Silkworm Genome Informatics Database

Gene

KWMTBOMO04846

Annotation

PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]

Location

Bomo_Chr9(-):171258-173225 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.47

CDS

ATGACAAAGCCTCGCACACGTCGTCAGTCTCGTCGACAATCCGAGTATTTTGAACCGACAGAGGACGATTCTTCCCCGCCGCCGACTGCATCGGGAAACATTTCCGTCAACGACATGGTCGCCATGATGTCTACGTGGCAACGCAACCAAGAGGAAACGTTTGAGAAACTTCTACATACAGTTCTCAACCAATCGCACCGGTCATCGCCGCCGCCCGCTCAACCTGCACTTGGAAACTTCGCCTCGTGCAAGGCTCGCTACAGCGGAGCGCCAGACGAATCACTTGACGGATTTATAGACGCCGTAGAGGCCTACAAGGAATGTGCAAACGTAAGCGAAACTAATGCACTACGTGGGTTGTCAATGTTGTTAACTCATGAAGCCGCGACATGGTGGCAAGGAGTTAAGACCACCATGAACAAGTGGGACCACGCCCTCACATCCCTAAGAGGTGCGTTTGGTGATAGCCGACCTCCACATCGTATATACAAGGAGCTGTTCGCCAACCCACAAAAAGCAAGTGAGAAAACAGAACTCTTCATCTCTAAAACTCGAGCGCTACTATCACGTCTGCCAAAGGACGATCTGACAACCAAAGTACAGATGGACATGGTGTATGGACTACTACATAGTAAAATACGCGAGCGTTTGAGAAGAGAGGAGATTGACACATTTGACACGCTACTCAGAAAGTCTAGAGAGATAGAAGAATCTTGTGACGAGAGTCTATCAACTAGTGGCCTTCAGAGCAAACTGCGCCAACGACAGTTTCCACCGCCTCGTCATGCCGCAAGCATCGCCGCTGTCCAGGGGTCAACGACCGCGCCACCACTACCACCGCAGAGCGCGCCTAAGCCGCCTGCGCCCGCCGTTGAGTCCAGCGCCCACGGCACCTATCGCCGTTCTCTTCGCTGCTCCGTGGTGCCGCCCCCACCGTCGTCTCCACAACCCCACGGCTCTTCTACTCAGTTCGTGAACGCCAGACGTCGATATTGTTTCTATTGCAAGAACTATGGACATACACGTGAAGAGTGTCGTAGGTTAGCAGCTAAAGGCAAACAGGACATCGATAACGCCGCCGACCCCGTCCCGTCGTGTTACGGATGCAACGAGAAAGGTGTCACTCGATCACAGTGTGCTAAATGCAATTCGGACTTCTCTGCGTGTGAATACGACGGTCCGAAAGGCGCGCTGATGGGAATTTACGGTACAAGGTACTCCACCACTGTTATCAAATCATCTTGTAATAAGGATGAGACCCAGGTTGACCATGCAGGACGATTGTAA

Protein

MTKPRTRRQSRRQSEYFEPTEDDSSPPPTASGNISVNDMVAMMSTWQRNQEETFEKLLHTVLNQSHRSSPPPAQPALGNFASCKARYSGAPDESLDGFIDAVEAYKECANVSETNALRGLSMLLTHEAATWWQGVKTTMNKWDHALTSLRGAFGDSRPPHRIYKELFANPQKASEKTELFISKTRALLSRLPKDDLTTKVQMDMVYGLLHSKIRERLRREEIDTFDTLLRKSREIEESCDESLSTSGLQSKLRQRQFPPPRHAASIAAVQGSTTAPPLPPQSAPKPPAPAVESSAHGTYRRSLRCSVVPPPPSSPQPHGSSTQFVNARRRYCFYCKNYGHTREECRRLAAKGKQDIDNAADPVPSCYGCNEKGVTRSQCAKCNSDFSACEYDGPKGALMGIYGTRYSTTVIKSSCNKDETQVDHAGRL

Uniprot

A0A0L7L2Z3 A0A2W1B5D1 A0A2A4J1V9 A0A2A4JSD7 A0A2A4IXZ6 A0A0L7KWD2 + More

Pubmed

26227816 28756777

EMBL

JTDY01003352 KOB69686.1 KZ150309 PZC71472.1 NWSH01004191 PCG65373.1 + More
NWSH01000724 PCG74608.1 NWSH01004894 PCG64601.1 JTDY01004939 KOB67577.1

Proteomes

UP000037510 UP000218220

Pfam

PF00077 RVP

Interpro

IPR036875   Znf_CCHC_sf        + More
IPR021109   Peptidase_aspartic_dom_sf
IPR001878   Znf_CCHC
IPR001969   Aspartic_peptidase_AS
IPR018061   Retropepsins

SUPFAM

SSF57756 SSF57756 + More
SSF50630 SSF50630

Gene 3D

2.40.70.10

ProteinModelPortal

A0A0L7L2Z3 A0A2W1B5D1 A0A2A4J1V9 A0A2A4JSD7 A0A2A4IXZ6 A0A0L7KWD2 + More

KEGG

101740708 no KO assigned | (RefSeq) uncharacterized LOC101740708

GO

GO:0003676 GO:0008270 GO:0004190 GO:0007156 GO:0005524 GO:0005886 GO:0007166 GO:0006032 GO:0005515 GO:0016742 GO:0003824

Length:

428

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00812999999999999

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.06123

outside

1 - 428

Pi

222.295068

Theta

161.056708

Tajima's D

1.129358

CLR

0

CSRT

0.693015349232538

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree