Gene

KWMTBOMO04879

Pre Gene Modal

BGIBMGA008052

Annotation

PREDICTED:_nuclear_envelope_integral_membrane_protein_1a_[Papilio_xuthus]

Location

Bomo_Chr9(+):766266-773275      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.924

CDS

ATGATTAGTGAATTAAGGATATCGGTGTTGTTAATGCTTCTATTATCAGAAGCGTCTTCTTTACCTTACGACATTCATTGGTTAGGCGGACCGACCACAATTGAAAGGGAAATACCATCTTCGAAAAAGGCTATCGACATCTACTGTTATACTGGTACAACAAAAAGTTTATTTGCACTCTGGCAAACTGTGAAATTTCAAATAAGAATTAAAAATGATGAATTTCGTCAATACCTTGGCTCAAATCCAGAAGATGTTTATAAAGAGTATACAAAAGATAGCTACGGTTGGTCTGTTGTTAATCCGTTCATTAAGAAATCACAGAAAACTGTTTCCATCAACTTGTTTGAGCCAACATGCATGGCCATTAACACTAAAGAAAGACATAGTATTGACCTGCTGGTGCAAAGGGTGGATCTATGGCGCGTCATACTAATGGCTGCTGGCATAGCACTCATCTTCTCTTCAAAGTCTCTGAGCGGTAACCCCGTGTTCTTCTACTTGTGTGGGATCTTCATTGGCGTCTTTGCATCATTTATGGTTTTAATGTATTACATCAGCAAAATGCTGCCTAAGCGCACATTAACTTATGGCCTCCTCATTGGTGGCTGGACTGTTGGTGTGTATCTATTCCAACAAATGTGGGAGAACATTCAAACATTAGCTGTGGATCACCGGAATTATGTGATCTGGTACACGTTGGCAGTCAGCTTCATCAGTTTCTTAGTTTGCTACAGGATAGGTCCACCGAGGAATCAACGAAGCAAGAACATTGTAATGTGGACAATACAGTGCGTCGGAGTGCTGATGATATTCTTTAGCAGCGAGTACCAGGAAGCTTCAGCGGCCATCATCATAGCTTCGATGATCATTAAGTATTTCCCGGAGTCGTGGGTATACAGAATACGAGGATATTGGCGCAGCAAGTTCCCCCCGGCGCGGCGCCTGCTCACCAGCGAGGAGTACTACGAGCAGGGAGCGCGCGAGACGCGGCGCGCGCTGGCGGCGCTGCGGGAGCACTGCGCCAGCCCCGACTGCGCGCAGTGGGCCGTCATGCTCAAACTTAACGACTCCAAGAGATTCGCAAGTTTCGTGGAGGGGAATTCGCACCTCAGCGACGACGAGATCCTGGACTACGAGTCCTACGCGTTCTCCCTGGACCGGAGCCGCAAGCCCAGCTCGCACTCCACCAGGAACCAGCTCGAGATATCTGACGACGACGACCTCACCGACAGCGACGACGACTCCGCGTAG

Protein

MISELRISVLLMLLLSEASSLPYDIHWLGGPTTIEREIPSSKKAIDIYCYTGTTKSLFALWQTVKFQIRIKNDEFRQYLGSNPEDVYKEYTKDSYGWSVVNPFIKKSQKTVSINLFEPTCMAINTKERHSIDLLVQRVDLWRVILMAAGIALIFSSKSLSGNPVFFYLCGIFIGVFASFMVLMYYISKMLPKRTLTYGLLIGGWTVGVYLFQQMWENIQTLAVDHRNYVIWYTLAVSFISFLVCYRIGPPRNQRSKNIVMWTIQCVGVLMIFFSSEYQEASAAIIIASMIIKYFPESWVYRIRGYWRSKFPPARRLLTSEEYYEQGARETRRALAALREHCASPDCAQWAVMLKLNDSKRFASFVEGNSHLSDDEILDYESYAFSLDRSRKPSSHSTRNQLEISDDDDLTDSDDDSA

Similarity

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.

Uniprot

H9JEV5   A0A2H1VVU7   A0A2W1BME9   A0A194QD44   A0A194QKR1   A0A212EJR3   + More
D6WCX2   A0A1W7R4V9   U5EQP6   A0A067RJR7   B0WSD1   A0A182GE98   A0A1B0D4C7   A0A0L0C0G0   A0A2J7QF68   A0A1Y1KIZ8   N6U565   U4UDI7   A0A1L8D9A1   Q16L76   A0A1S4G4N1   Q1DH09   A0A1I8Q0M6   A0A1Q3F4F4   A0A1Q3F5N7   A0A0L7KSX5   A0A336M6Z1   A0A1A9YDC7   A0A1B0B045   B4L8J9   A0A1I8MUB5   B4F668   B4M1Y0   A0A1A9VC14   B4F666   B4NES7   B4F667   A0A1B0A3I9   C0MM50   C0MM52   B4F677   B4PXV9   B4R605   B4F672   Q9VXD6   C0MM51   A0A1B0CA28   B3NVK3   A0A1W4VVM8   B4GV93   C0MM57   D1GYY0   W8BP99   B3MW98   D1GYX6   D1GYY1   D1GYY2   D1GYX9   D1GZ13   D1GYY5   A0A0K8UH58   A0A1B0A594   D1GYX8   A0A1B0G429   A0A0A1XHF4   D1GZ41   B4IEQ8   A0A3B0JYW3   B5DLI4   B4JLT1   A0A0A9WCK4   A0A0M3QZ18   T1HEX7   A0A1A9WII1   B5DLI2   A0A182RJY2   A0A1B6C6W0   A0A182TIX2   A0A182XNV1   A0A182Y0F7   A0A182I7F6   E0VB39   A0NGE1   A0A1A9X553   A0A1S4GZQ7   A0A182V0I1   W5JDD3   A0A182F1L8   A0A2M4BPR0   A0A1J1HJI0   A0A182JWV4   A0A182WG98   A0A026WDX8   A0A182LMN2   A0A182QJB5   A0A1Z5LGB7  

Pubmed

19121390    28756777    26354079    22118469    18362917    19820115    + More
24845553    26483478    26108605    28004739    23537049    17510324    26227816    17994087    25315136    18477586    19126864    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24495485    18057021    25830018    15632085    25401762    26823975    25244985    20566863    12364791    20920257    23761445    24508170    30249741    20966253    28528879   

EMBL

BABH01023375    ODYU01004706    SOQ44876.1    KZ149969    PZC76108.1    KQ459185    + More
KPJ03382.1    KQ461198    KPJ05984.1    AGBW02014406    OWR41729.1    KQ971311    EEZ98828.1    GEHC01001454    JAV46191.1    GANO01004162    JAB55709.1    KK852427    KDR24091.1    DS232068    EDS33769.1    JXUM01057463    KQ561956    KXJ77058.1    AJVK01011357    JRES01001072    KNC25746.1    NEVH01015302    PNF27193.1    GEZM01087327    JAV58767.1    APGK01042240    KB741002    ENN75781.1    KB632309    ERL92039.1    GFDF01011157    JAV02927.1    CH477918    EAT35075.1    CH899885    EAT32440.1    GFDL01012600    JAV22445.1    GFDL01012178    JAV22867.1    JTDY01006204    KOB66200.1    UFQS01000642    UFQT01000642    SSX05677.1    SSX26036.1    JXJN01006553    CH933815    EDW07974.1    AM999304    AM999305    AM999306    AM999307    AM999309    AM999310    AM999311    AM999312    FM246421    FM246425    FM246427    FM246430    CAQ53666.1    CAQ53667.1    CAQ53668.1    CAQ53669.1    CAQ53671.1    CAQ53672.1    CAQ53673.1    CAQ53674.1    CAR94347.1    CAR94351.1    CAR94353.1    CAR94356.1    CH940651    EDW65684.2    AM999302    CAQ53664.1    CH964239    EDW82246.2    AM999303    CAQ53665.1    FM246422    CAR94348.1    FM246424    FM246426    FM246428    CAR94350.1    CAR94352.1    CAR94354.1    AM999313    CAQ53675.1    CM000162    EDX01945.1    CM000366    EDX18109.1    AM999308    CAQ53670.1    AE014298    AY069627    AAF48638.1    AAL39772.1    FM246423    CAR94349.1    AJWK01003181    CH954180    EDV46395.1    CH479192    EDW26630.1    FM246429    CAR94355.1    FN546719    CBE67018.1    GAMC01003595    JAC02961.1    CH902625    EDV35243.2    KPU75494.1    FN546715    CBE67014.1    FN546716    FN546720    FN546723    CBE67015.1    CBE67019.1    CBE67022.1    FN546721    FN546722    CBE67020.1    CBE67021.1    FN546718    CBE67017.1    FN546752    CBE67051.1    FN546724    CBE67023.1    GDHF01026297    JAI26017.1    FN546717    CBE67016.1    CCAG010020285    GBXI01005555    GBXI01003876    JAD08737.1    JAD10416.1    FN546780    CBE67079.1    CH480832    EDW46162.1    OUUW01000003    SPP77921.1    CH379063    EDY72385.2    CH916371    EDV91692.1    GBHO01038072    GBHO01038070    GBHO01038069    GBHO01038068    GBHO01001057    GDHC01013866    JAG05532.1    JAG05534.1    JAG05535.1    JAG05536.1    JAG42547.1    JAQ04763.1    CP012528    ALC48653.1    ACPB03020693    ACPB03020694    EDY72383.2    GEDC01028066    JAS09232.1    APCN01003394    DS235021    EEB10595.1    AAAB01008984    EAU75915.2    ADMH02001861    ETN60824.1    GGFJ01005863    MBW55004.1    CVRI01000004    CRK87714.1    KK107293    QOIP01000005    EZA53234.1    RLU22573.1    AXCN02000739    GFJQ02000916    JAW06054.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000007151    UP000007266    UP000027135    + More
UP000002320    UP000069940    UP000249989    UP000092462    UP000037069    UP000235965    UP000019118    UP000030742    UP000008820    UP000095300    UP000037510    UP000092443    UP000092460    UP000009192    UP000095301    UP000008792    UP000078200    UP000007798    UP000092445    UP000002282    UP000000304    UP000000803    UP000092461    UP000008711    UP000192221    UP000008744    UP000007801    UP000092444    UP000001292    UP000268350    UP000001819    UP000001070    UP000092553    UP000015103    UP000091820    UP000075900    UP000075902    UP000076407    UP000076408    UP000075840    UP000009046    UP000007062    UP000075903    UP000000673    UP000069272    UP000183832    UP000075881    UP000075920    UP000053097    UP000279307    UP000075882    UP000075886   

PRIDE

H9JEV5    C0MM50    Q9VXD6   

Pfam

PF10225   NEMP        + More
PF16521   Myosin-VI_CBD
PF00063   Myosin_head
PF13855   LRR_8
PF16870   OxoGdeHyase_C
PF00676   E1_dh
PF02779   Transket_pyr

Interpro

IPR036259   MFS_trans_sf        + More
IPR019358   NEMP_fam       
IPR032412   Myosin-VI_CBD       
IPR036114   MYSc_Myo6       
IPR000048   IQ_motif_EF-hand-BS       
IPR027417   P-loop_NTPase       
IPR020846   MFS_dom       
IPR001609   Myosin_head_motor_dom       
IPR036961   Kinesin_motor_dom_sf       
IPR032675   LRR_dom_sf       
IPR001611   Leu-rich_rpt       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR005475   Transketolase-like_Pyr-bd       
IPR001017   DH_E1       
IPR031717   KGD_C       
IPR011603   2oxoglutarate_DH_E1       
IPR042179   KGD_C_sf       
IPR029061   THDP-binding       

SUPFAM

SSF103473   SSF103473        + More
SSF52540   SSF52540       
SSF52518   SSF52518       

Gene 3D

3.40.850.10     3.80.10.10     3.40.50.11610    

CDD

cd06174  MFS
cd01382  MYSc_Myo6

ProteinModelPortal

H9JEV5   A0A2H1VVU7   A0A2W1BME9   A0A194QD44   A0A194QKR1   A0A212EJR3   + More
D6WCX2   A0A1W7R4V9   U5EQP6   A0A067RJR7   B0WSD1   A0A182GE98   A0A1B0D4C7   A0A0L0C0G0   A0A2J7QF68   A0A1Y1KIZ8   N6U565   U4UDI7   A0A1L8D9A1   Q16L76   A0A1S4G4N1   Q1DH09   A0A1I8Q0M6   A0A1Q3F4F4   A0A1Q3F5N7   A0A0L7KSX5   A0A336M6Z1   A0A1A9YDC7   A0A1B0B045   B4L8J9   A0A1I8MUB5   B4F668   B4M1Y0   A0A1A9VC14   B4F666   B4NES7   B4F667   A0A1B0A3I9   C0MM50   C0MM52   B4F677   B4PXV9   B4R605   B4F672   Q9VXD6   C0MM51   A0A1B0CA28   B3NVK3   A0A1W4VVM8   B4GV93   C0MM57   D1GYY0   W8BP99   B3MW98   D1GYX6   D1GYY1   D1GYY2   D1GYX9   D1GZ13   D1GYY5   A0A0K8UH58   A0A1B0A594   D1GYX8   A0A1B0G429   A0A0A1XHF4   D1GZ41   B4IEQ8   A0A3B0JYW3   B5DLI4   B4JLT1   A0A0A9WCK4   A0A0M3QZ18   T1HEX7   A0A1A9WII1   B5DLI2   A0A182RJY2   A0A1B6C6W0   A0A182TIX2   A0A182XNV1   A0A182Y0F7   A0A182I7F6   E0VB39   A0NGE1   A0A1A9X553   A0A1S4GZQ7   A0A182V0I1   W5JDD3   A0A182F1L8   A0A2M4BPR0   A0A1J1HJI0   A0A182JWV4   A0A182WG98   A0A026WDX8   A0A182LMN2   A0A182QJB5   A0A1Z5LGB7  

KEGG

101736352    no KO assigned | (RefSeq) transmembrane protein 194A

GO

GO:0016021   GO:0003779   GO:0003774   GO:0005524   GO:0016459   GO:0005635   GO:0004591   GO:0006099   GO:0030976  

PANTHER

PTHR13598   PTHR23152  

SignalP

Position:   1 - 20,         Likelihood:  0.993121

 

 

Length:

417

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

119.14917

Exp number, first 60 AAs:

5.24147

Total prob of N-in:

0.80698

inside

1  -  137

TMhelix

138  -  155

outside

156  -  164

TMhelix

165  -  187

inside

188  -  193

TMhelix

194  -  213

outside

214  -  227

TMhelix

228  -  245

inside

246  -  257

TMhelix

258  -  275

outside

276  -  279

TMhelix

280  -  302

inside

303  -  417

 

 

Pi

182.990631

Theta

170.912534

Tajima's D

0.172406

CLR

0.770079

CSRT

0.416429178541073

Interpretation

Uncertain