Silkworm Genome Informatics Database

Gene

KWMTBOMO04941

Pre Gene Modal

BGIBMGA008000

Annotation

PREDICTED:_IQ_and_AAA_domain-containing_protein_1-like_[Bombyx_mori]

Location

Bomo_Chr9(-):2078820-2081084 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.211 Mitochondrial Reliability : 1.7 Nuclear Reliability : 1.088

CDS

ATGAGACAAGCTTTACCATACAATGGTGACACAAGGAGCATGTGGTGGAGGGTGTGTCGTGATGTAAGCCAGGGTCATCAAAAAATACTACTCGTTGGACCCAATGGCTGCGGTAAAACTAAACTAGTACATGCGCTGGCAACACTAAACAATGCAGTTTTATTTGTATTGGATCCGACGGTTTTGAAAAATGAATTAACAGCGATACACCTGGATAAGCTGTTGGACAGCATCAGGACTTGCGCACTGAATGTTCAACCATCTGCGATATACATAAAACATTTACAGTATATTTTTTGCAAAAAGGTGCCTACCGAAGAGGATTTAGGGATCAGTCCAAAAATAATCAAAAGGCACATCGTGAAGAAATTACTAAGAACGACACACAGAACACATAGAATAACTATTATAGGTATGTATCGTATCGCATTAACTTCATAG

Protein

MRQALPYNGDTRSMWWRVCRDVSQGHQKILLVGPNGCGKTKLVHALATLNNAVLFVLDPTVLKNELTAIHLDKLLDSIRTCALNVQPSAIYIKHLQYIFCKKVPTEEDLGISPKIIKRHIVKKLLRTTHRTHRITIIGMYRIALTS

Uniprot

A0A2A4J8Q7 A0A212EYT0 A0A2W1BBN2 A0A194QKL8 A0A194QCZ6 A0A194QY98 + More
A0A194PG59 A0A1S3QAQ9 A0A1S3QCC7 A0A315VDP3 A0A3L7HA32

Pubmed

22118469 28756777 26354079 29703783 29704459

EMBL

NWSH01002337 PCG68497.1 AGBW02011440 OWR46663.1 KZ150301 PZC71535.1 + More
KQ461198 KPJ05944.1 KQ459185 KPJ03337.1 KQ460953 KPJ10274.1 KQ459605 KPI92013.1 NHOQ01001926 PWA20964.1 RAZU01000251 RLQ62181.1

Proteomes

UP000218220 UP000007151 UP000053240 UP000053268 UP000087266 UP000273346 + More

Pfam

PF00004 AAA + More
PF00612 IQ

Interpro

IPR027417   P-loop_NTPase        + More
IPR003959   ATPase_AAA_core
IPR003593   AAA+_ATPase
IPR000048   IQ_motif_EF-hand-BS

SUPFAM

SSF52540 SSF52540

ProteinModelPortal

A0A2A4J8Q7 A0A212EYT0 A0A2W1BBN2 A0A194QKL8 A0A194QCZ6 A0A194QY98 + More
A0A194PG59 A0A1S3QAQ9 A0A1S3QCC7 A0A315VDP3 A0A3L7HA32

PDB

5Z6R E-value=1.98759e-05, Score=108

KEGG

101740670 no KO assigned | (RefSeq) IQ and AAA domain-containing protein 1-like

GO

GO:0005524 GO:0015074 GO:0006810 GO:0006508 GO:0007166 GO:0006032 GO:0005515 GO:0016742 GO:0003824

Length:

146

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.06817

Exp number, first 60 AAs:

0.0562

Total prob of N-in:

0.19168

outside

1 - 146

Pi

283.043433

Theta

141.541679

Tajima's D

2.826233

CLR

0.517117

CSRT

0.969151542422879

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics