SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04862
Annotation
PREDICTED:_allantoicase-like_[Amyelois_transitella]
Full name
Allantoicase       + More
Probable allantoicase      
Alternative Name
Allantoate amidinohydrolase
Location in the cell
Cytoplasmic   Reliability : 1.058 Nuclear   Reliability : 1.543
 

Sequence

CDS
ATGGCTGATGGGTGGGAGACGGCGAGAAGGGCGGATAGGCCCGAGATCATCGAAGAGAATGATGATGGAACTCTGAGGTTTTCAGGCAACGAGTGGGCAGTCTACAAATTAGGTTTCGCTGGTACAATAAGAAGAGTGTGCATTGACACAACACATTTCAAAGGCAATTATCCAGATCATATCAGGATTGAAGGCTGCAATTTGGGACAGAATGATTGGGATAATCAATCCAATAACGAATGTAATTGGAGAAGCATATTGGTACCGAGCAAGGTAAGAAATTGA
Protein
MADGWETARRADRPEIIEENDDGTLRFSGNEWAVYKLGFAGTIRRVCIDTTHFKGNYPDHIRIEGCNLGQNDWDNQSNNECNWRSILVPSKVRN

Summary

Description
Utilization of purines as secondary nitrogen sources, when primary sources are limiting.
Catalytic Activity
allantoate + H2O = (S)-ureidoglycolate + urea
Similarity
Belongs to the allantoicase family.
Keywords
Alternative splicing   Complete proteome   Hydrolase   Purine metabolism   Reference proteome  
Feature
chain  Allantoicase
splice variant  In isoform 2.
EC Number
3.5.3.4
EMBL
ODYU01001289    SOQ37297.1    RSAL01000121    RVE46686.1    KZ150019    PZC74932.1    + More
NWSH01002108    PCG69157.1    GAIX01014086    JAA78474.1    KQ461198    KPJ05994.1    KQ459185    KPJ03391.1    AGBW02014553    OWR41445.1    BABH01023327    BABH01023328    BABH01023329    JH817383    EKC35614.1    GBYB01007670    JAG77437.1    AY269784    AAP41914.1    AAGJ04010450    BX276180    BC076445    BC164715    AAI64715.1    JARO02000371    KPP78802.1    GBYB01014020    JAG83787.1    PYGN01001921    PSN32141.1    GEZM01085131    GEZM01085128    JAV60199.1    GEZM01085132    GEZM01085129    JAV60201.1    RJVU01072567    ROI33889.1    GEZM01085130    GEZM01085127    JAV60204.1    DS469813    EDO32648.1    QCYY01002635    ROT68777.1    AGCU01012893    HAEJ01019217    SBS59674.1    AHAT01032617    RAZU01000241    RLQ63260.1    GDRN01061079    JAI65249.1    GCES01035868    JAR50455.1    AERX01016628    KF137576    AGO86379.1    FR904338    CDQ59942.1    GDRN01061077    JAI65250.1    JH001181    EGW10652.1    AAQR03147187    GL194142    EFB16901.1    AHZZ02004863    AYCK01010430    ACTA01160405    GCES01151207    JAQ35115.1    JXUM01102942    KQ564765    KXJ71772.1    GCES01157276    JAQ29046.1    JH331173    EHH62350.1    JSUE03010094    JH290552    EHH25475.1    AB168232    GCES01035871    JAR50452.1    LJIG01001039    KRT85901.1   
Pfam
PF03561   Allantoicase        + More
PF01251   Ribosomal_S7e
PF01391   Collagen
PF00059   Lectin_C
Interpro
IPR008979   Galactose-bd-like_sf        + More
IPR015908   Allantoicase_dom       
IPR005164   Allantoicase       
IPR033990   Collectin_CTLD       
IPR008160   Collagen       
IPR016187   CTDL_fold       
IPR018378   C-type_lectin_CS       
IPR001304   C-type_lectin-like       
IPR016186   C-type_lectin-like/link_sf       
IPR000554   Ribosomal_S7e       
SUPFAM
SSF49785   SSF49785        + More
SSF56436   SSF56436       
Gene 3D
PDB
1O59     E-value=1.17485e-06,     Score=118

Ontologies

Topology

Length:
94
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00727
Exp number, first 60 AAs:
0.00727
Total prob of N-in:
0.57760
inside
1  -  94
 
 

Population Genetic Test Statistics

Pi
104.775061
Theta
82.8106
Tajima's D
0.830265
CLR
0
CSRT
0.619869006549672
Interpretation
Uncertain
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