Gene

KWMTBOMO04937  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008001

Annotation

PREDICTED:_myc_box-dependent-interacting_protein_1_isoform_X1_[Plutella_xylostella]

Location

Bomo_Chr9(-):1984226-2047584      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.689

CDS

ATGGAAGCGATCACGGAGGTTTACGAGAGCGGCTGGTCAGGTCACGACCTGCTGTACGTCCAAGCTCAGAACATGGAGGTCCTTTGGCAGGACTTCTCGCACAAACTCGGCGACCAAGTACTCATACCGCTCAACACGTATACGAACCAATTCCCCGAAGTCAGGAAAAAAATCGAGAAACGTGGTCGCAAACTCGTAGACTACGACAGTCAAAGGCACAGCTTCCAGAACTTACAGGCGAATGCCGCTAAAAGAAGGGACGACGTAAAGGTGACGAAGGGACGCGAACAACTCGAAGAGGCCAAACGCACCTACGAAATATTGAACTCTGAACTGCACGACGAGCTGCCCGCGCTGTACGACTCCCGGGTATTGTTCTACGTCAACAACTTGCAAACACTCTTCTCCGCCGAGCAGGTCTTCCATTTCGAAAGCTCCAAGGTGTTCGCCGAACTAGAAGCGGTAACGGACAAGCTAGCGAACGACTGTCAGCGCGGCTCGTACACGAAGAAGGCGAACAACGTGTCCCCTCCCCCGCTGCCCGCGCTCCCCGCCGCCCCCGCGCACAACGGGAACGCCGCGCACACCAACACCGTGCAGACGCCCCCCTCCCCCGCGCTCAACGGCGACTCCCCCACGCTCTCCGGGAACAAAGAGTCGGCTCCGGTCAAAGAGACCGCACCGGACCCCAAAGACCCCGGAACGCCCGTCAAAGAGCCAGCTCCGGTTGCCAAAGAACCCGTATCGGTTGCCGAAGAACCGACGCCGATCAACAGCGAAACCGTTAAACCCGAGACTCCGCCCCCCACAATCGAAACGACCAATAGCAGCGAGCCCGCGACGGACAACAAAGTCGAACAGCTCTACGACATACCCGTCGGACCTACTACAGTCGTCGAGAAAATGAATAATAACGAAGAAACAAATAAACATACAAATGTCGAACAGAATTTAATCGAGAAGAACGAAAAGCGGAACAGTGAGAACGCCGAGGAGGTATACGACATACCAGTCGGAGCGACGCTAGCCGGCCTGCCGCCCGGCGTGCTGTACCGCGTGCGGGCCACATACCGGTACACGCGCGAGGATTCGGACGAGCTCTCGTTCGAAGTCGGCGACATCATACGCGTTGTCGAATACGACGATCCAGATGAACAGGAAGAGGGCTGGCTGATGGGCATCAAAGAAACGACCAATGAAAAAGGAATGTTCCCGGCGAACTTCACGCGGCCGATCTGA

Protein

MEAITEVYESGWSGHDLLYVQAQNMEVLWQDFSHKLGDQVLIPLNTYTNQFPEVRKKIEKRGRKLVDYDSQRHSFQNLQANAAKRRDDVKVTKGREQLEEAKRTYEILNSELHDELPALYDSRVLFYVNNLQTLFSAEQVFHFESSKVFAELEAVTDKLANDCQRGSYTKKANNVSPPPLPALPAAPAHNGNAAHTNTVQTPPSPALNGDSPTLSGNKESAPVKETAPDPKDPGTPVKEPAPVAKEPVSVAEEPTPINSETVKPETPPPTIETTNSSEPATDNKVEQLYDIPVGPTTVVEKMNNNEETNKHTNVEQNLIEKNEKRNSENAEEVYDIPVGATLAGLPPGVLYRVRATYRYTREDSDELSFEVGDIIRVVEYDDPDEQEEGWLMGIKETTNEKGMFPANFTRPI

Similarity

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.

Uniprot

H9JEQ4   A0A2W1BKB7   A0A2H1WSY5   A0A3S2NNB4   A0A212EYU9   A0A194QEG6   + More
A0A2A4JAE0   A0A194QK85   A0A2A3E7S0   A0A2J7PPD0   A0A2J7PP91   A0A195DTM8   A0A195EX96   A0A232F338   A0A026X0I2   E9IS54   A0A151I7D5   A0A2J7PPA8   A0A2J7PPA5   A0A195BKG1   V9ILS0   A0A0L7RDP0   A0A154PID6   E2AGE1   A0A0J7L7Z5   A0A151XGV3   A0A310S967   A0A2R7WXI0   E2BQJ7   A0A158P1D2   A0A1B6DR86   A0A1B6C6G8   A0A1Y1JX35   A0A2M4ACZ0   A0A146LH07   A0A0M8ZN15   V5H1R4   U4UBD3   T1IGD1   T1IVT4   A0A0P5X4J4   A0A0P4ZNJ3   A0A0P5BSZ4   A0A0P5ULS4   V5IIB5   A0A023G3A6   A0A0P4WBB6   A0A087ZWN6   A0A0P5BJS5   A0A0P5BPJ1   A0A0N8A4R9  

Pubmed

19121390    28756777    22118469    26354079    28648823    24508170    + More
21282665    20798317    21347285    28004739    26823975    23537049    25765539   

EMBL

BABH01023471    KZ149993    PZC75522.1    ODYU01010779    SOQ56092.1    RSAL01000211    + More
RVE44207.1    AGBW02011440    OWR46660.1    KQ459185    KPJ03340.1    NWSH01002337    PCG68494.1    KQ461198    KPJ05947.1    KZ288354    PBC27266.1    NEVH01023278    PNF18166.1    PNF18164.1    KQ980390    KYN16260.1    KQ981928    KYN32848.1    NNAY01001098    OXU25141.1    KK107046    EZA61782.1    GL765283    EFZ16673.1    KQ978415    KYM94072.1    PNF18168.1    PNF18165.1    KQ976449    KYM85813.1    JR050390    AEY61264.1    KQ414612    KOC69107.1    KQ434924    KZC11567.1    GL439310    EFN67474.1    LBMM01000307    KMR01438.1    KQ982138    KYQ59626.1    KQ763442    OAD55090.1    KK855863    PTY24171.1    GL449769    EFN82055.1    ADTU01006307    ADTU01006308    ADTU01006309    ADTU01006310    ADTU01006311    ADTU01006312    ADTU01006313    ADTU01006314    ADTU01006315    GEDC01009129    JAS28169.1    GEDC01028468    JAS08830.1    GEZM01098874    JAV53693.1    GGFK01005335    MBW38656.1    GDHC01019841    GDHC01016621    GDHC01011185    GDHC01003630    JAP98787.1    JAQ02008.1    JAQ07444.1    JAQ14999.1    KQ436019    KOX67565.1    GALX01001698    JAB66768.1    KB632184    ERL89643.1    ACPB03019049    JH431593    GDIP01077784    JAM25931.1    GDIP01213989    GDIP01180883    JAJ09413.1    GDIP01180884    JAJ42518.1    GDIP01128594    JAL75120.1    GANP01003477    JAB80991.1    GBBM01006737    JAC28681.1    GDRN01055674    JAI65946.1    GDIP01184038    JAJ39364.1    GDIP01182586    JAJ40816.1    GDIP01182585    JAJ40817.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000053268    UP000218220    UP000053240    + More
UP000242457    UP000235965    UP000078492    UP000078541    UP000215335    UP000053097    UP000078542    UP000078540    UP000053825    UP000076502    UP000000311    UP000036403    UP000075809    UP000008237    UP000005205    UP000053105    UP000030742    UP000015103    UP000005203   

PRIDE

H9JEQ4   

Pfam

PF03114   BAR        + More
PF14604   SH3_9
PF00018   SH3_1
PF00350   Dynamin_N
PF02212   GED
PF00169   PH
PF01031   Dynamin_M

Interpro

IPR036028   SH3-like_dom_sf        + More
IPR004148   BAR_dom       
IPR027267   AH/BAR_dom_sf       
IPR003005   Amphiphysin       
IPR001452   SH3_domain       
IPR001611   Leu-rich_rpt       
IPR032675   LRR_dom_sf       
IPR003603   U2A'_phosphoprotein32A_C       
IPR003130   GED       
IPR027417   P-loop_NTPase       
IPR001849   PH_domain       
IPR030381   G_DYNAMIN_dom       
IPR011993   PH-like_dom_sf       
IPR019762   Dynamin_GTPase_CS       
IPR001401   Dynamin_GTPase       
IPR027741   DNM1       
IPR000375   Dynamin_central       
IPR020850   GED_dom       
IPR022812   Dynamin_SF       

SUPFAM

SSF50044   SSF50044        + More
SSF103657   SSF103657       
SSF52540   SSF52540       

Gene 3D

1.20.1270.60     3.80.10.10     2.30.29.30    

CDD

cd08771  DLP_1

ProteinModelPortal

H9JEQ4   A0A2W1BKB7   A0A2H1WSY5   A0A3S2NNB4   A0A212EYU9   A0A194QEG6   + More
A0A2A4JAE0   A0A194QK85   A0A2A3E7S0   A0A2J7PPD0   A0A2J7PP91   A0A195DTM8   A0A195EX96   A0A232F338   A0A026X0I2   E9IS54   A0A151I7D5   A0A2J7PPA8   A0A2J7PPA5   A0A195BKG1   V9ILS0   A0A0L7RDP0   A0A154PID6   E2AGE1   A0A0J7L7Z5   A0A151XGV3   A0A310S967   A0A2R7WXI0   E2BQJ7   A0A158P1D2   A0A1B6DR86   A0A1B6C6G8   A0A1Y1JX35   A0A2M4ACZ0   A0A146LH07   A0A0M8ZN15   V5H1R4   U4UBD3   T1IGD1   T1IVT4   A0A0P5X4J4   A0A0P4ZNJ3   A0A0P5BSZ4   A0A0P5ULS4   V5IIB5   A0A023G3A6   A0A0P4WBB6   A0A087ZWN6   A0A0P5BJS5   A0A0P5BPJ1   A0A0N8A4R9  

PDB

1URU     E-value=2.90022e-66,     Score=640

KEGG

101740393    K12562 amphiphysin | (RefSeq) myc box-dependent-interacting protein 1

PATHWAY

04144    Endocytosis - Bombyx mori (domestic silkworm)

GO

GO:0005737   GO:0016021   GO:0003924   GO:0005525   GO:0005515   GO:0006810   GO:0006508   GO:0015074   GO:0007166   GO:0006032   GO:0016742   GO:0003824  

PANTHER

PTHR11566   PTHR11566:SF32  

Length:

412

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.10418

Exp number, first 60 AAs:

0.00011

Total prob of N-in:

0.00734

outside

1  -  412

 

 

Pi

204.799771

Theta

194.282516

Tajima's D

0.103502

CLR

158.383989

CSRT

0.394630268486576

Interpretation

Uncertain