SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04927
Pre Gene Modal
BGIBMGA008005
Annotation
Uncharacterized_protein_OBRU01_26877?_partial_[Operophtera_brumata]
Location in the cell
Cytoplasmic   Reliability : 1.178 Nuclear   Reliability : 1.85
 

Sequence

CDS
ATGGCCGAGACGATGGCTTACGAACCAGCGATGGACGATGAAGTTTACGATTATGATACCACCAAAATCCCGGAGATCGTGACCCCTGACGACATGAACGAGTCCGGGTATCAGGAGGGCTCCGAGCAGAGCTACGGGGATCGCAGGGATTCCAAGGAGGGCTTCGGCGGCGAGGGCGATTCCGACAGCGGCGTGGACGGCGTGAGCAGCGGCTGCAGCACCGCGGACGACTGCCCGGTCGTGTCAATCAACGACGTGGTCGCGTACTACGATCACATCCGGCCGAGGAGGCGGCACGTGCCACAGCTCAGCTTCTACACCGTCGACATCGAGAGGATGACGCTCGAGGCTATTGCTCAGGTTGGTCTTTCATTTTCATTATCTATTTCTTTCATGTATGTAGCTGAACAAGCTTACATTCCACCTCGTGTTAATTGGCTATAG
Protein
MAETMAYEPAMDDEVYDYDTTKIPEIVTPDDMNESGYQEGSEQSYGDRRDSKEGFGGEGDSDSGVDGVSSGCSTADDCPVVSINDVVAYYDHIRPRRRHVPQLSFYTVDIERMTLEAIAQVGLSFSLSISFMYVAEQAYIPPRVNWL

Summary

Ontologies

GO

Topology

Length:
147
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
5.64713
Exp number, first 60 AAs:
0
Total prob of N-in:
0.31925
outside
1  -  147
 
 

Population Genetic Test Statistics

Pi
141.886169
Theta
142.644604
Tajima's D
-0.232081
CLR
42.833694
CSRT
0.305184740762962
Interpretation
Possibly Positive selection
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