SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04945
Annotation
hypothetical_protein_L798_04777_[Zootermopsis_nevadensis]
Location in the cell
Nuclear   Reliability : 4.609
 

Sequence

CDS
ATGTCGTCGACCGAGTCGGAGTCTGTTTCAAATGCAGAGTACGAAAGTTTATCCCAGAAAATCATCGTGGAAGTACAGAAAAGACCAGCTTTATACGATACTACTTTGCGTCAATACAGTGATAGAAATGTGAAAAATAAACTTTGGGAGGAAGTTTATCACAACGTAGTTAATAATTGGATGACACTGTCGGAGGCTGAGAAAAAAAAGAAGGGTAGTACAATACAAAAGAAATGGAAGAATATGCGCGACAGTTTTTCTAAAGAATTAGCTATACAGCGTGGTAAATCTGGTCAAGGTGCTATAAAAAAGAAAAAGTACGTTCATTTCGATTCACTGTTGTTTTTGGTACCATCTTTACAAAAAAGGGAGACTAGCAGTAATATCGAATTTACTTCACAAGATAACCCTGATACGGACTTATCTGAAACCCTTCCACTAACGAATAGTAATCGAACCCCATCCAGTAAGAAGGCTTCCAAAAGCCGAAGTAGCTGTGAAGATTATGAACAAAAATTGTTAAATTTTTTGAATACAAAGGAGAATGCGTGTGAATATGACGAAGATATAAACTTTTCACAAATGATTGTACCAATGTTACGGAAACTTAATGACGATCAGAAACATTTTGCCAAAGTAGAAATTATGAATATTTTGCAAAAAGCCAAATCTTTCTATCCATTCGAAACACCAATTCGTAATCAAAGACCAAGATCACATTTGTCATTCACGCAAACGTCGTCTCCGCAATCATATTATACATATTCCCCATCTCCACCTCCAACCATGCCGATAATGTCACCAGTTTCAACACCAGTACGACAGCTTGTGTCAGGACCTGCAAAACAAACCATCTATTTGCCACTTAATACTCCTGTTCCACCAACATTACAAGCAACCGTGCATTCTCTTCAAGAACTCGAGCAACAAGAACAACAGTTACAATATGCACAAAATGAACAAGAAGAGCCTACAGCAGCCAATTATCTGTCGCAATTTCAAGAACAATAA
Protein
MSSTESESVSNAEYESLSQKIIVEVQKRPALYDTTLRQYSDRNVKNKLWEEVYHNVVNNWMTLSEAEKKKKGSTIQKKWKNMRDSFSKELAIQRGKSGQGAIKKKKYVHFDSLLFLVPSLQKRETSSNIEFTSQDNPDTDLSETLPLTNSNRTPSSKKASKSRSSCEDYEQKLLNFLNTKENACEYDEDINFSQMIVPMLRKLNDDQKHFAKVEIMNILQKAKSFYPFETPIRNQRPRSHLSFTQTSSPQSYYTYSPSPPPTMPIMSPVSTPVRQLVSGPAKQTIYLPLNTPVPPTLQATVHSLQELEQQEQQLQYAQNEQEEPTAANYLSQFQEQ

Summary

Pfam
PF10545   MADF_DNA_bdg        + More
PF13499   EF-hand_7
PF02944   BESS
Interpro
IPR039353   TF_Adf1        + More
IPR006578   MADF-dom       
IPR004210   BESS_motif       
IPR011992   EF-hand-dom_pair       
IPR002048   EF_hand_dom       
IPR018247   EF_Hand_1_Ca_BS       
SUPFAM
SSF47473   SSF47473       

Ontologies

Topology

Subcellular location
Nucleus  
Length:
336
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01222
outside
1  -  336
 
 

Population Genetic Test Statistics

Pi
149.78622
Theta
135.630337
Tajima's D
0.094669
CLR
32.6107
CSRT
0.397930103494825
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号