SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04913  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008072
Annotation
PREDICTED:_carbonic_anhydrase_7_[Plutella_xylostella]
Location in the cell
PlasmaMembrane   Reliability : 2.036
 

Sequence

CDS
ATGAAGTACTTTGGTATTATAGCTGTATTCACCCTGGTGGTTATTAATGTATCTGTGGCAGCAGGATGGGGATATCGGGCCTCCGACCAGAGACGTTGGGCGGTACTGCACCCTGCTTGTGGCGGCCGTCAGCAGTCTCCCATAGCGATTTCAGCACGTCAAGCAATTCCTATCTCAATTCCAGCGATCGAACTCATTGGATACCAGAACCCTCTTCCTGGACCTTTAACGATCACTAATACGGGACATTCAGTGGCATTGACAATCCCCAAGTACACTTCGGAAGAGGAGAAGAAAGGCTTCCGTCTACCTTACATCTTTGGAGGTCCCCTAGACAACGAGTATGAGATCGATGGTCTGCATTTCCACTGGGGTGACAAGAACAACAGAGGATCGGAGCACACATTGAACGATATGCGTCTTCCTTTGGAAATGCACATCATCCATAGGAATAAGAAATACAGAAACACCGCGGAAGCTATGCAGCACCCTGATGGCCTATGTGTGCTCGCGTTCTTCTATCAGGTTGTGGAATTCGATGCCAAGCTCTTAAGTCCTATCGTGAAGAACCTAACGGCCATCGAGAACTTCAACTCCACTCTGCAGCTGCCGCATACTTTCTCCTTGTCGTCAATCCTGTCTGGCTTGGACACTGAAAGGTTCTACACGTACAAAGGATCATTGACCACTCCTCCCTGTGCTGAAGCCGTCACATGGGTGATCTTTTCTGACTACCTGCCCATTTCCGTGTTTCAAATGGATAATTTCCGTGGTCTTCTTTCCAATCTCAATTTGCCATTAGTTGATAACTTCAGGCAGTTACAACCGTTGTTTGGTCGCCGTGTCTTCGTCAGAATCACATCAAAGAACCCTAAGTTCAAGAAGACCAAACTCCACTACTCCAAATGGGACTGGGTTGGACACAAGAAGTCCGAAAATGACGTCATCGACTTCGATGAATAA
Protein
MKYFGIIAVFTLVVINVSVAAGWGYRASDQRRWAVLHPACGGRQQSPIAISARQAIPISIPAIELIGYQNPLPGPLTITNTGHSVALTIPKYTSEEEKKGFRLPYIFGGPLDNEYEIDGLHFHWGDKNNRGSEHTLNDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLSPIVKNLTAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNLNLPLVDNFRQLQPLFGRRVFVRITSKNPKFKKTKLHYSKWDWVGHKKSENDVIDFDE

Summary

Similarity
Belongs to the alpha-carbonic anhydrase family.
EMBL
BABH01023425    BABH01023426    BABH01023427    RSAL01000211    RVE44197.1    NWSH01000969    + More
PCG73355.1    KZ150199    PZC72287.1    AGBW02009996    OWR49379.1    KQ459185    KPJ03358.1    ODYU01006897    SOQ49160.1    KQ461198    KPJ05960.1    JTDY01011745    KOB53514.1    JTDY01000482    KOB76979.1    PCG73354.1    GGFK01002290    MBW35611.1    GGFK01002270    MBW35591.1    AJVK01010815    GGFJ01007434    MBW56575.1    ADMH02002181    ETN58014.1    GGFJ01007532    MBW56673.1    GGFJ01007533    MBW56674.1    GGFM01001212    MBW21963.1    ATLV01014774    KE524988    KFB39570.1    GGFM01001214    MBW21965.1    AXCN02000083    AXCM01001920    AAAB01008794    EAA03529.3    GAPW01002748    GAPW01002747    GAPW01002745    JAC10851.1    APCN01002159    GANO01003132    JAB56739.1    CH477536    EAT39369.1    GAPW01002746    JAC10852.1    DQ518577    ABF66619.1    JXUM01035638    JXUM01035639    KQ561068    KXJ79806.1    GGFM01006336    MBW27087.1    GDHF01003464    JAI48850.1    GAKP01006856    JAC52096.1    GAMC01020186    GAMC01020185    JAB86370.1    GDHF01026797    JAI25517.1    GAKP01006855    JAC52097.1    JRES01001712    KNC20579.1    CP012526    ALC45584.1    CM000070    EAL27418.1    GAMC01020189    GAMC01020187    JAB86368.1    KA647735    AFP62364.1    CH902623    EDV30413.1    CM000364    EDX14630.1    CH480828    EDW45199.1    GFDG01001072    JAV17727.1    CH933806    EDW14528.1    AE014297    AAF56666.2    CH940650    EDW67420.1    BT132983    AEX31653.1    CH954182    EDV53462.1    CH916369    EDV92783.1    CCAG010001934    CM000160    EDW98546.1    BT012344    AAS77469.1    CH964232    EDW81389.1    CVRI01000001    CRK86501.1    JXJN01007759    GGFM01001890    MBW22641.1    CH479179    EDW24004.1    GDHF01022175    JAI30139.1    GEDC01020082    GEDC01006389    GEDC01001615    JAS17216.1    JAS30909.1    JAS35683.1    GECU01013409    JAS94297.1    GEBQ01016218    JAT23759.1    GECZ01003489    JAS66280.1    GBYB01000706    JAG70473.1    KQ435911    KOX68932.1    GFTR01004604    JAW11822.1    KZ288226    PBC31868.1    OUUW01000005    SPP80564.1    LJIG01022703    KRT79149.1    QOIP01000004    RLU23356.1    GBHO01018343    GBHO01018342    GBHO01018341    GBHO01013756    GBHO01013755    GBHO01008619    GBHO01008618    GBHO01008616    GBHO01008615    GBHO01008611    GBRD01012103    GBRD01010966    GBRD01010964    GBRD01010963    GDHC01018896    GDHC01014892    GDHC01013354    JAG25261.1    JAG25262.1    JAG25263.1    JAG29848.1    JAG29849.1    JAG34985.1    JAG34986.1    JAG34988.1    JAG34989.1    JAG34993.1    JAG53721.1    JAP99732.1    JAQ03737.1    JAQ05275.1    GBBI01004136    JAC14576.1    KQ435207    KZC15078.1    KQ769179    OAD52958.1    PYGN01001954    PSN32015.1    MF189029    AWI63383.1   
Pfam
PF00194   Carb_anhydrase        + More
PF03098   An_peroxidase
PF13520   AA_permease_2
Interpro
IPR036398   CA_dom_sf        + More
IPR001148   CA_dom       
IPR023561   Carbonic_anhydrase_a-class       
IPR018338   Carbonic_anhydrase_a-class_CS       
IPR019791   Haem_peroxidase_animal       
IPR037120   Haem_peroxidase_sf_animal       
IPR010255   Haem_peroxidase_sf       
IPR002293   AA/rel_permease1       
SUPFAM
SSF51069   SSF51069        + More
SSF48113   SSF48113       
Gene 3D
PDB
6H38     E-value=6.33314e-35,     Score=368

Ontologies

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.905646
 
 
Length:
320
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.85102
Exp number, first 60 AAs:
21.55849
Total prob of N-in:
0.63103
POSSIBLE N-term signal
sequence
inside
1  -  2
TMhelix
3  -  25
outside
26  -  320
 
 

Population Genetic Test Statistics

Pi
187.383642
Theta
17.648133
Tajima's D
-0.841232
CLR
1.312311
CSRT
0.165641717914104
Interpretation
Uncertain
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