SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04864
Pre Gene Modal
BGIBMGA008029
Annotation
PREDICTED:_probable_allantoicase_[Bombyx_mori]
Full name
Probable allantoicase       + More
Allantoicase      
Alternative Name
Allantoate amidinohydrolase
Location in the cell
Cytoplasmic   Reliability : 1.263 Extracellular   Reliability : 1.562
 

Sequence

CDS
ATGATATCGCAGTCCGCTATCGCTCTGTGCTACTGTAGTCAGTTGTGTCCATTGCTCAAGATGTTGATTCACCCACCAAGCTATACTTCGCTCAGCGAGCTGGCAAGTCACAGTGCTGGTGGAAAAGTATTATTCGCCACAGATGACTTCTTTGCAACCTGTGAAAATATGATAGCTGATGAAGAGCCAATATTCATAGCTGATAAATATACGGAGTACGGTAAATGGATGGACGGCTGGGAGACCAGACGGAAGAGGATCCCGGGACACGACTGGTGCATCATCAAGCTGGCTACCAAATGCGTCATAAAAGGATTGGTAATAGATACAGCCTTCTTCACTGGAAACAATGCTCCAAAGTTTTCAATTCAAGCAGCAACACTGACTTCAGAAGATGAAAAACTTATACCAGTCAGACATCCCACGATGGGCTCGTCATGTTCCGCCCAAGACATGGAACTGATCACCAGGATTCATTCGGATGAGTGGCAAGAGATCGTTCCTGTTACTGTGCTACGGCCGGGATATGAAGATACCAGATTCAATTATCAAAAAGTCGTAAACGATGACTCCTGGACACACATCCGAGTTAACATATATCCTGATGGTGGCATCGCCAGACTCAGAGTATTCGGCGAAGCCAAACCCGAACTTCTGGCTATTCACGATATGATAGACTTGGTGTCATTACTTAATGGAGGAATCTGTCAAGAAGCCAAACTCTCAGATGATCTGTTCAGGGAACCGCTGGAAGCCTCATAA
Protein
MISQSAIALCYCSQLCPLLKMLIHPPSYTSLSELASHSAGGKVLFATDDFFATCENMIADEEPIFIADKYTEYGKWMDGWETRRKRIPGHDWCIIKLATKCVIKGLVIDTAFFTGNNAPKFSIQAATLTSEDEKLIPVRHPTMGSSCSAQDMELITRIHSDEWQEIVPVTVLRPGYEDTRFNYQKVVNDDSWTHIRVNIYPDGGIARLRVFGEAKPELLAIHDMIDLVSLLNGGICQEAKLSDDLFREPLEAS

Summary

Description
Utilization of purines as secondary nitrogen sources, when primary sources are limiting.
Catalytic Activity
allantoate + H2O = (S)-ureidoglycolate + urea
Similarity
Belongs to the allantoicase family.
Keywords
Complete proteome   Hydrolase   Reference proteome   Alternative splicing   Polymorphism   Purine metabolism  
Feature
chain  Probable allantoicase
splice variant  In isoform 2.
EC Number
3.5.3.4
EMBL
BABH01023333    BABH01023334    AGBW02014553    OWR41445.1    NWSH01002108    PCG69157.1    + More
KZ150019    PZC74932.1    ODYU01001289    SOQ37297.1    RSAL01000121    RVE46686.1    KQ459185    KPJ03391.1    KQ461198    KPJ05994.1    JTDY01003083    KOB70178.1    GFDL01005081    JAV29964.1    DS232261    EDS38645.1    EF676028    ABV44608.1    JXUM01102942    KQ564765    KXJ71772.1    CH478177    EAT33678.1    BABH01023327    BABH01023328    BABH01023329    AFYH01173098    HF678437    CCT61360.1    UFQT01000107    SSX20088.1    GEZM01085131    GEZM01085128    JAV60199.1    GEZM01085130    GEZM01085127    JAV60204.1    AGCU01012892    AGCU01012893    AY269784    AAP41914.1    GDRN01061077    JAI65250.1    GDRN01061079    JAI65249.1    JW867994    AFP00512.1    JH817383    EKC35614.1    ACTA01160405    AMGL01046754    AMGL01046755    AMGL01046756    AAEX03010658    BC112648    JH880525    ELR60907.1    AEFK01026488    AEFK01026489    FR904338    CDQ59942.1    JNBS01002484    OQR90848.1    AC125638    AJFE02021545    AJFE02021546    AJFE02021547    AJFE02021548    AHZZ02004863    JH331173    EHH62350.1    JSUE03010094    JH290552    EHH25475.1    AB168232    AHAT01032617    AMQN01002899    KB310391    ELT91657.1    BC078971    AF480062    AQIB01029823    AQIB01029824    CABD030014495    CABD030014496    CABD030014497    CABD030014498    CABD030014499    AQIA01019275    AF278712    AC165283    BC108957    BC108958    CH466526    AAI08959.1    EDL36958.1    AF215924    AK302299    AC010907    CH471053    BC029652    BC035356    AF395820    BAG63639.1    EAX01050.1    GG666476    EEN66474.1    AACZ04027933    AACZ04027934    NBAG03000227    PNI72871.1    NDHI03003569    PNJ20111.1    KK583199    KDO31140.1    BC164715    AAI64715.1    BX276180    BC076445    AANG04003329    AGTP01047541    AGTP01047542    AGTP01047543    AGTP01047544    JH767170    EQC31218.1    AAQR03147187    ADFV01095359    JNBR01000621    OQR90489.1    NEDP02002410    OWF50986.1    AF153230    BC060404    ABGA01087188    ABGA01303696    ABGA01303697    ABGA01303698    ABGA01303699    ABGA01303700    ABGA01303701    ABGA01303702    ABGA01303703    ABGA01330241    CM004474    OCT81201.1   
Pfam
PF03561   Allantoicase        + More
PF03607   DCX
Interpro
IPR008979   Galactose-bd-like_sf        + More
IPR015908   Allantoicase_dom       
IPR005164   Allantoicase       
IPR036572   Doublecortin_dom_sf       
IPR003533   Doublecortin_dom       
SUPFAM
SSF49785   SSF49785        + More
SSF89837   SSF89837       
Gene 3D
PDB
1SG3     E-value=1.38899e-24,     Score=278

Ontologies

Topology

Length:
253
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.19588
Exp number, first 60 AAs:
0.09126
Total prob of N-in:
0.04246
outside
1  -  253
 
 

Population Genetic Test Statistics

Pi
21.923858
Theta
18.036051
Tajima's D
0.099954
CLR
1.506179
CSRT
0.4032798360082
Interpretation
Possibly Positive selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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