SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04840
Pre Gene Modal
BGIBMGA008039
Annotation
neuropeptide_receptor_A32_[Bombyx_mori]
Full name
Tachykinin-like peptides receptor 86C      
Location in the cell
PlasmaMembrane   Reliability : 4.937
 

Sequence

CDS
ATGGATCCTCGCAGCTTACTCCATCAGTCCAAGCACAGTAGTGCGCCAGTAATGGACGCGATGTTCAACATTACAGCAGAGCGTCAGAAGTTCTACGCTAGTGCAGCCTTCAAGGACATGTCTAAGAATAAAGACGTAGAGGTGGTGTACACTTGGGAGATGGACTTGAACCGCAGCCTGCTGGGCGCGTCAACGATCCTGGTCCCCCGCGCGACCACCGCCAGCCCCCCCGCCCCCCTCATGCCGCCCTGGGCACACAACTCCTGGATCTGCGTCTTCTCTATCATGCTCATTATAGCCGTCGGAGGAAACGCTATAGTCATATGGATTGTGATCGCTCACAAGCGCATGCGCACGGTGACCAACTACTTCCTCGTGAACCTGTCGCTGGCGGACCTCATGATGTCCGCGCTCAACTGCCTCTTCAACTTCATCTACATGCTCCACAGTGACTGGGTGTTCGGGCTGCAGTACTGCAAGATCAGCAACTTCATCGCGAACGTGACAGTGGCTGCCAGCGTGTTCACGCTCACGGGGATATCCTTCGACAGGTTCCAAGCGATCGTGCGTCCGATGCGGCCGCGCATGTCCAAGACCTGCTCTCTGATCGCGATCGGCGGGATCTGGCTCGGCGGGATGGTGCTCGCCACGCCCTACCTGCTCTACTCCACCACCAAGGAATACAAGTCAAGAGTTGGAGTGAAGACTGCCTGTCTGTTGGTTTGGCCAGATGGCATGCCCGATGTCTCCAAAATGGACTTCGTCTACCAAATAGCGTTTTTCATCGTGACGTACGCCGTGCCGATGGTGGGGATGTCGTTCTTCTACACCGCGATGGGCAGAGAGCTGTGGGGATCCAGGACCATCGGAGAGCTCACGCAACGACAGCTCGATTCTATTAAATCTAAGCGCAAGGTAGTGAAGATGTTCATCCTGGTGATTGTGATATTCGGTATCTGCTGGTTCCCGTACCACGGATACTTCATCTACACGCATCTGGACTCCTCGATCCTGTACTCCCGCTACGTGCAGCACGTCTACCTCGGCTTCTACTGGCTCGCCATGTCTAACGCCATGGTCAACCCCATCATATACTACTGGATGAACGCCAAGTTCAGGAGCTACTTCCGCATGGCGATCATGTGCCGGTGGCTGGAGGTGATGTGGAGGCGCCGCCACCCCCTGGACTCACCCCCCGAGTGTCCGTCCCAGTCCAACACTAGATCCCGATCAGGTTTTTACTCGTTAACGTAA
Protein
MDPRSLLHQSKHSSAPVMDAMFNITAERQKFYASAAFKDMSKNKDVEVVYTWEMDLNRSLLGASTILVPRATTASPPAPLMPPWAHNSWICVFSIMLIIAVGGNAIVIWIVIAHKRMRTVTNYFLVNLSLADLMMSALNCLFNFIYMLHSDWVFGLQYCKISNFIANVTVAASVFTLTGISFDRFQAIVRPMRPRMSKTCSLIAIGGIWLGGMVLATPYLLYSTTKEYKSRVGVKTACLLVWPDGMPDVSKMDFVYQIAFFIVTYAVPMVGMSFFYTAMGRELWGSRTIGELTQRQLDSIKSKRKVVKMFILVIVIFGICWFPYHGYFIYTHLDSSILYSRYVQHVYLGFYWLAMSNAMVNPIIYYWMNAKFRSYFRMAIMCRWLEVMWRRRHPLDSPPECPSQSNTRSRSGFYSLT

Summary

Description
Receptor for tachykinin-like peptides.
Similarity
Belongs to the G-protein coupled receptor 1 family.
Keywords
Cell membrane   Complete proteome   G-protein coupled receptor   Glycoprotein   Membrane   Receptor   Reference proteome   Transducer   Transmembrane   Transmembrane helix  
Feature
chain  Tachykinin-like peptides receptor 86C
EMBL
BABH01023292    BABH01023293    BABH01023294    BABH01023295    AB330453    BAG68431.1    + More
KQ459144    KPJ03698.1    AGBW02009032    OWR51816.1    KF192693    KQ971311    AGT29556.1    EEZ99366.2    ACPB03025231    GDIP01186371    JAJ37031.1    GDIQ01198643    JAK53082.1    GDIQ01100290    JAL51436.1    GDIQ01199945    JAK51780.1    GDIQ01230294    JAK21431.1    GDIQ01240033    JAK11692.1    GDIP01138879    JAL64835.1    GDIQ01126131    JAL25595.1    GDIQ01183122    JAK68603.1    GDIQ01241533    JAK10192.1    GDIQ01195642    JAK56083.1    GDIQ01180573    JAK71152.1    GDIQ01069599    JAN25138.1    GDIQ01180574    JAK71151.1    GDIQ01197294    JAK54431.1    GDIQ01170574    JAK81151.1    GDIP01231271    JAI92130.1    GDIP01162384    JAJ61018.1    GDIP01226161    JAI97240.1    GDIQ01065102    JAN29635.1    GDIQ01065103    JAN29634.1    GDIQ01124323    GDIQ01093818    GDIQ01073887    GDIQ01048162    GDIQ01032118    JAL57908.1    GDIQ01235078    GDIQ01173957    GDIQ01168623    GDIQ01136577    GDIQ01107423    JAK83102.1    GDIP01237521    LRGB01000868    JAI85880.1    KZS15710.1    GDIP01080131    JAM23584.1    GDIQ01160969    GDIQ01042464    JAN52273.1    GDIQ01269188    GDIQ01212835    GDIQ01155174    GDIQ01061953    JAN32784.1    GDIP01231272    JAI92129.1    GDIQ01098881    JAL52845.1    GDIP01087931    JAM15784.1    GDIQ01115333    JAL36393.1    GDIQ01115332    JAL36394.1    GDIP01126582    JAL77132.1    GDIQ01027954    JAN66783.1    GDIP01111831    JAL91883.1    GDIP01046482    JAM57233.1    GDIQ01130280    JAL21446.1    GDIQ01218541    JAK33184.1    GDIQ01078786    JAN15951.1    GDIP01097288    JAM06427.1    GDIQ01097382    JAL54344.1    GDIQ01218542    JAK33183.1    GDIQ01080738    JAN13999.1    GDIP01113035    JAL90679.1    GDIQ01066494    JAN28243.1    GDIQ01066495    JAN28242.1    GDIQ01008810    JAN85927.1    GDIP01114388    JAL89326.1    GDIP01201125    JAJ22277.1    GDIP01044807    JAM58908.1    GDIQ01042465    JAN52272.1    GDIP01070492    JAM33223.1    GDIQ01083652    JAN11085.1    GDIQ01131529    JAL20197.1    GDIP01123081    JAL80633.1    GDIQ01212836    JAK38889.1    GDIP01235829    JAI87572.1    GDIQ01217447    JAK34278.1    GDIQ01107424    JAL44302.1    GL732564    EFX77115.1    MG550223    AWT50657.1    GDIQ01242987    JAK08738.1    GDIQ01047143    JAN47594.1    EFX77113.1    GDIP01237617    JAI85784.1    GDIP01011565    JAM92150.1    GDIP01061725    JAM41990.1    GDIQ01019475    JAN75262.1    KZS15706.1    JRES01001097    KNC25564.1    CH964232    EDW80958.1    CH933806    EDW13776.1    GAMC01007028    GAMC01007027    JAB99527.1    CH916374    EDV91282.1    GDIP01063177    JAM40538.1    M77168    AE014297    S80427    CP012526    ALC46519.1    OUUW01000008    SPP83797.1    CM000364    EDX13463.1    CM000160    EDW96830.1    CH954181    EDV49610.1    CH940650    EDW67130.1    BT029262    ABK30899.1    ABW08638.1    GBXI01001966    JAD12326.1    CM000070    EAL29155.2    CH479185    EDW38492.1    UFQS01000013    UFQT01000013    SSW97253.1    SSX17639.1    CH902617    EDV41572.1   
Pfam
PF00001   7tm_1
Interpro
IPR000276   GPCR_Rhodpsn        + More
IPR000611   NPY_rcpt       
IPR017452   GPCR_Rhodpsn_7TM       
IPR001681   Neurokn_rcpt       
PDB
2KSB     E-value=4.71402e-59,     Score=577

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
417
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
157.3796
Exp number, first 60 AAs:
0.08754
Total prob of N-in:
0.02565
outside
1  -  88
TMhelix
89  -  111
inside
112  -  123
TMhelix
124  -  146
outside
147  -  160
TMhelix
161  -  180
inside
181  -  199
TMhelix
200  -  222
outside
223  -  253
TMhelix
254  -  276
inside
277  -  308
TMhelix
309  -  331
outside
332  -  345
TMhelix
346  -  368
inside
369  -  417
 
 

Population Genetic Test Statistics

Pi
254.973563
Theta
185.78364
Tajima's D
1.450506
CLR
0
CSRT
0.770511474426279
Interpretation
Uncertain
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