SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04854  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008044
Annotation
PREDICTED:_uncharacterized_protein_LOC105386825_[Plutella_xylostella]
Location in the cell
PlasmaMembrane   Reliability : 1.657
 

Sequence

CDS
ATGATTAGGAATATAATACGTACCGGCCGGTGGCTGGTGCGGCTGCAAATCAATAGTCTCGCCCCCATCGCGATACGAAAAAGCAGTAGTATACTAAAAGACTTCAGACTGAATGTTAGTTGTGGTTTTAATAACCGAAGATTATCTGATAATATCCGCAATGAAGAGGAACCTCTAGTATTTGAAGAGGCTTGCAACGAGACCTTAGAGTCGCTGTGTGATTTTTTTGAGCAGTTAATCGAAGATGCACCGAATTTGAAAGGAGCTGACGTAACATACAGCGATGGTGTATTAACCATATCATTAGGAAAGCACGGGACATATGTGATAAACCGGCAGATACCAAATAAACAGATTTGGATCCCAATTTTGTTGCAAAGAGATTTGGAGTATTATCAGAAAAACCAAACAGTTTTGTCGGAGACAATCTGCCGCAGTGTAGTCGGTGGTAGACTCGATTTCCCTAGGAACGCTTCTTTCGCTGCTGTCAAAATAGTGCTATGGCTAGAAGAGGAGTTTTCGATTGCTTTCAAACAAGGTTCTGGAATGTTCGTGAACACCGAAGAAGAAGAAGAGAAACTAGAAGGCGGAGTGGCGAAGACTTCTGATCCGGATAAATTCGTACAGTTGACCGTCAAGTCGAGTGACGCGCTGTTAGAGCATCTCCACATGTTGGTGCAAGAGGCACTGGACCACGCCGACCTCCCGGTGCTGACCGCCACCCTGGGAGCCGCAGCACTGCTTAAAAACAGTCTGTATTGCTACTTACAGCACGTGGAAGACTCTGGCAACGCTGAAAGATTCTCTATATTGCAACTACGTGGTCTCGGCTGGTATACAAGTGTTCATTTATTGGTTGTGTATTTTAAAATTTTGTTCGCGTTCACATTGTGA
Protein
MIRNIIRTGRWLVRLQINSLAPIAIRKSSSILKDFRLNVSCGFNNRRLSDNIRNEEEPLVFEEACNETLESLCDFFEQLIEDAPNLKGADVTYSDGVLTISLGKHGTYVINRQIPNKQIWIPILLQRDLEYYQKNQTVLSETICRSVVGGRLDFPRNASFAAVKIVLWLEEEFSIAFKQGSGMFVNTEEEEEKLEGGVAKTSDPDKFVQLTVKSSDALLEHLHMLVQEALDHADLPVLTATLGAAALLKNSLYCYLQHVEDSGNAERFSILQLRGLGWYTSVHLLVVYFKILFAFTL

Summary

Uniprot
Pfam
PF14906   DUF4495        + More
PF01491   Frataxin_Cyay
Interpro
IPR017789   Frataxin        + More
IPR036524   Frataxin/CyaY_sf       
IPR020895   Frataxin_CS       
IPR002908   Frataxin/CyaY       
IPR027993   DUF4495       
Gene 3D
ProteinModelPortal
PDB
3T3X     E-value=4.46356e-11,     Score=162

Ontologies

Topology

Length:
297
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
17.87609
Exp number, first 60 AAs:
0.00407
Total prob of N-in:
0.43258
outside
1  -  297
 
 

Population Genetic Test Statistics

Pi
221.748253
Theta
166.663827
Tajima's D
1.056435
CLR
0.218163
CSRT
0.67831608419579
Interpretation
Uncertain
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