SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04859
Pre Gene Modal
BGIBMGA008030
Annotation
PREDICTED:_allantoicase-like_[Amyelois_transitella]
Full name
Probable allantoicase       + More
Allantoicase      
Alternative Name
Allantoate amidinohydrolase
Location in the cell
Cytoplasmic   Reliability : 1.967
 

Sequence

CDS
ATGACTGAAAATTTACCGACGTTTATAAATTTAACTGAATTCGCCACAAGTAACACTGGTGGACAAATACTGTTCGCTACAGATGATTTCTTCGCCGTTGCCGAGAATTTAATCTCCGACACGGATCCGATATACATAGCTGATAAATACACGGAGTACGGTAAATGGATGGACGGGTGGGAGACCAGACGGAAGAGGATCCCGGGACACGACTGGTGCATCATCAAGCTTGCTGTGGCTTGTGTTATCAAAGGCTTATTGTTAGACACGGCTCACTTCACAGGCAACAATGTACTGAAGTTTTCCATTCAAGCGACTATATTGTCTTCTGAAGAAGAATTGCAAATCCCACCCAGAAACACGACAGTAGGATCTGGTGCTAGTGCAGAAGATTTAGATAGAGTCGAAGAGATTTTTTCTGAAAAATGGAAAGAGATTGTACCTGTCACTTCTCTTAGACCGGGGCTCGAAGTTACCCGGTATAATTACGTAAAGGTTTTTAGTAATAAGCCCTGGACACATATCCGCTTAAACATTTATCCTGATGGTGGAATCGCCAGATTGAGAGTGTACGGTGAAGCGAGTCCAGAAAAACCACCCGCAAATGAACTAACTGACTTGGTGTCAATGTTGAACGGTGGAGTTAATCAAGGCTATTCCAATGCACACTATAGCCACCCTAGAAATATTTTGAAGCCATTCAAAGGTGTCTCAATGTCTGATGGATGGGAGACAGCCAGGAATCAAAACAGACCAGCAATTATTGAACTGAACGAAGACGGGACGTTAAATGTTAATGTCAGTGAATGGGCAATATTCAAGCTTGGTTTTCCTGGATCACTAAGAAGGATTTGCGTAGACACATCGCATTTCAAGGGAAACTATCCAGGTGATGTGAAAATCGAAGGAGCATATTTGGAAAAAGAAAATTGGTTTCCAGGAGACAAAGTGGGTTGGACTTCCGTTTTAAAACAGAATCCGCTCGAGGGAGACAAGGAGCATTGGTTTGATTGTGAATCTGATGTCATTACTCACATCAAAGTAACAATATCTCCGGACGGCGGGATCAGCAGACTACGGACATTTGGTTACATTTCTCCTTTCTAA
Protein
MTENLPTFINLTEFATSNTGGQILFATDDFFAVAENLISDTDPIYIADKYTEYGKWMDGWETRRKRIPGHDWCIIKLAVACVIKGLLLDTAHFTGNNVLKFSIQATILSSEEELQIPPRNTTVGSGASAEDLDRVEEIFSEKWKEIVPVTSLRPGLEVTRYNYVKVFSNKPWTHIRLNIYPDGGIARLRVYGEASPEKPPANELTDLVSMLNGGVNQGYSNAHYSHPRNILKPFKGVSMSDGWETARNQNRPAIIELNEDGTLNVNVSEWAIFKLGFPGSLRRICVDTSHFKGNYPGDVKIEGAYLEKENWFPGDKVGWTSVLKQNPLEGDKEHWFDCESDVITHIKVTISPDGGISRLRTFGYISPF

Summary

Description
Utilization of purines as secondary nitrogen sources, when primary sources are limiting.
Catalytic Activity
allantoate + H2O = (S)-ureidoglycolate + urea
Similarity
Belongs to the allantoicase family.
Keywords
Complete proteome   Hydrolase   Reference proteome   Purine metabolism   Alternative splicing   Polymorphism  
Feature
chain  Probable allantoicase
splice variant  In isoform 2.
EC Number
3.5.3.4
EMBL
BABH01023327    BABH01023328    BABH01023329    RSAL01000121    RVE46686.1    ODYU01001289    + More
SOQ37297.1    AGBW02014553    OWR41445.1    KZ150019    PZC74932.1    NWSH01002108    PCG69157.1    KQ461198    KPJ05994.1    KQ459185    KPJ03391.1    EF676028    ABV44608.1    CH478177    EAT33678.1    UFQT01000107    SSX20088.1    JXUM01102942    KQ564765    KXJ71772.1    DS232261    EDS38645.1    GFDL01005081    JAV29964.1    AEFK01026488    AEFK01026489    JH817383    EKC35614.1    HF678437    CCT61360.1    GEZM01085130    GEZM01085127    JAV60204.1    AFYH01173098    ACTA01160405    DS469813    EDO32648.1    AAEX03010658    GDRN01061079    JAI65249.1    JW867994    AFP00512.1    QCYY01002635    ROT68777.1    AANG04003329    AAQR03147187    KK583199    KDO31140.1    AY269784    AAP41914.1    BC112648    AMGL01046754    AMGL01046755    AMGL01046756    JH880525    ELR60907.1    NEDP02002410    OWF50986.1    JNBS01002484    OQR90848.1    JH767170    EQC31218.1    AHZZ02004863    AF153230    BC060404    AJFE02021545    AJFE02021546    AJFE02021547    AJFE02021548    CM004474    OCT81201.1    JNBR01000621    OQR90489.1    JH331173    EHH62350.1    JSUE03010094    JH290552    EHH25475.1    AB168232    CABD030014495    CABD030014496    CABD030014497    CABD030014498    CABD030014499    BC078971    AF480062    AQIA01019275    AMQN01002899    KB310391    ELT91657.1    AACZ04027933    AACZ04027934    NBAG03000227    PNI72871.1    NDHI03003569    PNJ20111.1    AF215924    AK302299    AC010907    CH471053    BC029652    BC035356    AF395820    BAG63639.1    EAX01050.1    AAWZ02025517    AQIB01029823    AQIB01029824    ADMH02002016    ETN59981.1    AAMC01040407    AAMC01040408    AAMC01040409    AAMC01040410    AF278712    AC165283    AAKN02047258    BC082508    AF480058    BC108957    BC108958    CH466526    AAI08959.1    EDL36958.1    AGTP01047541    AGTP01047542    AGTP01047543    AGTP01047544    APCN01005395    FR904338    CDQ59942.1    ABGA01087188    ABGA01303696    ABGA01303697    ABGA01303698    ABGA01303699    ABGA01303700    ABGA01303701    ABGA01303702    ABGA01303703    ABGA01330241    GEZM01085131    GEZM01085128    JAV60199.1    AAAB01008898    EAA09264.6    AKHW03003826    KYO32936.1    ADFV01095359    CYRY02044622    VCX39656.1    AEYP01018654    AEYP01018655    AEYP01018656    GGFK01006246    MBW39567.1   
Pfam
PF03561   Allantoicase
Interpro
IPR008979   Galactose-bd-like_sf        + More
IPR015908   Allantoicase_dom       
IPR005164   Allantoicase       
SUPFAM
SSF49785   SSF49785       
Gene 3D
PDB
1O59     E-value=1.35616e-51,     Score=512

Ontologies

Topology

Length:
368
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.24191
Exp number, first 60 AAs:
0.02036
Total prob of N-in:
0.06182
outside
1  -  368
 
 

Population Genetic Test Statistics

Pi
2.968717
Theta
58.219695
Tajima's D
-1.625016
CLR
53.759534
CSRT
0.0434478276086196
Interpretation
Possibly Positive selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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