Gene

KWMTBOMO04828

Pre Gene Modal

BGIBMGA013783

Annotation

AF461149_1_transposase_[Bombyx_mori]

Location

Bomo_Chr8(+):16011712-16012789      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.443

CDS

ATGGAGTGGACGCTTAAAGAAGACCGTGTTGCAGTTATTGCGTTGCATCGTTGCGGTTACGCGCCAATTAAAATTTTTAACATACTGAAAAATTTGAATATAACCAAAAGATTCGTTTATCGTACCATCAAACGATACAGTGAAGACTCTAGTGTAGATGACAGGTCAAGAAGTGGTCGCCCTCGGTCTGTTAGGACTCCAGCAGTGATAAAAGCTGTGAAGGCGCGAATTCAAAGAAATCCCAAACGTAAGCAGAAACTGTTGGCCCTTCAGATGGGGTTAAGCAGAACCACGGTGAAAAGGGTGTTAAATGAAGACTTAGGGCTTCGGGCATATCGAAGAAAAAGAGGACATCGTTTGAATGCTCGTCTAATGGACCTGAGACTGAAGAGATGCCGCGCTTTGTTGAAGCGGTACGCGGGAAAAAAATATCGGGAAATTCTTTTTTCGGATGAAAAATTTTTTACCGTAGAAGAGAGCTACAACAAACAAAATGATAAGGTGTACGCACACAGTAGTGAAGAAGCGAGCAACCGTATTCCGCGTGTCCAACAAGGTCATTTTCCATCCTCGCTCATGGTATGGTTGGGAGTTTCTTATTGGGGCTTAACAGAGGTACATTTTTGTGAGAAAGGTGTAAAAACGAATGCAGTTGTATGTCAAAATACAGTCCTGACGAACCTTGTGGAACCTGTTTCTCATACCATGCTCAATAACAGGCACTGGGTATTCCAACAAGATTCGGCGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCGTGAAATCGACTTCATCCGGCACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCTGTTAGATTACAAGATATAG

Protein

MEWTLKEDRVAVIALHRCGYAPIKIFNILKNLNITKRFVYRTIKRYSEDSSVDDRSRSGRPRSVRTPAVIKAVKARIQRNPKRKQKLLALQMGLSRTTVKRVLNEDLGLRAYRRKRGHRLNARLMDLRLKRCRALLKRYAGKKYREILFSDEKFFTVEESYNKQNDKVYAHSSEEASNRIPRVQQGHFPSSLMVWLGVSYWGLTEVHFCEKGVKTNAVVCQNTVLTNLVEPVSHTMLNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNLLDYKI

Similarity

Belongs to the TGF-beta family.

Uniprot

Q8ITJ9   B1Q3L9   B1Q3L5   B1Q3L8   B9A8E5   A0A3S2LXK8   + More
A0A3S2LTJ6   A0A3S2M6X4   A0A3S2NF68   P90693   G3G3K1   A0A3S2P5Q6   A0A3S2NP17   A0A3S2LQG1   A0A3S2NJ26   A0A3S2NQU1   A0A226D9B6   A0A2S2R6V1   A0A016VJ32   W6NUW0   A0A016WN34   A0A016WY15   H3ETI8   A0A1I7SRX5   A0A016TV39   H3E4E9   A0A1I7SJQ8   E3NJL6   H3EXA9   A0A1I7T5D4   H3FLR7   H3EE07   A0A0N4XXA5   A0A2G5T9N6   E3MXK7   H3E1D2   E3N1H1   E3M1J2   E3NHK7   A0A1I8CC25   E3M897   E3NHD7   H3DS69   H3ESY7   A0A1L5BY18   E3N4H8   E3MQK2   A0A016WKB6   A0A2G5SZY0   H3FF09   E3NDP6   A0A183FUJ2   A0A3P8A0U6   A0A2G5SF52   A0A183G443   A0A3P8B6H1   E3N749   A0A2G5TSG2   A0A2G5VIT1   T2MJK7   A0A368H7I1   A0A2G5TN79   A0A016W3L5   A0A2G5TZM3   H3DZR2   A0A2H2I0K4   A0A016S9F8   A0A2G5TZ20   A0A0N4XTP7   H3FES1   A0A0K9NHE3   E3N6E8   A0A016SXC9   A0A016S0M1   A0A0N4YMQ1   H3FB13  

Pubmed

12653938    9014339    25730766    18806794    21909270    26829753    + More
25527032    24065732    26814964   

EMBL

AF461149    AAN06610.1    AB363028    BAG15927.1    AB363006    AB363010    + More
AB363014    BAG15923.1    BAG15924.1    AB363018    BAG15926.1    AB473770    BAH20555.1    RSAL01000133    RVE46339.1    RSAL01000012    RVE53510.1    RSAL01000022    RVE52367.1    RSAL01000063    RVE49524.1    U47917    AAB47739.1    JF779677    AEO90418.1    RSAL01000016    RVE53060.1    RSAL01000020    RVE52632.1    RSAL01000470    RVE41612.1    RSAL01000677    RVE41245.1    RSAL01000009    RVE53890.1    LNIX01000030    OXA41211.1    GGMS01016485    MBY85688.1    JARK01001345    EYC27589.1    CAVP010059404    CDL95787.1    JARK01000176    EYC41234.1    JARK01000059    EYC44525.1    JARK01001411    EYC06502.1    DS268747    EFP00909.1    UYSL01019905    VDL71189.1    PDUG01000005    PIC23776.1    DS268492    EFP11689.1    DS268508    EFO83264.1    DS268421    EFO88618.1    DS268679    EFO98285.1    DS268428    EFO94379.1    DS268673    EFO98001.1    KX931010    APL98300.1    DS268525    EFO85497.1    DS268466    EFP06959.1    JARK01000255    EYC39473.1    PDUG01000006    PIC20538.1    DS268612    EFO94085.1    UZAH01027257    VDO90094.1    PDUG01000012    PIC13506.1    UZAH01029309    VDP05368.1    DS268545    EFO88382.1    PIC29926.1    PDUG01000001    PIC51673.1    HAAD01005865    CDG72097.1    JOJR01000015    RCN51257.1    PIC28734.1    JARK01001337    EYC34439.1    PDUG01000004    PIC32571.1    JARK01001601    EYB87313.1    PIC32570.1    UYSL01019770    VDL69590.1    LFYR01002220    KMZ56176.1    DS268539    EFO88027.1    JARK01001499    EYB95145.1    JARK01001658    EYB84158.1    UYSL01023444    VDL82193.1   

Proteomes

UP000283053    UP000198287    UP000024635    UP000025227    UP000005239    UP000095284    + More
UP000008281    UP000095282    UP000038043    UP000271162    UP000230233    UP000095286    UP000050761    UP000252519    UP000005237    UP000036987   

PRIDE

Q8ITJ9    B1Q3L9    B1Q3L5    B1Q3L8    P90693   

Pfam

PF00019   TGF_beta        + More
PF00005   ABC_tran
PF01061   ABC2_membrane
PF13358   DDE_3
PF00292   PAX
PF18397   IKBKB_SDD
PF00069   Pkinase
PF00250   Forkhead
PF10320   7TM_GPCR_Srsx

Interpro

IPR009057   Homeobox-like_sf        + More
IPR001839   TGF-b_C       
IPR029034   Cystine-knot_cytokine       
IPR017948   TGFb_CS       
IPR015615   TGF-beta-rel       
IPR013525   ABC_2_trans       
IPR027417   P-loop_NTPase       
IPR003439   ABC_transporter-like       
IPR017871   ABC_transporter_CS       
IPR036388   WH-like_DNA-bd_sf       
IPR038717   Tc1-like_DDE_dom       
IPR001523   Paired_dom       
IPR011009   Kinase-like_dom_sf       
IPR041185   IKBKB_SDD       
IPR029071   Ubiquitin-like_domsf       
IPR000719   Prot_kinase_dom       
IPR036390   WH_DNA-bd_sf       
IPR001766   Fork_head_dom       
IPR030456   TF_fork_head_CS_2       
IPR036906   ATPase_V1_fsu_sf       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
IPR019424   7TM_GPCR_Srsx       

SUPFAM

SSF46689   SSF46689        + More
SSF57501   SSF57501       
SSF52540   SSF52540       
SSF56112   SSF56112       
SSF54236   SSF54236       
SSF46785   SSF46785       

Gene 3D

2.10.90.10     1.10.10.10     3.40.50.10580    

CDD

cd00059  FH

ProteinModelPortal

Q8ITJ9   B1Q3L9   B1Q3L5   B1Q3L8   B9A8E5   A0A3S2LXK8   + More
A0A3S2LTJ6   A0A3S2M6X4   A0A3S2NF68   P90693   G3G3K1   A0A3S2P5Q6   A0A3S2NP17   A0A3S2LQG1   A0A3S2NJ26   A0A3S2NQU1   A0A226D9B6   A0A2S2R6V1   A0A016VJ32   W6NUW0   A0A016WN34   A0A016WY15   H3ETI8   A0A1I7SRX5   A0A016TV39   H3E4E9   A0A1I7SJQ8   E3NJL6   H3EXA9   A0A1I7T5D4   H3FLR7   H3EE07   A0A0N4XXA5   A0A2G5T9N6   E3MXK7   H3E1D2   E3N1H1   E3M1J2   E3NHK7   A0A1I8CC25   E3M897   E3NHD7   H3DS69   H3ESY7   A0A1L5BY18   E3N4H8   E3MQK2   A0A016WKB6   A0A2G5SZY0   H3FF09   E3NDP6   A0A183FUJ2   A0A3P8A0U6   A0A2G5SF52   A0A183G443   A0A3P8B6H1   E3N749   A0A2G5TSG2   A0A2G5VIT1   T2MJK7   A0A368H7I1   A0A2G5TN79   A0A016W3L5   A0A2G5TZM3   H3DZR2   A0A2H2I0K4   A0A016S9F8   A0A2G5TZ20   A0A0N4XTP7   H3FES1   A0A0K9NHE3   E3N6E8   A0A016SXC9   A0A016S0M1   A0A0N4YMQ1   H3FB13  

PDB

5CR4     E-value=1.00963e-05,     Score=116

KEGG

101740752    no KO assigned | (RefSeq) aldo-keto reductase AKR2E4-like

GO

GO:0003677   GO:0005576   GO:0008083   GO:0005524   GO:0016021   GO:0006355   GO:0004672   GO:0003700   GO:0043565   GO:0005634   GO:0034220   GO:0004930   GO:0043022   GO:0016020   GO:0007264   GO:0006003   GO:0006032   GO:0005515   GO:0016742   GO:0003824  

PANTHER

PTHR11848  

Subcellular location

Secreted  
Nucleus  

Length:

288

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.56975

Exp number, first 60 AAs:

0.4709

Total prob of N-in:

0.06963

outside

1  -  288

 

 

Pi

2.287039

Theta

2.58943

Tajima's D

-1.445626

CLR

9.045375

CSRT

0.0564471776411179

Interpretation

Uncertain