN38864.1    GEBQ01006226    JAT33751.1   

Proteomes

UP000053240    UP000218220    UP000283053    UP000053268    UP000037510    UP000007151    + More
UP000007266    UP000019118    UP000192223    UP000008820    UP000053097    UP000279307    UP000092461    UP000005205    UP000078540    UP000076502    UP000235965    UP000245037    UP000053105    UP000008237    UP000002358    UP000009046    UP000027135    UP000078492    UP000007755    UP000078542    UP000002320    UP000078541    UP000075809    UP000036403    UP000079169    UP000183832    UP000005203    UP000015103    UP000053825    UP000000311   

Pfam

PF00096   zf-C2H2        + More
PF00651   BTB

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR000210   BTB/POZ_dom       
IPR011333   SKP1/BTB/POZ_sf       

SUPFAM

SSF57667   SSF57667        + More
SSF54695   SSF54695       

ProteinModelPortal

A0A2H1WYG0   A0A194QLV2   A0A2W1BI95   A0A2A4JNY2   A0A3S2PA87   A0A194QCR6   + More
A0A0L7L5T6   A0A212EYV6   A0A1Y1N6I1   D6W8V5   N6UJE5   A0A0C9RN13   A0A1W4WD28   Q16R45   A0A336MCL8   U5EQ13   A0A1S4FSH2   A0A026VUV8   A0A1B0CTT5   A0A158NPB2   A0A195AYR0   A0A1B0CEJ3   A0A154PLS0   A0A2J7QVD2   A0A0C9RN15   A0A2P8XAG3   A0A0N0BG84   A0A310SPI1   E2B7M1   K7IU05   E0VDX5   A0A067RSZ2   A0A1B6KWN0   A0A195DYG9   E9ILV3   F4WAL9   A0A154PK41   A0A195CHE6   A0A158NPB3   E2B7M4   A0A195CIH1   B0W166   A0A195F829   A0A151WXS1   A0A0J7L520   A0A1S3D1F9   D6W8V3   A0A0C9R8B6   A0A310SA62   A0A195DZ25   A0A1B6BX88   A0A195AY11   F4WAL4   A0A1J1I6Z5   A0A088A7M8   A0A023EY87   A0A1Y1KWX1   A0A0A9VXX9   A0A224XQF8   A0A1B6IHG8   A0A026VU90   A0A0V0GA86   E9ILV0   A0A194QK75   A0A195F977   A0A088A7J6   A0A0T6B9X9   A0A1W4WN69   A0A0P4VSQ9   T1HG55   A0A212EYV0   A0A2W1BIT0   A0A2H1WKD6   A0A2A4JGV7   A0A0L7R3G4   A0A2J7QVD6   A0A0J7KNX7   A0A2P2HYT4   E2AK17   E2AK20   A0A067R7U4   A0A034VFC9   A0A194QEF6   A0A1B6G6U1   A0A2P8Y3V3   A0A1B6MCU0  

KEGG

101740813    no KO assigned | (RefSeq) zinc finger protein Elbow

GO

GO:0003676   GO:0016021   GO:0046872   GO:0006810   GO:0006508   GO:0015074   GO:0007166   GO:0006032   GO:0005515   GO:0016742   GO:0003824  

Length:

419

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0448

Exp number, first 60 AAs:

0.00023

Total prob of N-in:

0.00872

outside

1  -  419

 

 

Pi

312.819778

Theta

235.088377

Tajima's D

1.146446

CLR

0.06071

CSRT

0.702164891755412

Interpretation

Uncertain