SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04850  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008042
Annotation
PREDICTED:_carbonic_anhydrase_2-like_[Papilio_polytes]
Location in the cell
Cytoplasmic   Reliability : 1.378 Extracellular   Reliability : 1.27
 

Sequence

CDS
ATGTCTCATGTCACGGCGGCCGAGCACATTTCAAGATTAAGACCTTCACAATCACCGATTGCTATATCATTGAGCCGGTGTCCGACTTGGTCTTCGCTCGATCCTCTCAAGTTCAAGGGATATTGGGACAGCAACGCTAACGCCATACTTTTAAATAATGGATCTACTGCATATTTCACGTTCAACGACGCGTCAGTGAGACCGACCCTCAGCGGGGGCCCCCTGATCGGAGAGTACATCTTCGAGCAGATGCACTTCCACTGGTCCGTAGATGACTTCACCGGATGCGAGCACGTGCTCGATGGCCACGGGTACGCCGCAGAATGCCACTTCGTCCACTATAACAGTAAATACGAATCCTTGGAGACGGCGGTGGGCCATCCCGATGGATTGGCTGTGGTCGGATTCCTCCTGGAGACTGTCGACGCTCCCAACCCGAGGTTCGATAGACTAGTACAAGGTCTGGAGGGGATTCAGAAGAGGGAGTCAGTCATGAATGTTACTTCAGAATCCCTATTATGGATGGACAGAGAAGACCTTCAAATCGGCAACTACGTGACTTACAAGGGCTCCCTGACGACACCGCCCTACACCGAGTGTGTCACTTGGATCATTTACGAGAAACCTGTACAAATTGGTTCCGAACAGCTGGGTCTACTTCGACAACTTGAGGGGCCGGACAGTCAACCCATTGAGAGAAACGTTCGTCCGACCCAGAGACACCCGCCGGGCCACTCCGTTATTTACGTTAAGCAAGTTAGGTCAAAACTCTGA
Protein
MSHVTAAEHISRLRPSQSPIAISLSRCPTWSSLDPLKFKGYWDSNANAILLNNGSTAYFTFNDASVRPTLSGGPLIGEYIFEQMHFHWSVDDFTGCEHVLDGHGYAAECHFVHYNSKYESLETAVGHPDGLAVVGFLLETVDAPNPRFDRLVQGLEGIQKRESVMNVTSESLLWMDREDLQIGNYVTYKGSLTTPPYTECVTWIIYEKPVQIGSEQLGLLRQLEGPDSQPIERNVRPTQRHPPGHSVIYVKQVRSKL

Summary

Similarity
Belongs to the alpha-carbonic anhydrase family.
EMBL
BABH01023309    BABH01023310    BABH01023311    BABH01023312    KZ150019    PZC74923.1    + More
NWSH01001366    PCG71519.1    KQ461198    KPJ06004.1    KQ459185    KPJ03399.1    AGBW02004596    OWR55390.1    ODYU01002356    SOQ39744.1    NWSH01005409    PCG64237.1    KZ150067    PZC74129.1    JXUM01029962    JXUM01029963    JXUM01029964    JXUM01029965    GAPW01003562    KQ560869    JAC10036.1    KXJ80553.1    CH477346    EAT42998.1    EJY57590.1    DS232152    EDS36195.1    GFDL01006916    JAV28129.1    AXCN02000954    KQ971312    EEZ98179.1    ATLV01024013    KE525348    KFB50322.1    AY280613    AAAB01008900    AAQ21366.1    EAA09468.3    APCN01002969    AAAB01008400    EAA03371.4    AXCM01005738    APGK01030408    APGK01030409    BT126535    KB740771    KB632375    AEE61499.1    ENN78981.1    ERL93862.1    ADMH02002104    ETN59066.1    CVRI01000010    CRK88750.1    CH916371    EDV91697.1    CH940651    EDW65460.1    KRF82241.1    CP012528    ALC48701.1    KA645850    AFP60479.1    CH933810    EDW07037.1    OUUW01000015    SPP88605.1    CH902635    EDV33736.2    KPU74729.1    KPU74730.1    CH479192    EDW26492.1    CH379064    EAL32032.1    KRT06788.1    CM000162    EDX02224.1    GAKP01008952    JAC50000.1    CH963738    EDW72136.1    CM000366    EDX17439.1    CH480850    EDW51351.1    AE014298    AY069607    AAF46402.1    AAL39752.1    AGB95192.1    GBXI01013509    GBXI01000691    JAD00783.1    JAD13601.1    GAMC01007020    GAMC01007019    JAB99536.1    CH954180    EDV46339.1    AJVK01033737    AJVK01033738    CAQQ02161122    CAQQ02161123    APCN01001344    JXJN01017114    AAAB01008846    EAA06713.4    CCAG010018936    JRES01000336    KNC32177.1    GFDF01008942    JAV05142.1    GFDF01008943    JAV05141.1    KV922996    PIN97164.1    GDAI01001914    JAI15689.1    PIN97165.1    AGCU01018659    AGCU01018660    AXCM01000769    KL409868    KFQ92609.1    KL224729    KFW62997.1    KK840822    KFP83321.1    ATLV01017849    KE525195    KFB42550.1    KL225953    KFM05341.1    KK634529    KFV57570.1    AKCR02000001    PKK34127.1    AJWK01020126    AJWK01020127    LSYS01003169    OPJ83621.1    KL462937    KFV14321.1    FR905752    CDQ81390.1    KK759294    KFP44340.1    KK467158    KFQ82490.1    ADON01001530    ADON01001531    ADON01052734    ADON01052735    KL447477    KFO74084.1    KB742403    EOB08991.1    ABQF01005621    KK673224    KFQ06722.1   
Pfam
PF00194   Carb_anhydrase
Interpro
IPR036398   CA_dom_sf        + More
IPR023561   Carbonic_anhydrase_a-class       
IPR001148   CA_dom       
IPR018338   Carbonic_anhydrase_a-class_CS       
IPR018441   Carbonic_anhydrase_CA3       
SUPFAM
SSF51069   SSF51069       
Gene 3D
PDB
6B00     E-value=5.31045e-38,     Score=393

Ontologies

Topology

Length:
257
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0116
Exp number, first 60 AAs:
0.00725
Total prob of N-in:
0.07013
outside
1  -  257
 
 

Population Genetic Test Statistics

Pi
306.126664
Theta
180.373048
Tajima's D
1.826278
CLR
0.616169
CSRT
0.852057397130144
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 EDLQIGNYVTYK 100.00 5e-05
28556443 LLETVDAPNPR 100.00 5e-05
28556443 PVQIGSEQLGLLR 100.00 6e-04
28556443 ESVMNVTSESLLWMDR 100.00 0.035
28556443 QQLDGDSLSPDSR 100.00 0.035
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号