Silkworm Genome Informatics Database

Gene

KWMTBOMO04942

Pre Gene Modal

BGIBMGA008000

Annotation

PREDICTED:_IQ_and_AAA_domain-containing_protein_1-like_[Bombyx_mori]

Location

Bomo_Chr9(-):2081509-2083264 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.827 Nuclear Reliability : 2.158

CDS

ATGGAGGTTTTAGTCAACGTACAGGACGACATGAGAAACGAGTACAAAAAACTAAAAGCTGCCTTGATTGAAGACTCCACACGAAATAATGAAAAAATACCAGAAGCAATAAAAAAAGTATTGAAACCAAAATTTAAGCATAAAAAATTCGCAAAAGTTTCGAACGATAACACTAGTGAACTCATTGAGAATCTTGTTAATCGAGGCATCCTAATAGAATATCCTAAAACGAAACTAGAAGATTTTATTGGTGATCACAACTTTGCCGGAGAAGATTTACGTTACACGTTTCAGTGA

Protein

MEVLVNVQDDMRNEYKKLKAALIEDSTRNNEKIPEAIKKVLKPKFKHKKFAKVSNDNTSELIENLVNRGILIEYPKTKLEDFIGDHNFAGEDLRYTFQ

Uniprot

H9JEQ3 A0A2A4J8Q7 A0A3S2NCV3 A0A2H1WQ12 A0A2W1BBN2 A0A194QKL8 + More
A0A194QCZ6 A0A212EYT0 F1LX47 S6CVU2

Pubmed

19121390 28756777 26354079 22118469 15057822 23938757 + More

EMBL

BABH01023479 NWSH01002337 PCG68497.1 RSAL01000211 RVE44209.1 ODYU01010195 + More
SOQ55153.1 KZ150301 PZC71535.1 KQ461198 KPJ05944.1 KQ459185 KPJ03337.1 AGBW02011440 OWR46663.1 AABR07068303 AABR07068304 HF586475 CCQ71312.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000053240 UP000053268 UP000007151 + More
UP000002494

PRIDE

H9JEQ3 F1LX47

Pfam

PF00004 AAA + More
PF00612 IQ

Interpro

IPR027417   P-loop_NTPase        + More
IPR003959   ATPase_AAA_core
IPR003593   AAA+_ATPase
IPR000048   IQ_motif_EF-hand-BS

SUPFAM

SSF52540 SSF52540

ProteinModelPortal

H9JEQ3 A0A2A4J8Q7 A0A3S2NCV3 A0A2H1WQ12 A0A2W1BBN2 A0A194QKL8 + More
A0A194QCZ6 A0A212EYT0 F1LX47 S6CVU2

KEGG

101740670 no KO assigned | (RefSeq) IQ and AAA domain-containing protein 1-like

GO

GO:0005524

Length:

98

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.25439

outside

1 - 98

Pi

458.366771

Theta

190.218359

Tajima's D

4.66283

CLR

0.652657

CSRT

0.999950002499875

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics