Gene

KWMTBOMO04929

Pre Gene Modal

BGIBMGA013783

Annotation

AF461149_1_transposase_[Bombyx_mori]

Location

Bomo_Chr9(+):1861345-1862582      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.576

CDS

ATGGAGTGGACGCTTAAAGAAGACCGTGTTGCAGTTATTGCGTGGCATCGTTGCGGTTACGCGCCAATTCAAATTTTTAACATACTGAAAAATTTGAATATAACCAAAAGATTCGTTTATCGTACCATCAAACGATACAATGAAGACTCTAGTGTAGATGACAGGTCAAGAAGTGGTCGCCCTCGGTCTGTTAGGACTCCAGCAGTGATAAAAGCTGTGAAGGCGCGAATTCAAAGAAATCCCAAACGTAAGCAGAAACTGTTGGTCCTTCAGTTGGGGTTAAGCAGAACCACGATGAAAAGGGTGTTAAATGAAGACTTAGGGCTTCGGGCATATCGAAGAAAAACAGGACATCGTTTGAATGCTCGTCTAATGGACTTGAGACTGAAGAGATGCCGCGCTTTGTTGAAGCGGTACGCGGGAAAAAAATATCGGGAAATTCTTTTTTCGGATGAAAATTTTTTTACCGTAGAAGAGAGCTACTACAAACAAAATGATAAGGTGTACGCACACAGTAGTGAAGAAGCGAGCAACCGTATTCCGCGTGTCCAACGAGGTTATTTTCCATCCTCGCTCATGGTATGGTTGGGAGTTTCTTATTGGGGCTTAACAGAGGTACAGTTTTGTGAGAAAGGTGTAAAAACGAATGCAGTTGTGTATCAAAATACAGTCCTGACGAACCTTGTGGAACCTGTTTCTCATACCATGTTCAATAACAGGCACTGGGTATTCCAACAAGATTCGGCGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCGTGAAATCGACTTCATCCGGCACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAACACTCGGAGGAAAAGGCGTGCTCAAAGCTTCATCCCAATTTGGAGTCACTCAAGACATCCTTGATTAAGGCAGCCGCCGATATTGACATGGACCTCGTTCGTGCTGCGATAGACGACTGGCCGCGCAGATTGAAGGCCTGTATTCAAAATCACGGAGATCATTTTGAATAA

Protein

MEWTLKEDRVAVIAWHRCGYAPIQIFNILKNLNITKRFVYRTIKRYNEDSSVDDRSRSGRPRSVRTPAVIKAVKARIQRNPKRKQKLLVLQLGLSRTTMKRVLNEDLGLRAYRRKTGHRLNARLMDLRLKRCRALLKRYAGKKYREILFSDENFFTVEESYYKQNDKVYAHSSEEASNRIPRVQRGYFPSSLMVWLGVSYWGLTEVQFCEKGVKTNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHSEEKACSKLHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHGDHFE

Similarity

Belongs to the TGF-beta family.

Uniprot

Q8ITJ9   B1Q3L9   B1Q3L5   B1Q3L8   B9A8E5   A0A3S2LTJ6   + More
A0A3S2NF68   A0A3S2M6X4   P90693   G3G3K1   A0A3S2LXK8   A0A3S2M6Z0   A0A3S2LQG1   A0A3S2LWW4   A0A226D9B6   A0A016VJ32   A0A016WN34   W6NUW0   A0A0N4XXA5   A0A016WY15   A0A1I7T5D4   A0A016TV39   A0A1I7SJQ8   E3NDP6   A0A2G5T9N6   E3NJL6   A0A2G5SZY0   A0A1L5BY18   H3E4E9   E3N1H1   E3M1J2   A0A016WKB6   A0A368FVD9   E3NHD7   E3MQK2   E3MXK7   A0A2G5SF52   E3N4H8   A0A016S0M1   A0A1I8CC25   A0A368H7I1   A0A016W3L5   A0A2H2I0K4   A0A2G5VIT1   A0A2G5TN79   H3ESY7   E3N749   A0A183G443   A0A3P8B6H1   H3EE07   A0A0C2GWR6   H3EXA9   H3DS69   A0A2G5TZM3   A0A2G5TSG2   A0A183FUJ2   A0A3P8A0U6   H3E1D2   H3DZR2   A0A1I7RU52   A0A1I7SRX5   H3FLR7   E3NHK7   E3M897   A0A016S9F8   H3FF09   A0A0N4Y502   A0A0N4XTP7   H3FES1   E3ND45   A0A2G5TZ20   H3FB13   A0A2G5VPS7   A0A0K9NHE3   A0A3P8RL19   E3N6E8   A0A3P8S822   G2J6Z9  

Pubmed

12653938    9014339    25730766    21909270    25527032    18806794    + More
26829753    26814964    14624247   

EMBL

AF461149    AAN06610.1    AB363028    BAG15927.1    AB363006    AB363010    + More
AB363014    BAG15923.1    BAG15924.1    AB363018    BAG15926.1    AB473770    BAH20555.1    RSAL01000012    RVE53510.1    RSAL01000063    RVE49524.1    RSAL01000022    RVE52367.1    U47917    AAB47739.1    JF779677    AEO90418.1    RSAL01000133    RVE46339.1    RSAL01000021    RVE52408.1    RSAL01000470    RVE41612.1    RSAL01000140    RVE46091.1    LNIX01000030    OXA41211.1    JARK01001345    EYC27589.1    JARK01000176    EYC41234.1    CAVP010059404    CDL95787.1    UYSL01019905    VDL71189.1    JARK01000059    EYC44525.1    JARK01001411    EYC06502.1    DS268612    EFO94085.1    PDUG01000005    PIC23776.1    DS268747    EFP00909.1    PDUG01000006    PIC20538.1    KX931010    APL98300.1    DS268508    EFO83264.1    DS268421    EFO88618.1    JARK01000255    EYC39473.1    JOJR01000583    RCN36166.1    DS268673    EFO98001.1    DS268466    EFP06959.1    DS268492    EFP11689.1    PDUG01000012    PIC13506.1    DS268525    EFO85497.1    JARK01001658    EYB84158.1    JOJR01000015    RCN51257.1    JARK01001337    EYC34439.1    PDUG01000001    PIC51673.1    PIC28734.1    DS268545    EFO88382.1    UZAH01029309    VDP05368.1    KN728607    KIH63514.1    PDUG01000004    PIC32571.1    PIC29926.1    UZAH01027257    VDO90094.1    DS268679    EFO98285.1    DS268428    EFO94379.1    JARK01001601    EYB87313.1    UYSL01020440    VDL74616.1    UYSL01019770    VDL69590.1    DS268606    EFO93488.1    PIC32570.1    PIC53815.1    LFYR01002220    KMZ56176.1    DS268539    EFO88027.1    HE601047    HE600964    CAS00660.1    CAS01013.1   

Proteomes

UP000283053    UP000198287    UP000024635    UP000025227    UP000038043    UP000271162    + More
UP000095282    UP000095284    UP000008281    UP000230233    UP000005239    UP000252519    UP000095286    UP000005237    UP000050761    UP000036987    UP000265080    UP000008549   

PRIDE

Q8ITJ9    B1Q3L9    B1Q3L5    B1Q3L8    P90693   

Pfam

PF00019   TGF_beta        + More
PF16095   COR
PF00069   Pkinase
PF13358   DDE_3
PF00292   PAX
PF10320   7TM_GPCR_Srsx
PF00250   Forkhead

Interpro

IPR009057   Homeobox-like_sf        + More
IPR001839   TGF-b_C       
IPR029034   Cystine-knot_cytokine       
IPR017948   TGFb_CS       
IPR015615   TGF-beta-rel       
IPR032171   COR       
IPR020859   ROC_dom       
IPR000719   Prot_kinase_dom       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR027417   P-loop_NTPase       
IPR036388   WH-like_DNA-bd_sf       
IPR038717   Tc1-like_DDE_dom       
IPR001523   Paired_dom       
IPR036906   ATPase_V1_fsu_sf       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
IPR019424   7TM_GPCR_Srsx       
IPR036390   WH_DNA-bd_sf       
IPR001766   Fork_head_dom       
IPR030456   TF_fork_head_CS_2       

SUPFAM

SSF46689   SSF46689        + More
SSF57501   SSF57501       
SSF56112   SSF56112       
SSF52540   SSF52540       
SSF50998   SSF50998       
SSF46785   SSF46785       

Gene 3D

2.10.90.10     1.10.10.10     3.40.50.10580    

CDD

cd00059  FH

ProteinModelPortal

Q8ITJ9   B1Q3L9   B1Q3L5   B1Q3L8   B9A8E5   A0A3S2LTJ6   + More
A0A3S2NF68   A0A3S2M6X4   P90693   G3G3K1   A0A3S2LXK8   A0A3S2M6Z0   A0A3S2LQG1   A0A3S2LWW4   A0A226D9B6   A0A016VJ32   A0A016WN34   W6NUW0   A0A0N4XXA5   A0A016WY15   A0A1I7T5D4   A0A016TV39   A0A1I7SJQ8   E3NDP6   A0A2G5T9N6   E3NJL6   A0A2G5SZY0   A0A1L5BY18   H3E4E9   E3N1H1   E3M1J2   A0A016WKB6   A0A368FVD9   E3NHD7   E3MQK2   E3MXK7   A0A2G5SF52   E3N4H8   A0A016S0M1   A0A1I8CC25   A0A368H7I1   A0A016W3L5   A0A2H2I0K4   A0A2G5VIT1   A0A2G5TN79   H3ESY7   E3N749   A0A183G443   A0A3P8B6H1   H3EE07   A0A0C2GWR6   H3EXA9   H3DS69   A0A2G5TZM3   A0A2G5TSG2   A0A183FUJ2   A0A3P8A0U6   H3E1D2   H3DZR2   A0A1I7RU52   A0A1I7SRX5   H3FLR7   E3NHK7   E3M897   A0A016S9F8   H3FF09   A0A0N4Y502   A0A0N4XTP7   H3FES1   E3ND45   A0A2G5TZ20   H3FB13   A0A2G5VPS7   A0A0K9NHE3   A0A3P8RL19   E3N6E8   A0A3P8S822   G2J6Z9  

PDB

5CR4     E-value=1.21807e-09,     Score=150

KEGG

101740752    no KO assigned | (RefSeq) aldo-keto reductase AKR2E4-like

GO

GO:0003677   GO:0005576   GO:0008083   GO:0006355   GO:0016021   GO:0034220   GO:0004930   GO:0003700   GO:0043565   GO:0005634   GO:0009058   GO:0030170   GO:0003870   GO:0033014   GO:0007166   GO:0006032   GO:0005515   GO:0016742   GO:0003824  

PANTHER

PTHR11848  

Subcellular location

Secreted  
Nucleus  

Length:

346

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.10141

Exp number, first 60 AAs:

0.55149

Total prob of N-in:

0.05883

outside

1  -  346

 

 

Pi

103.634343

Theta

83.392345

Tajima's D

0.450263

CLR

1.24654

CSRT

0.508874556272186

Interpretation

Uncertain