Gene

KWMTBOMO04946

Annotation

PREDICTED:_putative_nuclease_HARBI1_[Acyrthosiphon_pisum]

Location

Bomo_Chr9(+):2252454-2253561      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.25

CDS

ATGAAGTCCTTGTATTTTGAATATTTGATCGGCACAACAACTCTGAGTGAAATAATTGAACACACATGCAAGAGTTTGTGGATATGTTTGCAACCTACATATATGCCTGAAAAAACAGAAGAGGATTGGATAAATATAGCAAATTTTTATTTTGAAAGAACACATTTTCCTAATTGTCTTGGTTCCATAGATGGAAAACATATACGAATAGAAAGGCCAGAAAATACTGGTTCAGAAGCCTTCAATTACAAAAAGTATTATTCTTTAATATTATTAGCTATAGCTGATGCAGACTATTGCTTTACTGCTATAGATGTTGGGGCATATGGATCGAATAGCGACTCTAGCGTTTTTAAAAACTCAAATTTTGGCAAAAGGTTTTTGAACAACCAAATGCATTTACCAGAATCTGCAACATTACCTGATTATGAGGAAGTCGGACCTTTACCGTTTGTTTTCGTAGGCGATGAAGCTTTTCCACTTATGGAGCACTTAATGAGGCCATATCCAAATAGAAATTTATCCATAAAACAAAGAGTTTATAACTATAGATTATCTTATGCCAGAAGGACTGTCGAATGTGCATTTGGGATCATGGCAAATAAATGGCGTATTTTACATAGACCATTAGATGTGAAATTAGATTTTTGCGACCATATTATTAAAGCTTGTTGCATATTGCACAACTTTGTAAGACAACATGACGGTAAACAGCTTAATGAATCGTTTCAAGTTTCAGAGATGCAGGGTATTGCTTCAATTCGTACGCGTTCTAGCAATAACGTTATAGATGTAAGAAATTTGTTTGCTGATTATTTTACATCTACTGCGGGCGCGTTGAGTTGGCAATATGAAAATATTTAA

Protein

MKSLYFEYLIGTTTLSEIIEHTCKSLWICLQPTYMPEKTEEDWINIANFYFERTHFPNCLGSIDGKHIRIERPENTGSEAFNYKKYYSLILLAIADADYCFTAIDVGAYGSNSDSSVFKNSNFGKRFLNNQMHLPESATLPDYEEVGPLPFVFVGDEAFPLMEHLMRPYPNRNLSIKQRVYNYRLSYARRTVECAFGIMANKWRILHRPLDVKLDFCDHIIKACCILHNFVRQHDGKQLNESFQVSEMQGIASIRTRSSNNVIDVRNLFADYFTSTAGALSWQYENI

Uniprot

J9K2X0   A0A2S2P1E6   A0A2S2NMG1   A0A3S2N8Q7   X1WRY0   A0A2S2NBK1   + More
J9JIY0   J9M210   X1WMG6   A0A2J7QY78   A0A3S2P049   X1WIR3   J9K189   X1X279   A0A1B6KID6   J9K6X4   J9KI87   J9JMZ1   J9LWL5   A0A2S2P4H9   J9K876   J9JZA8   J9KD14   A0A1B6JBR0   A0A2S2P0U9   J9LWQ7   A0A2H8TIP0   A0A1E1WUI4   X1WIS8   X1WSE6   X1WZ84   A0A2H1VYY0   A0A2S2N8V8   X1WJJ7   J9KJZ3   A0A3S2TIS0   A0A2S2PAI8   J9K6E0   X1WXX7   A0A3S2L7Q6   J9LQ94   A0A2H8TVR0   A0A3S2L882   X1WKK4   S4NNW9   J9LKL3   A0A2S2PHY3   A0A0P4VZE0   X1XP58   A0A2J7PF61   X1WUC2   X1WQE4   A0A2G8JDA0   J9LS48   X1X0T9   J9K6X6   X1WPK0   A0A2S2PHB1   A0A3S2LPP0   A0A3S2N2Y6   X1XCN9   A0A0P4W2I2   B2GUF0   F6RCZ7   A0A0N0PET3   A0A2J7PD70   J9LAJ7   A0A0P4W5Q8   J9L7N5   A0A2J7QB64   A0A2J7PGM8   S4NZ68   A0A1W4X8I4   A0A147A2E9   A0A2J7PP30   A0A3P9KIC5   J9L3Z7   A0A2J7R0P9   A0A3P9K7T1   A0A1B6JTF8   A0A3B3QUT2   A0A3P9LX78   A0A3Q0QRU5   J9KFW1   A0A2J7R7I8   A0A2H1WK04   X1WIL6   A0A2G9RW26   A0A0N7ZBJ2   A0A2S2NUS4   A0A2S2NK21   J9L5G0   A1A649   A0A1B6HZT2   A0A1E1WI72   A0A3B3T7F3   A0A3S2LK83   A0A3Q1GW95   X1XF03   J9JQ73  

Pubmed

23622113    29023486    20431018    26354079    17554307    29240929    + More

EMBL

ABLF02014609    GGMR01010668    MBY23287.1    GGMR01005523    MBY18142.1    RSAL01000782    + More
RVE41156.1    ABLF02018117    GGMR01001869    MBY14488.1    ABLF02030395    ABLF02040883    ABLF02040911    ABLF02039417    NEVH01009123    PNF33550.1    RSAL01000073    RVE48993.1    ABLF02016720    ABLF02014546    ABLF02018112    ABLF02054180    ABLF02057104    GEBQ01028774    JAT11203.1    ABLF02010423    ABLF02036670    ABLF02023720    ABLF02023722    ABLF02049240    ABLF02035814    GGMR01011187    MBY23806.1    ABLF02013825    ABLF02039608    ABLF02029176    ABLF02029180    GECU01014635    GECU01011035    JAS93071.1    JAS96671.1    GGMR01010474    MBY23093.1    ABLF02010022    GFXV01002192    MBW13997.1    GDQN01000361    JAT90693.1    ABLF02010382    ABLF02017443    ABLF02042272    ABLF02053436    ABLF02063701    ABLF02058817    ODYU01005305    SOQ46028.1    GGMR01000966    MBY13585.1    ABLF02025001    ABLF02017112    RSAL01001047    RSAL01000133    RSAL01000110    RVE40968.1    RVE46314.1    RVE47157.1    GGMR01013773    MBY26392.1    ABLF02019581    ABLF02007334    RSAL01001281    RVE40853.1    ABLF02024888    GFXV01005837    MBW17642.1    RSAL01000093    RVE47949.1    ABLF02019551    GAIX01012104    JAA80456.1    ABLF02031827    GGMR01016408    MBY29027.1    GDRN01100681    JAI58521.1    ABLF02065969    NEVH01026085    PNF14965.1    ABLF02015607    ABLF02006842    ABLF02017285    ABLF02017286    ABLF02017287    ABLF02023975    ABLF02023979    ABLF02023981    ABLF02043231    ABLF02053316    ABLF02058285    MRZV01002436    PIK33713.1    ABLF02004403    ABLF02023972    ABLF02016114    ABLF02015081    GGMR01016212    MBY28831.1    RSAL01000893    RVE41064.1    RSAL01004553    RVE40126.1    ABLF02018875    ABLF02018876    ABLF02018877    GDRN01090017    JAI60545.1    BC166249    AAI66249.1    AAMC01113955    AAMC01113956    AAMC01113957    AAMC01113958    AAMC01113959    AAMC01113960    AAMC01113961    AAMC01113962    AAMC01113963    AAMC01113964    KQ459805    KPJ19882.1    NEVH01026393    PNF14277.1    ABLF02012792    GDRN01090013    JAI60547.1    ABLF02015257    ABLF02060247    NEVH01027118    NEVH01016302    NEVH01007440    NEVH01000280    PNF13625.1    PNF25824.1    PNF35689.1    PNF43673.1    NEVH01025174    PNF15485.1    GAIX01011467    JAA81093.1    GCES01013981    JAR72342.1    NEVH01023280    PNF18071.1    ABLF02013602    ABLF02013605    ABLF02053091    ABLF02066812    NEVH01008226    PNF34407.1    GECU01005239    JAT02468.1    NEVH01006731    PNF36798.1    ODYU01009172    SOQ53415.1    ABLF02017213    KV931512    PIO32080.1    GDRN01082635    JAI61800.1    GGMR01008300    MBY20919.1    GGMR01004653    MBY17272.1    ABLF02007889    ABLF02010298    BC128984    AAI28985.1    GECU01027536    JAS80170.1    GDQN01004369    JAT86685.1    RSAL01000083    RVE48487.1    ABLF02005780    ABLF02010250    ABLF02016429   

Proteomes

UP000007819    UP000283053    UP000235965    UP000230750    UP000008143    UP000053240    + More
UP000192223    UP000265180    UP000261540    UP000261340    UP000257200   

Pfam

PF13359   DDE_Tnp_4        + More
PF10545   MADF_DNA_bdg

Interpro

IPR027806   HARBI1_dom        + More
IPR006578   MADF-dom       

ProteinModelPortal

J9K2X0   A0A2S2P1E6   A0A2S2NMG1   A0A3S2N8Q7   X1WRY0   A0A2S2NBK1   + More
J9JIY0   J9M210   X1WMG6   A0A2J7QY78   A0A3S2P049   X1WIR3   J9K189   X1X279   A0A1B6KID6   J9K6X4   J9KI87   J9JMZ1   J9LWL5   A0A2S2P4H9   J9K876   J9JZA8   J9KD14   A0A1B6JBR0   A0A2S2P0U9   J9LWQ7   A0A2H8TIP0   A0A1E1WUI4   X1WIS8   X1WSE6   X1WZ84   A0A2H1VYY0   A0A2S2N8V8   X1WJJ7   J9KJZ3   A0A3S2TIS0   A0A2S2PAI8   J9K6E0   X1WXX7   A0A3S2L7Q6   J9LQ94   A0A2H8TVR0   A0A3S2L882   X1WKK4   S4NNW9   J9LKL3   A0A2S2PHY3   A0A0P4VZE0   X1XP58   A0A2J7PF61   X1WUC2   X1WQE4   A0A2G8JDA0   J9LS48   X1X0T9   J9K6X6   X1WPK0   A0A2S2PHB1   A0A3S2LPP0   A0A3S2N2Y6   X1XCN9   A0A0P4W2I2   B2GUF0   F6RCZ7   A0A0N0PET3   A0A2J7PD70   J9LAJ7   A0A0P4W5Q8   J9L7N5   A0A2J7QB64   A0A2J7PGM8   S4NZ68   A0A1W4X8I4   A0A147A2E9   A0A2J7PP30   A0A3P9KIC5   J9L3Z7   A0A2J7R0P9   A0A3P9K7T1   A0A1B6JTF8   A0A3B3QUT2   A0A3P9LX78   A0A3Q0QRU5   J9KFW1   A0A2J7R7I8   A0A2H1WK04   X1WIL6   A0A2G9RW26   A0A0N7ZBJ2   A0A2S2NUS4   A0A2S2NK21   J9L5G0   A1A649   A0A1B6HZT2   A0A1E1WI72   A0A3B3T7F3   A0A3S2LK83   A0A3Q1GW95   X1XF03   J9JQ73  

KEGG

105842729    no KO assigned | (RefSeq) piggyBac transposable element-derived protein 3-like

GO

GO:0016021  

Length:

287

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.18221

Exp number, first 60 AAs:

0.00115

Total prob of N-in:

0.01875

outside

1  -  287

 

 

Pi

138.832696

Theta

147.657308

Tajima's D

0.010583

CLR

32.6107

CSRT

0.379031048447578

Interpretation

Uncertain