Gene

KWMTBOMO04916

Pre Gene Modal

BGIBMGA008073

Annotation

hypothetical_protein_KGM_01342_[Danaus_plexippus]

Location

Bomo_Chr9(+):1463020-1463384      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.153 Nuclear   Reliability : 1.006

CDS

ATGCCCGTGATGCCCAGGGACATCCCGGTGGACATGAAGTACATCGCGGACCCGACGATGCACTCCCTGCCGGCCGTCACCGCCGCGCCCAACGGCAAGTGGCTCGCGTGCCAGTCCATGGACAACAAGGTCATCGTGTTCAGCGCGCTCAACCGCTTCAAGATGAACAGGAAGAAGACGTTCACCGGGCACATGGTGGCCGGGTACGCCTGCACCGTCGACTTCTCCCCGGACATGAGGTAA

Protein

MPVMPRDIPVDMKYIADPTMHSLPAVTAAPNGKWLACQSMDNKVIVFSALNRFKMNRKKTFTGHMVAGYACTVDFSPDMR

Uniprot

H9JEX6   A0A2J7R200   A0A1B0DFE9   A0A224XDZ3   A0A023F4L3   A0A232FIR0   + More
K7J197   N6TSG8   U4TXH7   A0A1L8DG53   A0A195CJ25   A0A310SQC6   A0A1J1J2U2   A0A2R7X4G2   A0A1A9XN20   A0A0L7RDQ3   A0A1I8NU20   E0VQD0   A0A1A9ZZP9   A0A154PB20   A0A1B0FRH7   A0A3L8DQ43   A0A195F2I9   A0A158NFU1   A0A195E6W1   A0A026WYQ6   F4X6R4   A0A151XC95   A0A0J7KS73   A0A195B2R1   E2ACA9   A0A0P4WTK3   A0A0P5KBL1   A0A2P6L0K4   A0A226D9P0   A0A162EE21   A0A194QK57   A0A194QIS7   V5GIC3   A0A0P5G7C8   A0A2G9RUK5   A0A2A4JPL1   A0A0B6ZXN2   A0A069DYH3   A0A087UVE6   K1QLM6   A0A1W4X2G2   A0A1Y1N8F7   A0A2R9CDQ9   K9KCK8   A0A1E1WKN5   A0A2R9CDR7   A0A2I3TNU2   G8F2I8   A0A0G2JW64   A0A094L6E0   A0A2C9K688   A0A093QN90   A0A2P4T741   A0A091SQY4   A0A3Q3SUV7   A0A093IMA9   T1JN96   D6X3W5   A0A0T6AUB0   A0A034VRU3   A0A0V0GCK5   A0A3Q1EQA8   A0A2I2V1E3   A0A3S1AGN9   F7CR49   A0A3Q1B0G7   A0A3P8S795   A0A3B5A626   A0A2K5Z5N2   A0A2I3H9S3   A0A067RLH9   A0A341B3G8   A0A226NTM2   A0A2I3T8T6   Q5SRN1   M1EIH2   A0A093DWF8   A0A2K6BF43   A0A2K5TZC3   A0A2K5Z5S4   A0A096NFM5   A0A2K5KF60   A0A182T3I1   A0A2K6JP06   A0A2K6P181   A0A2K5C2C0   H2PK17   A0A2J8U1H4   A0A2K5PDT0   M7CBG4   A0A182QRA8   A0A2I3MLP9   A0A182K1F3   U3K871  

Pubmed

19121390    25474469    28648823    20075255    23537049    20566863    + More
30249741    21347285    24508170    21719571    20798317    26354079    26334808    22992520    28004739    22722832    16136131    22002653    15057822    15562597    18362917    19820115    25348373    17975172    24845553    24621616    14574404    18669648    19690332    20068231    21406692    23186163    24275569    23236062    25362486    23624526   

EMBL

BABH01023427    NEVH01008202    PNF34866.1    AJVK01058702    GFTR01007222    JAW09204.1    + More
GBBI01002465    JAC16247.1    NNAY01000140    OXU30626.1    APGK01057068    KB741277    ENN71276.1    KB631617    ERL84703.1    GFDF01008770    JAV05314.1    KQ977754    KYN00069.1    KQ761768    OAD57125.1    CVRI01000067    CRL06687.1    KK856889    PTY26531.1    KQ414613    KOC68925.1    DS235418    EEB15586.1    KQ434864    KZC09031.1    CCAG010008016    QOIP01000005    RLU22353.1    KQ981864    KYN34304.1    ADTU01014740    KQ979568    KYN20831.1    KK107063    EZA61175.1    GL888818    EGI57846.1    KQ982314    KYQ57967.1    LBMM01003834    KMQ93069.1    KQ976662    KYM78489.1    GL438491    EFN68899.1    GDRN01007567    JAI67946.1    GDIQ01186460    JAK65265.1    MWRG01002896    PRD32117.1    LNIX01000028    OXA41860.1    LRGB01002011    KZS09650.1    KQ461198    KPJ05958.1    KQ459185    KPJ03356.1    GALX01007084    JAB61382.1    GDIQ01246234    JAK05491.1    KV931317    PIO31589.1    NWSH01000969    PCG73352.1    HACG01025751    CEK72616.1    GBGD01002350    JAC86539.1    KK121841    KFM81335.1    JH817213    EKC34793.1    GEZM01010125    JAV94181.1    AJFE02016426    AJFE02016427    AJFE02016428    AJFE02016429    JL621568    AEP99484.1    GDQN01003628    JAT87426.1    AACZ04054326    JH330059    EHH61502.1    AABR07045469    AABR07045470    AABR07045471    AABR07045472    KL278156    KFZ66933.1    KL419269    KFW87855.1    PPHD01006509    POI32166.1    KK483166    KFQ61127.1    KK592048    KFW00762.1    JH431704    KQ971379    EEZ97476.1    LJIG01022834    KRT78475.1    GAKP01014699    JAC44253.1    GECL01000528    JAP05596.1    AANG04003966    RQTK01000009    RUS91544.1    ADFV01164853    ADFV01164854    ADFV01164855    ADFV01164856    KK852438    KDR23898.1    AWGT02001832    OXB70419.1    NBAG03000210    PNI87629.1    AL445068    AL671518    JP007299    AER95896.1    KL232255    KFV06501.1    AQIA01049409    AHZZ02025974    ABGA01320989    ABGA01320990    ABGA01320991    ABGA01320992    ABGA01320993    NDHI03003476    PNJ39113.1    KB520915    EMP38047.1    AXCN02002066    AGTO01010121   

Proteomes

UP000005204    UP000235965    UP000092462    UP000215335    UP000002358    UP000019118    + More
UP000030742    UP000078542    UP000183832    UP000092443    UP000053825    UP000095300    UP000009046    UP000092445    UP000076502    UP000092444    UP000279307    UP000078541    UP000005205    UP000078492    UP000053097    UP000007755    UP000075809    UP000036403    UP000078540    UP000000311    UP000198287    UP000076858    UP000053240    UP000053268    UP000218220    UP000054359    UP000005408    UP000192223    UP000240080    UP000002277    UP000009130    UP000002494    UP000076420    UP000261640    UP000007266    UP000257200    UP000011712    UP000271974    UP000008225    UP000257160    UP000265080    UP000261400    UP000233140    UP000001073    UP000027135    UP000252040    UP000198419    UP000005640    UP000233120    UP000233100    UP000028761    UP000233080    UP000075901    UP000233180    UP000233200    UP000233020    UP000001595    UP000233040    UP000031443    UP000075886    UP000075881    UP000016665   

PRIDE

H9JEX6    Q5SRN1   

Pfam

PF00400   WD40        + More
PF06991   MFAP1
PF04427   Brix

Interpro

IPR019775   WD40_repeat_CS        + More
IPR036322   WD40_repeat_dom_sf       
IPR032847   PRPF17       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR020472   G-protein_beta_WD-40_rep       
IPR009730   MFAP1_C       
IPR007109   Brix       

SUPFAM

SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9JEX6   A0A2J7R200   A0A1B0DFE9   A0A224XDZ3   A0A023F4L3   A0A232FIR0   + More
K7J197   N6TSG8   U4TXH7   A0A1L8DG53   A0A195CJ25   A0A310SQC6   A0A1J1J2U2   A0A2R7X4G2   A0A1A9XN20   A0A0L7RDQ3   A0A1I8NU20   E0VQD0   A0A1A9ZZP9   A0A154PB20   A0A1B0FRH7   A0A3L8DQ43   A0A195F2I9   A0A158NFU1   A0A195E6W1   A0A026WYQ6   F4X6R4   A0A151XC95   A0A0J7KS73   A0A195B2R1   E2ACA9   A0A0P4WTK3   A0A0P5KBL1   A0A2P6L0K4   A0A226D9P0   A0A162EE21   A0A194QK57   A0A194QIS7   V5GIC3   A0A0P5G7C8   A0A2G9RUK5   A0A2A4JPL1   A0A0B6ZXN2   A0A069DYH3   A0A087UVE6   K1QLM6   A0A1W4X2G2   A0A1Y1N8F7   A0A2R9CDQ9   K9KCK8   A0A1E1WKN5   A0A2R9CDR7   A0A2I3TNU2   G8F2I8   A0A0G2JW64   A0A094L6E0   A0A2C9K688   A0A093QN90   A0A2P4T741   A0A091SQY4   A0A3Q3SUV7   A0A093IMA9   T1JN96   D6X3W5   A0A0T6AUB0   A0A034VRU3   A0A0V0GCK5   A0A3Q1EQA8   A0A2I2V1E3   A0A3S1AGN9   F7CR49   A0A3Q1B0G7   A0A3P8S795   A0A3B5A626   A0A2K5Z5N2   A0A2I3H9S3   A0A067RLH9   A0A341B3G8   A0A226NTM2   A0A2I3T8T6   Q5SRN1   M1EIH2   A0A093DWF8   A0A2K6BF43   A0A2K5TZC3   A0A2K5Z5S4   A0A096NFM5   A0A2K5KF60   A0A182T3I1   A0A2K6JP06   A0A2K6P181   A0A2K5C2C0   H2PK17   A0A2J8U1H4   A0A2K5PDT0   M7CBG4   A0A182QRA8   A0A2I3MLP9   A0A182K1F3   U3K871  

PDB

6QDV     E-value=1.9534e-32,     Score=341

KEGG

101738430    K12816 pre-mRNA-processing factor 17 | (RefSeq) pre-mRNA-processing factor 17

PATHWAY

03040    Spliceosome - Bombyx mori (domestic silkworm)

GO

GO:0071013   GO:0000398   GO:0016021   GO:0005634   GO:0051301   GO:0071007   GO:0016607   GO:0005515   GO:0033180   GO:0046961   GO:0033179   GO:0015074   GO:0007166   GO:0006032   GO:0016742   GO:0003824  

PANTHER

PTHR43979  

Length:

80

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.30905

Exp number, first 60 AAs:

0.06983

Total prob of N-in:

0.16049

outside

1  -  80

 

 

Pi

4.40602

Theta

9.574168

Tajima's D

-1.579898

CLR

90.63788

CSRT

0.0471476426178691

Interpretation

Uncertain