SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04943
Pre Gene Modal
BGIBMGA008000
Annotation
PREDICTED:_IQ_and_AAA_domain-containing_protein_1-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.242 Nuclear   Reliability : 1.422
 

Sequence

CDS
ATGCAGGAGCTGATAAAAACTGTTGAAAATAGAATCATAGAAATAAAAAATGAATTGCAAAATTTAGAATGTAGTCAGTGTCATTTCGTCGGTAACGGTGTCGCTCGGGAGATTCTTACACCGGACAACACACAATTAAACGATCTTCCATTAGTATTTAAAAGGTGTGATGAAATCGAAACTTTGATAAAGGAGACTTACAAGAAAATTCAAGGAAAAAAAGCCATAGATGATCTAACTAAGCCGAAAGATGATCAATCTATTAAAAATAAAACATTAGTAAAAGCAATCAATTGGTGGGAGGATGACTACGAAAGTGATTTATCACAGATCAGTTTAGAAAAAGACGAAGATAAAATATCTGAAGACATTATGAAAAGCAGATATTTCATTGATATGATTAAATCGCACGAAAAGTCAAGACAAACAATCAGCTTGATGCGAAGTCGAGCGTACAGTAGACGAATCTGGGAGAGAGAATTAAGCGGCACATTGAAACACGCTCCTTACGCTTTGAGGGAAAAAAGTGCCAATCTCATTCAAATCGTTTTAAGAGCTTATTTCGCAGCAAAACGTAAGGCCCAATTGAAAATAAGAAACGATGAAATATTAGGCCTTCGGTTGATCGGATCTGCTAGATTACAGATGGCAATTAATACGGCGGATGACAAAGAAGTAATCCTACTCAAATATCAGGGGGAATGCGAACAGCAAAGCAAAATAACAAAACAAAGATTAATTGAATCGAAAGGAGCTGAATTAATGGAAGATTACAGGGGTTTTATTAGAAACTGGTTTTATGATTGGTAA
Protein
MQELIKTVENRIIEIKNELQNLECSQCHFVGNGVAREILTPDNTQLNDLPLVFKRCDEIETLIKETYKKIQGKKAIDDLTKPKDDQSIKNKTLVKAINWWEDDYESDLSQISLEKDEDKISEDIMKSRYFIDMIKSHEKSRQTISLMRSRAYSRRIWERELSGTLKHAPYALREKSANLIQIVLRAYFAAKRKAQLKIRNDEILGLRLIGSARLQMAINTADDKEVILLKYQGECEQQSKITKQRLIESKGAELMEDYRGFIRNWFYDW

Summary

Pfam
PF00004   AAA
Interpro
IPR027417   P-loop_NTPase        + More
IPR003959   ATPase_AAA_core       
IPR033379   Acid_Pase_AS       
IPR029033   His_PPase_superfam       
IPR000048   IQ_motif_EF-hand-BS       
SUPFAM
SSF52540   SSF52540        + More
SSF53254   SSF53254       
Gene 3D

Ontologies

Topology

Length:
269
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00279
Exp number, first 60 AAs:
0
Total prob of N-in:
0.06201
outside
1  -  269
 
 

Population Genetic Test Statistics

Pi
356.407531
Theta
189.938142
Tajima's D
2.682894
CLR
20.137298
CSRT
0.960301984900755
Interpretation
Uncertain
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